RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
SIRPA-201ENST00000356025 PKD1P98161 4303 aa6.35□□□□□ -1.39
SIRPA-201ENST00000356025 J3QL48 77 aa6.34□□□□□ -1.39
SIRPA-201ENST00000356025 XP32Q5T750 250 aa6.34□□□□□ -1.39
SIRPA-201ENST00000356025 KRTAP10-4P60372 401 aaPredicted RBP6.34□□□□□ -1.39
SIRPA-201ENST00000356025 FAT3Q8TDW7 4589 aa6.32□□□□□ -1.4
SIRPA-201ENST00000356025 RPL37P61927 97 aaKnown RBP6.31□□□□□ -1.4
SIRPA-201ENST00000356025 KRTAP10-8P60410 259 aa6.31□□□□□ -1.4
SIRPA-201ENST00000356025 KIAA1109Q2LD37 5005 aa6.31□□□□□ -1.4
SIRPA-201ENST00000356025 ROMO1P60602 79 aa6.25□□□□□ -1.41
SIRPA-201ENST00000356025 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
SIRPA-201ENST00000356025 P0C880 135 aa6.24□□□□□ -1.41
SIRPA-201ENST00000356025 RYR1P21817 5038 aa6.23□□□□□ -1.41
SIRPA-201ENST00000356025 RYR3Q15413 4870 aa6.2□□□□□ -1.42
SIRPA-201ENST00000356025 RYR2Q92736 4967 aa6.17□□□□□ -1.42
SIRPA-201ENST00000356025 KRTAP17-1Q9BYP8 105 aa6.14□□□□□ -1.43
SIRPA-201ENST00000356025 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
SIRPA-201ENST00000356025 M0QZ58 72 aa6.12□□□□□ -1.43
SIRPA-201ENST00000356025 KRTAP4-5Q9BYR2 181 aa6.12□□□□□ -1.43
SIRPA-201ENST00000356025 R4GN34 69 aa6.11□□□□□ -1.43
SIRPA-201ENST00000356025 MT1HL1P0DM35 61 aa6.09□□□□□ -1.43
SIRPA-201ENST00000356025 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
SIRPA-201ENST00000356025 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
SIRPA-201ENST00000356025 LRP2P98164 4655 aa6.06□□□□□ -1.44
SIRPA-201ENST00000356025 HSPG2P98160 4391 aa6.06□□□□□ -1.44
SIRPA-201ENST00000356025 NDUFAF8A1L188 74 aa6.05□□□□□ -1.44
SIRPA-201ENST00000356025 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
SIRPA-201ENST00000356025 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
SIRPA-201ENST00000356025 KRTAP12-2P59991 146 aa5.99□□□□□ -1.45
SIRPA-201ENST00000356025 PKHD1L1Q86WI1 4243 aa5.99□□□□□ -1.45
SIRPA-201ENST00000356025 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
SIRPA-201ENST00000356025 LPAP08519 4548 aa5.96□□□□□ -1.45
SIRPA-201ENST00000356025 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
SIRPA-201ENST00000356025 EPPK1P58107 5090 aaKnown RBP5.93□□□□□ -1.46
SIRPA-201ENST00000356025 M0R2T5 61 aa5.87□□□□□ -1.47
SIRPA-201ENST00000356025 KRTAP12-1P59990 96 aa5.86□□□□□ -1.47
SIRPA-201ENST00000356025 TNXBP22105 4242 aa5.86□□□□□ -1.47
SIRPA-201ENST00000356025 ABCA13Q86UQ4 5058 aa5.83□□□□□ -1.48
SIRPA-201ENST00000356025 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
SIRPA-201ENST00000356025 HERC2O95714 4834 aa5.76□□□□□ -1.49
SIRPA-201ENST00000356025 MUC2Q02817 5179 aa5.75□□□□□ -1.49
SIRPA-201ENST00000356025 KRTAP4-1Q9BYQ7 146 aa5.74□□□□□ -1.49
SIRPA-201ENST00000356025 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
SIRPA-201ENST00000356025 LUZP6Q538Z0 58 aa5.62□□□□□ -1.51
SIRPA-201ENST00000356025 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
SIRPA-201ENST00000356025 HERC1Q15751 4861 aa5.53□□□□□ -1.52
SIRPA-201ENST00000356025 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
SIRPA-201ENST00000356025 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
SIRPA-201ENST00000356025 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
SIRPA-201ENST00000356025 TNP1P09430 55 aa5.46□□□□□ -1.54
SIRPA-201ENST00000356025 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
SIRPA-201ENST00000356025 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
SIRPA-201ENST00000356025 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
SIRPA-201ENST00000356025 UBR4Q5T4S7 5183 aa5.31□□□□□ -1.56
SIRPA-201ENST00000356025 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
SIRPA-201ENST00000356025 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
SIRPA-201ENST00000356025 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
SIRPA-201ENST00000356025 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
SIRPA-201ENST00000356025 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
SIRPA-201ENST00000356025 MT1HP80294 61 aa5.14□□□□□ -1.59
SIRPA-201ENST00000356025 MT1FP04733 61 aa5.1□□□□□ -1.59
SIRPA-201ENST00000356025 LCE2CQ5TA81 110 aa5.1□□□□□ -1.59
SIRPA-201ENST00000356025 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
SIRPA-201ENST00000356025 MT2AP02795 61 aa5.07□□□□□ -1.6
SIRPA-201ENST00000356025 KRTAP19-1Q8IUB9 90 aa5.06□□□□□ -1.6
SIRPA-201ENST00000356025 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
SIRPA-201ENST00000356025 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
SIRPA-201ENST00000356025 USH2AO75445 5202 aa4.92□□□□□ -1.62
SIRPA-201ENST00000356025 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
SIRPA-201ENST00000356025 KRTAP10-12P60413 245 aa4.9□□□□□ -1.63
SIRPA-201ENST00000356025 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
SIRPA-201ENST00000356025 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
SIRPA-201ENST00000356025 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
SIRPA-201ENST00000356025 MT1BP07438 61 aa4.8□□□□□ -1.64
SIRPA-201ENST00000356025 KMT2DO14686 5537 aa4.78□□□□□ -1.64
SIRPA-201ENST00000356025 MT1XP80297 61 aa4.77□□□□□ -1.65
SIRPA-201ENST00000356025 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
SIRPA-201ENST00000356025 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
SIRPA-201ENST00000356025 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
SIRPA-201ENST00000356025 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
SIRPA-201ENST00000356025 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
SIRPA-201ENST00000356025 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
SIRPA-201ENST00000356025 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
SIRPA-201ENST00000356025 KRTAP4-8Q9BYQ9 185 aa4.66□□□□□ -1.66
SIRPA-201ENST00000356025 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
SIRPA-201ENST00000356025 LCE2BO14633 110 aa4.62□□□□□ -1.67
SIRPA-201ENST00000356025 CRCT1Q9UGL9 99 aa4.53□□□□□ -1.68
SIRPA-201ENST00000356025 INE1O15225 51 aa4.5□□□□□ -1.69
SIRPA-201ENST00000356025 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
SIRPA-201ENST00000356025 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
SIRPA-201ENST00000356025 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
SIRPA-201ENST00000356025 LCE2AQ5TA79 106 aaPredicted RBP4.34□□□□□ -1.71
SIRPA-201ENST00000356025 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
SIRPA-201ENST00000356025 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
SIRPA-201ENST00000356025 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
SIRPA-201ENST00000356025 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
SIRPA-201ENST00000356025 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
SIRPA-201ENST00000356025 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.73
SIRPA-201ENST00000356025 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SIRPA-201ENST00000356025 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms