RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 KMT2AQ03164 3969 aa3.88□□□□□ -1.79
CCR9-201ENST00000355983 DNAH5Q8TE73 4624 aa3.86□□□□□ -1.79
CCR9-201ENST00000355983 M0QZ58 72 aa3.86□□□□□ -1.79
CCR9-201ENST00000355983 PLAC4Q8WY50 150 aa3.86□□□□□ -1.79
CCR9-201ENST00000355983 C9orf92A6NGG3 77 aa3.86□□□□□ -1.79
CCR9-201ENST00000355983 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
CCR9-201ENST00000355983 PCLOQ9Y6V0 5065 aa3.85□□□□□ -1.79
CCR9-201ENST00000355983 KRTAP10-2P60368 255 aa3.84□□□□□ -1.79
CCR9-201ENST00000355983 MGAM2Q2M2H8 2515 aa3.84□□□□□ -1.79
CCR9-201ENST00000355983 LRP1BQ9NZR2 4599 aa3.83□□□□□ -1.8
CCR9-201ENST00000355983 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
CCR9-201ENST00000355983 PKHD1L1Q86WI1 4243 aa3.82□□□□□ -1.8
CCR9-201ENST00000355983 STARD9Q9P2P6 4700 aa3.81□□□□□ -1.8
CCR9-201ENST00000355983 VPS13BQ7Z7G8 4022 aa3.78□□□□□ -1.8
CCR9-201ENST00000355983 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
CCR9-201ENST00000355983 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
CCR9-201ENST00000355983 CAMK2N1Q7Z7J9 78 aa3.76□□□□□ -1.81
CCR9-201ENST00000355983 PKD1P98161 4303 aa3.75□□□□□ -1.81
CCR9-201ENST00000355983 RYR3Q15413 4870 aa3.73□□□□□ -1.81
CCR9-201ENST00000355983 PKHD1P08F94 4074 aa3.72□□□□□ -1.81
CCR9-201ENST00000355983 DMBT1Q9UGM3 2413 aaPredicted RBP3.71□□□□□ -1.81
CCR9-201ENST00000355983 KRTAP10-8P60410 259 aa3.68□□□□□ -1.82
CCR9-201ENST00000355983 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
CCR9-201ENST00000355983 APOBP04114 4563 aaKnown RBP3.66□□□□□ -1.82
CCR9-201ENST00000355983 KIAA1109Q2LD37 5005 aa3.66□□□□□ -1.82
CCR9-201ENST00000355983 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
CCR9-201ENST00000355983 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
CCR9-201ENST00000355983 TNXBP22105 4242 aa3.65□□□□□ -1.83
CCR9-201ENST00000355983 MYCBP2O75592 4640 aa3.65□□□□□ -1.83
CCR9-201ENST00000355983 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
CCR9-201ENST00000355983 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
CCR9-201ENST00000355983 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
CCR9-201ENST00000355983 HSPG2P98160 4391 aa3.6□□□□□ -1.83
CCR9-201ENST00000355983 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
CCR9-201ENST00000355983 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
CCR9-201ENST00000355983 R4GN34 69 aa3.57□□□□□ -1.84
CCR9-201ENST00000355983 FAT1Q14517 4588 aa3.54□□□□□ -1.84
CCR9-201ENST00000355983 INE1O15225 51 aa3.54□□□□□ -1.84
CCR9-201ENST00000355983 LCE2AQ5TA79 106 aaPredicted RBP3.52□□□□□ -1.85
CCR9-201ENST00000355983 LCE2CQ5TA81 110 aa3.52□□□□□ -1.85
CCR9-201ENST00000355983 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
CCR9-201ENST00000355983 RYR2Q92736 4967 aa3.5□□□□□ -1.85
CCR9-201ENST00000355983 SMR3BP02814 79 aaPredicted RBP3.49□□□□□ -1.85
CCR9-201ENST00000355983 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
CCR9-201ENST00000355983 A0A1B0GVY2 172 aa3.47□□□□□ -1.85
CCR9-201ENST00000355983 KMT2CQ8NEZ4 4911 aaKnown RBP3.46□□□□□ -1.86
CCR9-201ENST00000355983 HERC2O95714 4834 aa3.41□□□□□ -1.86
CCR9-201ENST00000355983 TNP1P09430 55 aa3.41□□□□□ -1.86
CCR9-201ENST00000355983 Q5VSD8 79 aa3.4□□□□□ -1.86
CCR9-201ENST00000355983 UBR4Q5T4S7 5183 aa3.4□□□□□ -1.87
CCR9-201ENST00000355983 LCE2BO14633 110 aa3.39□□□□□ -1.87
CCR9-201ENST00000355983 LORP23490 312 aaPredicted RBP3.39□□□□□ -1.87
CCR9-201ENST00000355983 EPPK1P58107 5090 aaKnown RBP3.37□□□□□ -1.87
CCR9-201ENST00000355983 RYR1P21817 5038 aa3.36□□□□□ -1.87
CCR9-201ENST00000355983 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
CCR9-201ENST00000355983 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
CCR9-201ENST00000355983 MT1HL1P0DM35 61 aa3.26□□□□□ -1.89
CCR9-201ENST00000355983 HERC1Q15751 4861 aa3.26□□□□□ -1.89
CCR9-201ENST00000355983 LPAP08519 4548 aa3.23□□□□□ -1.89
CCR9-201ENST00000355983 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
CCR9-201ENST00000355983 MUC17Q685J3 4493 aa3.21□□□□□ -1.9
CCR9-201ENST00000355983 LRP2P98164 4655 aa3.2□□□□□ -1.9
CCR9-201ENST00000355983 KRTAP19-2Q3LHN2 52 aa3.19□□□□□ -1.9
CCR9-201ENST00000355983 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
CCR9-201ENST00000355983 MUC2Q02817 5179 aa3.14□□□□□ -1.91
CCR9-201ENST00000355983 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
CCR9-201ENST00000355983 KRTAP4-5Q9BYR2 181 aa3.13□□□□□ -1.91
CCR9-201ENST00000355983 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
CCR9-201ENST00000355983 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
CCR9-201ENST00000355983 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
CCR9-201ENST00000355983 SPRR2GQ9BYE4 73 aa3.08□□□□□ -1.92
CCR9-201ENST00000355983 ABCA13Q86UQ4 5058 aa3.07□□□□□ -1.92
CCR9-201ENST00000355983 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
CCR9-201ENST00000355983 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
CCR9-201ENST00000355983 KRTAP10-10P60014 251 aa3.04□□□□□ -1.92
CCR9-201ENST00000355983 FAT4Q6V0I7 4981 aa3□□□□□ -1.93
CCR9-201ENST00000355983 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
CCR9-201ENST00000355983 KRTAP19-1Q8IUB9 90 aa2.98□□□□□ -1.93
CCR9-201ENST00000355983 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
CCR9-201ENST00000355983 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
CCR9-201ENST00000355983 HMCN2Q8NDA2 5059 aa2.91□□□□□ -1.94
CCR9-201ENST00000355983 KRTAP19-8Q3LI54 63 aa2.9□□□□□ -1.95
CCR9-201ENST00000355983 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
CCR9-201ENST00000355983 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
CCR9-201ENST00000355983 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
CCR9-201ENST00000355983 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
CCR9-201ENST00000355983 NEBP20929 6669 aa2.85□□□□□ -1.95
CCR9-201ENST00000355983 MT1XP80297 61 aa2.84□□□□□ -1.95
CCR9-201ENST00000355983 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
CCR9-201ENST00000355983 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
CCR9-201ENST00000355983 MT1BP07438 61 aa2.77□□□□□ -1.97
CCR9-201ENST00000355983 KRTAP10-7P60409 375 aaPredicted RBP2.76□□□□□ -1.97
CCR9-201ENST00000355983 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
CCR9-201ENST00000355983 MT2AP02795 61 aa2.75□□□□□ -1.97
CCR9-201ENST00000355983 MT1FP04733 61 aa2.74□□□□□ -1.97
CCR9-201ENST00000355983 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
CCR9-201ENST00000355983 RNF213Q63HN8 5207 aa2.74□□□□□ -1.97
CCR9-201ENST00000355983 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
CCR9-201ENST00000355983 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
CCR9-201ENST00000355983 LOC100996750A0A140TA64 210 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms