RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 SACSQ9NZJ4 4579 aa8.55□□□□□ -1.04
C2CD4A-201ENST00000355522 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
C2CD4A-201ENST00000355522 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.05
C2CD4A-201ENST00000355522 APOBP04114 4563 aaKnown RBP8.51□□□□□ -1.05
C2CD4A-201ENST00000355522 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
C2CD4A-201ENST00000355522 S4R3F8 94 aa8.42□□□□□ -1.06
C2CD4A-201ENST00000355522 HSPG2P98160 4391 aa8.37□□□□□ -1.07
C2CD4A-201ENST00000355522 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
C2CD4A-201ENST00000355522 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
C2CD4A-201ENST00000355522 KIAA1109Q2LD37 5005 aa8.34□□□□□ -1.07
C2CD4A-201ENST00000355522 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
C2CD4A-201ENST00000355522 LPAP08519 4548 aa8.28□□□□□ -1.08
C2CD4A-201ENST00000355522 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
C2CD4A-201ENST00000355522 Q5VSD8 79 aa8.25□□□□□ -1.09
C2CD4A-201ENST00000355522 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
C2CD4A-201ENST00000355522 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
C2CD4A-201ENST00000355522 LRP2P98164 4655 aa8.21□□□□□ -1.1
C2CD4A-201ENST00000355522 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.1
C2CD4A-201ENST00000355522 KRTAP15-1Q3LI76 137 aa8.2□□□□□ -1.1
C2CD4A-201ENST00000355522 KRTAP10-4P60372 401 aaPredicted RBP8.2□□□□□ -1.1
C2CD4A-201ENST00000355522 RYR2Q92736 4967 aa8.19□□□□□ -1.1
C2CD4A-201ENST00000355522 RYR1P21817 5038 aa8.18□□□□□ -1.1
C2CD4A-201ENST00000355522 RYR3Q15413 4870 aa8.18□□□□□ -1.1
C2CD4A-201ENST00000355522 A0A1B0GVY2 172 aa8.17□□□□□ -1.1
C2CD4A-201ENST00000355522 KRTAP17-1Q9BYP8 105 aa8.13□□□□□ -1.11
C2CD4A-201ENST00000355522 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
C2CD4A-201ENST00000355522 M0QZ58 72 aa8.08□□□□□ -1.12
C2CD4A-201ENST00000355522 XP32Q5T750 250 aa8.08□□□□□ -1.12
C2CD4A-201ENST00000355522 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
C2CD4A-201ENST00000355522 R4GN34 69 aa8.02□□□□□ -1.13
C2CD4A-201ENST00000355522 EPPK1P58107 5090 aaKnown RBP8□□□□□ -1.13
C2CD4A-201ENST00000355522 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
C2CD4A-201ENST00000355522 LUZP6Q538Z0 58 aa7.98□□□□□ -1.13
C2CD4A-201ENST00000355522 TNXBP22105 4242 aa7.96□□□□□ -1.13
C2CD4A-201ENST00000355522 MUC2Q02817 5179 aa7.96□□□□□ -1.13
C2CD4A-201ENST00000355522 PLAC4Q8WY50 150 aa7.93□□□□□ -1.14
C2CD4A-201ENST00000355522 KRTAP4-5Q9BYR2 181 aa7.85□□□□□ -1.15
C2CD4A-201ENST00000355522 CAMK2N1Q7Z7J9 78 aa7.82□□□□□ -1.16
C2CD4A-201ENST00000355522 J3QL48 77 aa7.78□□□□□ -1.16
C2CD4A-201ENST00000355522 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
C2CD4A-201ENST00000355522 KRTAP21-3Q3LHN1 58 aa7.78□□□□□ -1.16
C2CD4A-201ENST00000355522 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
C2CD4A-201ENST00000355522 HERC2O95714 4834 aa7.53□□□□□ -1.2
C2CD4A-201ENST00000355522 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.21
C2CD4A-201ENST00000355522 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
C2CD4A-201ENST00000355522 RNF213Q63HN8 5207 aa7.47□□□□□ -1.21
C2CD4A-201ENST00000355522 HERC1Q15751 4861 aa7.46□□□□□ -1.22
C2CD4A-201ENST00000355522 PP632Q6XCG6 107 aa7.42□□□□□ -1.22
C2CD4A-201ENST00000355522 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
C2CD4A-201ENST00000355522 TNP1P09430 55 aa7.33□□□□□ -1.24
C2CD4A-201ENST00000355522 PCLOQ9Y6V0 5065 aa7.25□□□□□ -1.25
C2CD4A-201ENST00000355522 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
C2CD4A-201ENST00000355522 M0R2T5 61 aa7.23□□□□□ -1.25
C2CD4A-201ENST00000355522 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
C2CD4A-201ENST00000355522 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.27
C2CD4A-201ENST00000355522 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
C2CD4A-201ENST00000355522 FLGP20930 4061 aaPredicted RBP6.9□□□□□ -1.3
C2CD4A-201ENST00000355522 BIRC6Q9NR09 4857 aa6.84□□□□□ -1.31
C2CD4A-201ENST00000355522 KRTAP10-10P60014 251 aa6.8□□□□□ -1.32
C2CD4A-201ENST00000355522 LCE3AQ5TA76 89 aa6.8□□□□□ -1.32
C2CD4A-201ENST00000355522 USH2AO75445 5202 aa6.77□□□□□ -1.33
C2CD4A-201ENST00000355522 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
C2CD4A-201ENST00000355522 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
C2CD4A-201ENST00000355522 FSIP2Q5CZC0 6907 aa6.74□□□□□ -1.33
C2CD4A-201ENST00000355522 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
C2CD4A-201ENST00000355522 KMT2DO14686 5537 aa6.65□□□□□ -1.34
C2CD4A-201ENST00000355522 LCE2CQ5TA81 110 aa6.62□□□□□ -1.35
C2CD4A-201ENST00000355522 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.36
C2CD4A-201ENST00000355522 MT1FP04733 61 aa6.57□□□□□ -1.36
C2CD4A-201ENST00000355522 INE1O15225 51 aa6.56□□□□□ -1.36
C2CD4A-201ENST00000355522 MT1HP80294 61 aa6.54□□□□□ -1.36
C2CD4A-201ENST00000355522 MT2AP02795 61 aa6.48□□□□□ -1.37
C2CD4A-201ENST00000355522 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
C2CD4A-201ENST00000355522 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
C2CD4A-201ENST00000355522 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
C2CD4A-201ENST00000355522 KRTAP8-1Q8IUC2 63 aa6.34□□□□□ -1.39
C2CD4A-201ENST00000355522 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
C2CD4A-201ENST00000355522 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
C2CD4A-201ENST00000355522 MT1BP07438 61 aa6.22□□□□□ -1.41
C2CD4A-201ENST00000355522 KRTAP10-5P60370 271 aa6.21□□□□□ -1.41
C2CD4A-201ENST00000355522 MT1XP80297 61 aa6.21□□□□□ -1.41
C2CD4A-201ENST00000355522 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
C2CD4A-201ENST00000355522 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
C2CD4A-201ENST00000355522 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
C2CD4A-201ENST00000355522 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
C2CD4A-201ENST00000355522 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
C2CD4A-201ENST00000355522 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
C2CD4A-201ENST00000355522 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
C2CD4A-201ENST00000355522 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
C2CD4A-201ENST00000355522 LCE2BO14633 110 aa5.96□□□□□ -1.45
C2CD4A-201ENST00000355522 OBSCNQ5VST9 7968 aa5.96□□□□□ -1.46
C2CD4A-201ENST00000355522 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
C2CD4A-201ENST00000355522 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
C2CD4A-201ENST00000355522 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
C2CD4A-201ENST00000355522 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
C2CD4A-201ENST00000355522 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
C2CD4A-201ENST00000355522 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
C2CD4A-201ENST00000355522 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
C2CD4A-201ENST00000355522 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
C2CD4A-201ENST00000355522 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms