RNA–Protein interactions for RNA: ENST00000356663.7

TMEM259-202, Transcript of transmembrane protein 259, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM259, Length 2,748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-202ENST00000356663 DMBT1Q9UGM3 2413 aaPredicted RBP10.92□□□□□ -0.66
TMEM259-202ENST00000356663 KRTAP15-1Q3LI76 137 aa10.91□□□□□ -0.66
TMEM259-202ENST00000356663 SMR3BP02814 79 aaPredicted RBP10.89□□□□□ -0.67
TMEM259-202ENST00000356663 KRTAP21-3Q3LHN1 58 aa10.87□□□□□ -0.67
TMEM259-202ENST00000356663 APOBP04114 4563 aaKnown RBP10.87□□□□□ -0.67
TMEM259-202ENST00000356663 S4R3F8 94 aa10.86□□□□□ -0.67
TMEM259-202ENST00000356663 NDUFAF8A1L188 74 aa10.85□□□□□ -0.67
TMEM259-202ENST00000356663 KRTAP12-2P59991 146 aa10.77□□□□□ -0.69
TMEM259-202ENST00000356663 KRTAP10-4P60372 401 aaPredicted RBP10.77□□□□□ -0.69
TMEM259-202ENST00000356663 FAT1Q14517 4588 aa10.75□□□□□ -0.69
TMEM259-202ENST00000356663 DYNC1H1Q14204 4646 aaKnown RBP10.74□□□□□ -0.69
TMEM259-202ENST00000356663 KMT2CQ8NEZ4 4911 aaKnown RBP10.73□□□□□ -0.69
TMEM259-202ENST00000356663 KRTAP10-8P60410 259 aa10.68□□□□□ -0.7
TMEM259-202ENST00000356663 KRTAP12-1P59990 96 aa10.67□□□□□ -0.7
TMEM259-202ENST00000356663 XP32Q5T750 250 aa10.63□□□□□ -0.71
TMEM259-202ENST00000356663 FAT3Q8TDW7 4589 aa10.63□□□□□ -0.71
TMEM259-202ENST00000356663 RYR2Q92736 4967 aa10.61□□□□□ -0.71
TMEM259-202ENST00000356663 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
TMEM259-202ENST00000356663 HSPG2P98160 4391 aa10.59□□□□□ -0.71
TMEM259-202ENST00000356663 TNXBP22105 4242 aa10.52□□□□□ -0.73
TMEM259-202ENST00000356663 M0QZ58 72 aa10.5□□□□□ -0.73
TMEM259-202ENST00000356663 A0A1B0GVY2 172 aa10.47□□□□□ -0.73
TMEM259-202ENST00000356663 RYR3Q15413 4870 aa10.44□□□□□ -0.74
TMEM259-202ENST00000356663 MYCBP2O75592 4640 aa10.33□□□□□ -0.76
TMEM259-202ENST00000356663 PLAC4Q8WY50 150 aa10.18□□□□□ -0.78
TMEM259-202ENST00000356663 KIAA1109Q2LD37 5005 aa10.12□□□□□ -0.79
TMEM259-202ENST00000356663 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
TMEM259-202ENST00000356663 R4GN34 69 aa10.11□□□□□ -0.79
TMEM259-202ENST00000356663 EPPK1P58107 5090 aaKnown RBP10.1□□□□□ -0.79
TMEM259-202ENST00000356663 Q5VSD8 79 aa10.08□□□□□ -0.8
TMEM259-202ENST00000356663 LPAP08519 4548 aa10.07□□□□□ -0.8
TMEM259-202ENST00000356663 RYR1P21817 5038 aa10.05□□□□□ -0.8
TMEM259-202ENST00000356663 LUZP6Q538Z0 58 aa9.98□□□□□ -0.81
TMEM259-202ENST00000356663 A0A0A0MQY5 61 aa9.96□□□□□ -0.81
TMEM259-202ENST00000356663 LRP2P98164 4655 aa9.94□□□□□ -0.82
TMEM259-202ENST00000356663 MT1HL1P0DM35 61 aa9.89□□□□□ -0.83
TMEM259-202ENST00000356663 PP632Q6XCG6 107 aa9.88□□□□□ -0.83
TMEM259-202ENST00000356663 LORP23490 312 aaPredicted RBP9.81□□□□□ -0.84
TMEM259-202ENST00000356663 KRTAP4-5Q9BYR2 181 aa9.71□□□□□ -0.85
TMEM259-202ENST00000356663 ABCA13Q86UQ4 5058 aa9.67□□□□□ -0.86
TMEM259-202ENST00000356663 CAMK2N1Q7Z7J9 78 aa9.67□□□□□ -0.86
TMEM259-202ENST00000356663 MUC17Q685J3 4493 aa9.54□□□□□ -0.88
TMEM259-202ENST00000356663 SEC61BP60468 96 aaKnown RBP9.53□□□□□ -0.88
TMEM259-202ENST00000356663 KRTAP23-1A1A580 65 aa9.42□□□□□ -0.9
TMEM259-202ENST00000356663 HERC2O95714 4834 aa9.41□□□□□ -0.9
TMEM259-202ENST00000356663 SPRR5A0A1B0GTR4 108 aa9.4□□□□□ -0.9
TMEM259-202ENST00000356663 TNP1P09430 55 aa9.39□□□□□ -0.91
TMEM259-202ENST00000356663 KRTAP4-1Q9BYQ7 146 aa9.36□□□□□ -0.91
TMEM259-202ENST00000356663 KRTAP19-2Q3LHN2 52 aa9.3□□□□□ -0.92
TMEM259-202ENST00000356663 BIRC6Q9NR09 4857 aa9.28□□□□□ -0.92
TMEM259-202ENST00000356663 J3QL48 77 aa9.2□□□□□ -0.94
TMEM259-202ENST00000356663 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
TMEM259-202ENST00000356663 HERC1Q15751 4861 aa9.12□□□□□ -0.95
TMEM259-202ENST00000356663 FLGP20930 4061 aaPredicted RBP9.11□□□□□ -0.95
TMEM259-202ENST00000356663 MUC2Q02817 5179 aa9.11□□□□□ -0.95
TMEM259-202ENST00000356663 PRO2289Q9P1D8 64 aa8.91□□□□□ -0.98
TMEM259-202ENST00000356663 HMCN2Q8NDA2 5059 aa8.81□□□□□ -1
TMEM259-202ENST00000356663 LCE3AQ5TA76 89 aa8.78□□□□□ -1
TMEM259-202ENST00000356663 SPRR2GQ9BYE4 73 aa8.78□□□□□ -1
TMEM259-202ENST00000356663 INE1O15225 51 aa8.76□□□□□ -1.01
TMEM259-202ENST00000356663 RNF213Q63HN8 5207 aa8.71□□□□□ -1.02
TMEM259-202ENST00000356663 KRTAP19-1Q8IUB9 90 aa8.67□□□□□ -1.02
TMEM259-202ENST00000356663 UBR4Q5T4S7 5183 aa8.65□□□□□ -1.02
TMEM259-202ENST00000356663 FAT4Q6V0I7 4981 aa8.63□□□□□ -1.03
TMEM259-202ENST00000356663 KRTAP8-1Q8IUC2 63 aa8.6□□□□□ -1.03
TMEM259-202ENST00000356663 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
TMEM259-202ENST00000356663 M0R2T5 61 aa8.36□□□□□ -1.07
TMEM259-202ENST00000356663 KRTAP12-3P60328 96 aa8.36□□□□□ -1.07
TMEM259-202ENST00000356663 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
TMEM259-202ENST00000356663 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
TMEM259-202ENST00000356663 MT1FP04733 61 aa8.27□□□□□ -1.09
TMEM259-202ENST00000356663 KRTAP10-12P60413 245 aa8.27□□□□□ -1.09
TMEM259-202ENST00000356663 MT2AP02795 61 aa8.25□□□□□ -1.09
TMEM259-202ENST00000356663 KRTAP10-5P60370 271 aa8.25□□□□□ -1.09
TMEM259-202ENST00000356663 MT1HP80294 61 aa8.22□□□□□ -1.09
TMEM259-202ENST00000356663 MT1XP80297 61 aa8.22□□□□□ -1.09
TMEM259-202ENST00000356663 MT1BP07438 61 aa8.14□□□□□ -1.11
TMEM259-202ENST00000356663 KRTAP9-8Q9BYQ0 159 aa8.13□□□□□ -1.11
TMEM259-202ENST00000356663 KRTAP10-7P60409 375 aaPredicted RBP8.03□□□□□ -1.12
TMEM259-202ENST00000356663 LCE3CQ5T5A8 94 aa7.9□□□□□ -1.14
TMEM259-202ENST00000356663 KRTAP19-5Q3LI72 72 aa7.8□□□□□ -1.16
TMEM259-202ENST00000356663 KRTAP9-3Q9BYQ3 159 aa7.76□□□□□ -1.17
TMEM259-202ENST00000356663 KRTAP9-6A8MVA2 160 aa7.64□□□□□ -1.19
TMEM259-202ENST00000356663 KMT2DO14686 5537 aa7.61□□□□□ -1.19
TMEM259-202ENST00000356663 KRTAP2-3P0C7H8 128 aa7.61□□□□□ -1.19
TMEM259-202ENST00000356663 KRTAP2-4Q9BYR9 128 aa7.61□□□□□ -1.19
TMEM259-202ENST00000356663 KRTAP2-1Q9BYU5 128 aa7.61□□□□□ -1.19
TMEM259-202ENST00000356663 USH2AO75445 5202 aa7.6□□□□□ -1.19
TMEM259-202ENST00000356663 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
TMEM259-202ENST00000356663 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
TMEM259-202ENST00000356663 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
TMEM259-202ENST00000356663 LCE2BO14633 110 aa7.37□□□□□ -1.23
TMEM259-202ENST00000356663 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
TMEM259-202ENST00000356663 KRTAP19-7Q3SYF9 63 aa7.32□□□□□ -1.24
TMEM259-202ENST00000356663 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
TMEM259-202ENST00000356663 FSIP2Q5CZC0 6907 aa7.29□□□□□ -1.24
TMEM259-202ENST00000356663 MT1LQ93083 61 aa7.15□□□□□ -1.26
TMEM259-202ENST00000356663 MT1EP04732 61 aa7.07□□□□□ -1.28
TMEM259-202ENST00000356663 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
TMEM259-202ENST00000356663 KRTAP12-4P60329 112 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms