RNA–Protein interactions for RNA: ENST00000355540.7

TRRAP-201, Transcript of transformation/transcription domain associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRRAP, Length 12,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAP-201ENST00000355540 PRKDCP78527 4128 aaKnown RBP3.47□□□□□ -1.85
TRRAP-201ENST00000355540 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
TRRAP-201ENST00000355540 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
TRRAP-201ENST00000355540 DNAH2Q9P225 4427 aa3.42□□□□□ -1.86
TRRAP-201ENST00000355540 KMT2AQ03164 3969 aa3.4□□□□□ -1.86
TRRAP-201ENST00000355540 VPS13DQ5THJ4 4388 aa3.39□□□□□ -1.87
TRRAP-201ENST00000355540 DNAH9Q9NYC9 4486 aa3.37□□□□□ -1.87
TRRAP-201ENST00000355540 VPS13BQ7Z7G8 4022 aa3.36□□□□□ -1.87
TRRAP-201ENST00000355540 DYNC2H1Q8NCM8 4307 aaKnown RBP3.34□□□□□ -1.87
TRRAP-201ENST00000355540 DNAH10Q8IVF4 4471 aa3.34□□□□□ -1.88
TRRAP-201ENST00000355540 MT3P25713 68 aa3.32□□□□□ -1.88
TRRAP-201ENST00000355540 CSMD3Q7Z407 3707 aa3.31□□□□□ -1.88
TRRAP-201ENST00000355540 DNAH17Q9UFH2 4485 aa3.27□□□□□ -1.89
TRRAP-201ENST00000355540 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
TRRAP-201ENST00000355540 DNAH11Q96DT5 4516 aa3.27□□□□□ -1.89
TRRAP-201ENST00000355540 FAT2Q9NYQ8 4349 aa3.26□□□□□ -1.89
TRRAP-201ENST00000355540 PKHD1L1Q86WI1 4243 aa3.25□□□□□ -1.89
TRRAP-201ENST00000355540 PKHD1P08F94 4074 aa3.25□□□□□ -1.89
TRRAP-201ENST00000355540 DYNC1H1Q14204 4646 aaKnown RBP3.24□□□□□ -1.89
TRRAP-201ENST00000355540 MT1HL1P0DM35 61 aa3.23□□□□□ -1.89
TRRAP-201ENST00000355540 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
TRRAP-201ENST00000355540 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.9
TRRAP-201ENST00000355540 LORP23490 312 aaPredicted RBP3.18□□□□□ -1.9
TRRAP-201ENST00000355540 KRTAP4-5Q9BYR2 181 aa3.17□□□□□ -1.9
TRRAP-201ENST00000355540 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
TRRAP-201ENST00000355540 PLECQ15149 4684 aaKnown RBP3.15□□□□□ -1.91
TRRAP-201ENST00000355540 KRTAP3-1Q9BYR8 98 aa3.13□□□□□ -1.91
TRRAP-201ENST00000355540 DNAH8Q96JB1 4490 aa3.12□□□□□ -1.91
TRRAP-201ENST00000355540 STARD9Q9P2P6 4700 aa3.09□□□□□ -1.91
TRRAP-201ENST00000355540 KRTAP8-1Q8IUC2 63 aa3.09□□□□□ -1.92
TRRAP-201ENST00000355540 KRTAP10-7P60409 375 aaPredicted RBP3.05□□□□□ -1.92
TRRAP-201ENST00000355540 DNAH5Q8TE73 4624 aa3.05□□□□□ -1.92
TRRAP-201ENST00000355540 KRTAP3-2Q9BYR7 98 aa2.98□□□□□ -1.93
TRRAP-201ENST00000355540 KRTAP3-3Q9BYR6 98 aa2.97□□□□□ -1.93
TRRAP-201ENST00000355540 SPRR2GQ9BYE4 73 aa2.96□□□□□ -1.94
TRRAP-201ENST00000355540 APOBP04114 4563 aaKnown RBP2.95□□□□□ -1.94
TRRAP-201ENST00000355540 LRP1BQ9NZR2 4599 aa2.94□□□□□ -1.94
TRRAP-201ENST00000355540 DNHD1Q96M86 4753 aa2.93□□□□□ -1.94
TRRAP-201ENST00000355540 SACSQ9NZJ4 4579 aa2.93□□□□□ -1.94
TRRAP-201ENST00000355540 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
TRRAP-201ENST00000355540 RYR3Q15413 4870 aa2.9□□□□□ -1.94
TRRAP-201ENST00000355540 FAT1Q14517 4588 aa2.9□□□□□ -1.94
TRRAP-201ENST00000355540 LCE3AQ5TA76 89 aa2.9□□□□□ -1.94
TRRAP-201ENST00000355540 PKD1P98161 4303 aa2.89□□□□□ -1.95
TRRAP-201ENST00000355540 TNXBP22105 4242 aa2.89□□□□□ -1.95
TRRAP-201ENST00000355540 CRCT1Q9UGL9 99 aa2.88□□□□□ -1.95
TRRAP-201ENST00000355540 LRP1Q07954 4544 aaKnown RBP2.86□□□□□ -1.95
TRRAP-201ENST00000355540 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
TRRAP-201ENST00000355540 MT1HP80294 61 aa2.84□□□□□ -1.95
TRRAP-201ENST00000355540 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
TRRAP-201ENST00000355540 RYR1P21817 5038 aa2.83□□□□□ -1.96
TRRAP-201ENST00000355540 MYCBP2O75592 4640 aa2.82□□□□□ -1.96
TRRAP-201ENST00000355540 RYR2Q92736 4967 aa2.81□□□□□ -1.96
TRRAP-201ENST00000355540 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
TRRAP-201ENST00000355540 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
TRRAP-201ENST00000355540 HSPG2P98160 4391 aa2.8□□□□□ -1.96
TRRAP-201ENST00000355540 MT2AP02795 61 aa2.75□□□□□ -1.97
TRRAP-201ENST00000355540 PCLOQ9Y6V0 5065 aa2.72□□□□□ -1.97
TRRAP-201ENST00000355540 MT1FP04733 61 aa2.7□□□□□ -1.98
TRRAP-201ENST00000355540 SPRR2FQ96RM1 72 aa2.7□□□□□ -1.98
TRRAP-201ENST00000355540 MT1GP13640 62 aa2.67□□□□□ -1.98
TRRAP-201ENST00000355540 LPAP08519 4548 aa2.64□□□□□ -1.99
TRRAP-201ENST00000355540 LCE2BO14633 110 aa2.63□□□□□ -1.99
TRRAP-201ENST00000355540 KRTAP19-8Q3LI54 63 aa2.63□□□□□ -1.99
TRRAP-201ENST00000355540 KRTAP17-1Q9BYP8 105 aa2.63□□□□□ -1.99
TRRAP-201ENST00000355540 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
TRRAP-201ENST00000355540 HYDINQ4G0P3 5121 aa2.6□□□□□ -1.99
TRRAP-201ENST00000355540 MUC17Q685J3 4493 aa2.6□□□□□ -1.99
TRRAP-201ENST00000355540 BIRC6Q9NR09 4857 aa2.59□□□□□ -2
TRRAP-201ENST00000355540 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
TRRAP-201ENST00000355540 SPRR2EP22531 72 aa2.58□□□□□ -2
TRRAP-201ENST00000355540 SPRR2BP35325 72 aa2.58□□□□□ -2
TRRAP-201ENST00000355540 SPRR2AP35326 72 aa2.58□□□□□ -2
TRRAP-201ENST00000355540 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
TRRAP-201ENST00000355540 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
TRRAP-201ENST00000355540 HERC2O95714 4834 aa2.55□□□□□ -2
TRRAP-201ENST00000355540 SPRR2DP22532 72 aa2.54□□□□□ -2
TRRAP-201ENST00000355540 MT1LQ93083 61 aa2.54□□□□□ -2
TRRAP-201ENST00000355540 HERC1Q15751 4861 aa2.52□□□□□ -2.01
TRRAP-201ENST00000355540 LCE2CQ5TA81 110 aa2.5□□□□□ -2.01
TRRAP-201ENST00000355540 KRTAP19-1Q8IUB9 90 aa2.47□□□□□ -2.01
TRRAP-201ENST00000355540 MT1XP80297 61 aa2.47□□□□□ -2.01
TRRAP-201ENST00000355540 KMT2CQ8NEZ4 4911 aaKnown RBP2.47□□□□□ -2.01
TRRAP-201ENST00000355540 KRTAP9-8Q9BYQ0 159 aa2.45□□□□□ -2.02
TRRAP-201ENST00000355540 KIAA1109Q2LD37 5005 aa2.44□□□□□ -2.02
TRRAP-201ENST00000355540 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
TRRAP-201ENST00000355540 MT1EP04732 61 aa2.43□□□□□ -2.02
TRRAP-201ENST00000355540 KRTAP9-3Q9BYQ3 159 aa2.43□□□□□ -2.02
TRRAP-201ENST00000355540 LRP2P98164 4655 aa2.41□□□□□ -2.02
TRRAP-201ENST00000355540 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
TRRAP-201ENST00000355540 MT1BP07438 61 aa2.41□□□□□ -2.02
TRRAP-201ENST00000355540 EPPK1P58107 5090 aaKnown RBP2.39□□□□□ -2.03
TRRAP-201ENST00000355540 LCE3BQ5TA77 95 aa2.38□□□□□ -2.03
TRRAP-201ENST00000355540 KRTAP9-2Q9BYQ4 174 aa2.37□□□□□ -2.03
TRRAP-201ENST00000355540 MT1MQ8N339 61 aa2.35□□□□□ -2.03
TRRAP-201ENST00000355540 ABCA13Q86UQ4 5058 aa2.35□□□□□ -2.03
TRRAP-201ENST00000355540 MT1AP04731 61 aa2.31□□□□□ -2.04
TRRAP-201ENST00000355540 LCE1AQ5T7P2 110 aa2.31□□□□□ -2.04
TRRAP-201ENST00000355540 LCE2DQ5TA82 110 aaPredicted RBP2.31□□□□□ -2.04
TRRAP-201ENST00000355540 KRTAP19-2Q3LHN2 52 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms