RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
NUDCD3-202ENST00000355451 LYSTQ99698 3801 aa4.94□□□□□ -1.62
NUDCD3-202ENST00000355451 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
NUDCD3-202ENST00000355451 CMYA5Q8N3K9 4069 aa4.89□□□□□ -1.63
NUDCD3-202ENST00000355451 ANK2Q01484 3957 aa4.87□□□□□ -1.63
NUDCD3-202ENST00000355451 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
NUDCD3-202ENST00000355451 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
NUDCD3-202ENST00000355451 MT1HL1P0DM35 61 aa4.73□□□□□ -1.65
NUDCD3-202ENST00000355451 DNAH10Q8IVF4 4471 aa4.73□□□□□ -1.65
NUDCD3-202ENST00000355451 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
NUDCD3-202ENST00000355451 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.65
NUDCD3-202ENST00000355451 DNAH2Q9P225 4427 aa4.68□□□□□ -1.66
NUDCD3-202ENST00000355451 DNAH7Q8WXX0 4024 aa4.68□□□□□ -1.66
NUDCD3-202ENST00000355451 DNAH3Q8TD57 4116 aa4.66□□□□□ -1.66
NUDCD3-202ENST00000355451 SPRR2EP22531 72 aa4.62□□□□□ -1.67
NUDCD3-202ENST00000355451 SPRR2BP35325 72 aa4.62□□□□□ -1.67
NUDCD3-202ENST00000355451 SPRR2AP35326 72 aa4.62□□□□□ -1.67
NUDCD3-202ENST00000355451 DNAH1Q9P2D7 4330 aa4.61□□□□□ -1.67
NUDCD3-202ENST00000355451 KRTAP3-3Q9BYR6 98 aa4.6□□□□□ -1.67
NUDCD3-202ENST00000355451 KRTAP3-2Q9BYR7 98 aa4.59□□□□□ -1.67
NUDCD3-202ENST00000355451 DNAH9Q9NYC9 4486 aa4.57□□□□□ -1.68
NUDCD3-202ENST00000355451 KRTAP10-4P60372 401 aaPredicted RBP4.56□□□□□ -1.68
NUDCD3-202ENST00000355451 PRKDCP78527 4128 aaKnown RBP4.55□□□□□ -1.68
NUDCD3-202ENST00000355451 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
NUDCD3-202ENST00000355451 HECTD4Q9Y4D8 3996 aa4.52□□□□□ -1.69
NUDCD3-202ENST00000355451 DNAH6Q9C0G6 4158 aa4.52□□□□□ -1.69
NUDCD3-202ENST00000355451 SPRR2DP22532 72 aa4.48□□□□□ -1.69
NUDCD3-202ENST00000355451 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
NUDCD3-202ENST00000355451 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
NUDCD3-202ENST00000355451 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
NUDCD3-202ENST00000355451 LCE2BO14633 110 aa4.4□□□□□ -1.71
NUDCD3-202ENST00000355451 MT1HP80294 61 aa4.37□□□□□ -1.71
NUDCD3-202ENST00000355451 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
NUDCD3-202ENST00000355451 FAT2Q9NYQ8 4349 aa4.36□□□□□ -1.71
NUDCD3-202ENST00000355451 DNAH11Q96DT5 4516 aa4.34□□□□□ -1.71
NUDCD3-202ENST00000355451 STARD9Q9P2P6 4700 aa4.32□□□□□ -1.72
NUDCD3-202ENST00000355451 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
NUDCD3-202ENST00000355451 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
NUDCD3-202ENST00000355451 DNAH8Q96JB1 4490 aa4.29□□□□□ -1.72
NUDCD3-202ENST00000355451 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
NUDCD3-202ENST00000355451 PKHD1P08F94 4074 aa4.25□□□□□ -1.73
NUDCD3-202ENST00000355451 LCE2CQ5TA81 110 aa4.24□□□□□ -1.73
NUDCD3-202ENST00000355451 DNAH17Q9UFH2 4485 aa4.23□□□□□ -1.73
NUDCD3-202ENST00000355451 MT2AP02795 61 aa4.22□□□□□ -1.73
NUDCD3-202ENST00000355451 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.74
NUDCD3-202ENST00000355451 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
NUDCD3-202ENST00000355451 LCE2DQ5TA82 110 aaPredicted RBP4.16□□□□□ -1.74
NUDCD3-202ENST00000355451 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
NUDCD3-202ENST00000355451 MT1GP13640 62 aa4.13□□□□□ -1.75
NUDCD3-202ENST00000355451 KRTAP4-1Q9BYQ7 146 aa4.12□□□□□ -1.75
NUDCD3-202ENST00000355451 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
NUDCD3-202ENST00000355451 FAT3Q8TDW7 4589 aa4.1□□□□□ -1.75
NUDCD3-202ENST00000355451 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
NUDCD3-202ENST00000355451 MT1FP04733 61 aa4.1□□□□□ -1.75
NUDCD3-202ENST00000355451 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
NUDCD3-202ENST00000355451 DNAH5Q8TE73 4624 aa4.06□□□□□ -1.76
NUDCD3-202ENST00000355451 MT4P47944 62 aa4.04□□□□□ -1.76
NUDCD3-202ENST00000355451 FAT1Q14517 4588 aa4.03□□□□□ -1.76
NUDCD3-202ENST00000355451 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
NUDCD3-202ENST00000355451 LPAP08519 4548 aa3.97□□□□□ -1.77
NUDCD3-202ENST00000355451 PKD1P98161 4303 aa3.96□□□□□ -1.78
NUDCD3-202ENST00000355451 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
NUDCD3-202ENST00000355451 APOBP04114 4563 aaKnown RBP3.95□□□□□ -1.78
NUDCD3-202ENST00000355451 LRP1Q07954 4544 aaKnown RBP3.95□□□□□ -1.78
NUDCD3-202ENST00000355451 PKHD1L1Q86WI1 4243 aa3.94□□□□□ -1.78
NUDCD3-202ENST00000355451 MYCBP2O75592 4640 aa3.93□□□□□ -1.78
NUDCD3-202ENST00000355451 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
NUDCD3-202ENST00000355451 HSPG2P98160 4391 aa3.85□□□□□ -1.79
NUDCD3-202ENST00000355451 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
NUDCD3-202ENST00000355451 DYNC1H1Q14204 4646 aaKnown RBP3.84□□□□□ -1.79
NUDCD3-202ENST00000355451 TNXBP22105 4242 aa3.83□□□□□ -1.8
NUDCD3-202ENST00000355451 SACSQ9NZJ4 4579 aa3.83□□□□□ -1.8
NUDCD3-202ENST00000355451 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
NUDCD3-202ENST00000355451 MT3P25713 68 aa3.73□□□□□ -1.81
NUDCD3-202ENST00000355451 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
NUDCD3-202ENST00000355451 KRTAP17-1Q9BYP8 105 aa3.72□□□□□ -1.81
NUDCD3-202ENST00000355451 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
NUDCD3-202ENST00000355451 DNHD1Q96M86 4753 aa3.72□□□□□ -1.81
NUDCD3-202ENST00000355451 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
NUDCD3-202ENST00000355451 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
NUDCD3-202ENST00000355451 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
NUDCD3-202ENST00000355451 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
NUDCD3-202ENST00000355451 PRM1P04553 51 aa3.68□□□□□ -1.82
NUDCD3-202ENST00000355451 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
NUDCD3-202ENST00000355451 MT1XP80297 61 aa3.68□□□□□ -1.82
NUDCD3-202ENST00000355451 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
NUDCD3-202ENST00000355451 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
NUDCD3-202ENST00000355451 LRP2P98164 4655 aa3.62□□□□□ -1.83
NUDCD3-202ENST00000355451 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
NUDCD3-202ENST00000355451 MT1LQ93083 61 aa3.56□□□□□ -1.84
NUDCD3-202ENST00000355451 RYR1P21817 5038 aa3.52□□□□□ -1.85
NUDCD3-202ENST00000355451 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
NUDCD3-202ENST00000355451 MT1BP07438 61 aa3.48□□□□□ -1.85
NUDCD3-202ENST00000355451 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
NUDCD3-202ENST00000355451 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
NUDCD3-202ENST00000355451 HYDINQ4G0P3 5121 aa3.46□□□□□ -1.86
NUDCD3-202ENST00000355451 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
NUDCD3-202ENST00000355451 MT1EP04732 61 aa3.4□□□□□ -1.86
NUDCD3-202ENST00000355451 KRTAP9-3Q9BYQ3 159 aa3.4□□□□□ -1.87
NUDCD3-202ENST00000355451 MT1MQ8N339 61 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms