RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
GFRA1-201ENST00000355422 RYR3Q15413 4870 aa7.49□□□□□ -1.21
GFRA1-201ENST00000355422 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
GFRA1-201ENST00000355422 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
GFRA1-201ENST00000355422 KRTAP13-4Q3LI77 160 aa7.45□□□□□ -1.22
GFRA1-201ENST00000355422 LRP1Q07954 4544 aaKnown RBP7.44□□□□□ -1.22
GFRA1-201ENST00000355422 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
GFRA1-201ENST00000355422 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
GFRA1-201ENST00000355422 RYR2Q92736 4967 aa7.43□□□□□ -1.22
GFRA1-201ENST00000355422 TNXBP22105 4242 aa7.42□□□□□ -1.22
GFRA1-201ENST00000355422 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
GFRA1-201ENST00000355422 A0A0D9SG42 100 aa7.42□□□□□ -1.22
GFRA1-201ENST00000355422 LCE2DQ5TA82 110 aaPredicted RBP7.41□□□□□ -1.22
GFRA1-201ENST00000355422 HSPG2P98160 4391 aa7.4□□□□□ -1.23
GFRA1-201ENST00000355422 ROMO1P60602 79 aa7.4□□□□□ -1.23
GFRA1-201ENST00000355422 XP32Q5T750 250 aa7.39□□□□□ -1.23
GFRA1-201ENST00000355422 S4R3F8 94 aa7.39□□□□□ -1.23
GFRA1-201ENST00000355422 P0C880 135 aa7.33□□□□□ -1.24
GFRA1-201ENST00000355422 Q5VSD8 79 aa7.32□□□□□ -1.24
GFRA1-201ENST00000355422 MYCBP2O75592 4640 aa7.32□□□□□ -1.24
GFRA1-201ENST00000355422 SEC61BP60468 96 aaKnown RBP7.32□□□□□ -1.24
GFRA1-201ENST00000355422 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
GFRA1-201ENST00000355422 EPPK1P58107 5090 aaKnown RBP7.24□□□□□ -1.25
GFRA1-201ENST00000355422 KRTAP12-2P59991 146 aa7.21□□□□□ -1.25
GFRA1-201ENST00000355422 KRTAP17-1Q9BYP8 105 aa7.21□□□□□ -1.26
GFRA1-201ENST00000355422 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
GFRA1-201ENST00000355422 LPAP08519 4548 aa7.16□□□□□ -1.26
GFRA1-201ENST00000355422 MT1HL1P0DM35 61 aa7.15□□□□□ -1.26
GFRA1-201ENST00000355422 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
GFRA1-201ENST00000355422 KRTAP12-1P59990 96 aa7.14□□□□□ -1.27
GFRA1-201ENST00000355422 RYR1P21817 5038 aa7.12□□□□□ -1.27
GFRA1-201ENST00000355422 KIAA1109Q2LD37 5005 aa7.09□□□□□ -1.27
GFRA1-201ENST00000355422 LRP2P98164 4655 aa7.06□□□□□ -1.28
GFRA1-201ENST00000355422 M0QZ58 72 aa7.04□□□□□ -1.28
GFRA1-201ENST00000355422 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
GFRA1-201ENST00000355422 KRTAP15-1Q3LI76 137 aa6.95□□□□□ -1.3
GFRA1-201ENST00000355422 R4GN34 69 aa6.88□□□□□ -1.31
GFRA1-201ENST00000355422 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
GFRA1-201ENST00000355422 NDUFAF8A1L188 74 aa6.85□□□□□ -1.31
GFRA1-201ENST00000355422 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
GFRA1-201ENST00000355422 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.33
GFRA1-201ENST00000355422 BIRC6Q9NR09 4857 aa6.77□□□□□ -1.33
GFRA1-201ENST00000355422 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
GFRA1-201ENST00000355422 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
GFRA1-201ENST00000355422 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.34
GFRA1-201ENST00000355422 HERC2O95714 4834 aa6.69□□□□□ -1.34
GFRA1-201ENST00000355422 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
GFRA1-201ENST00000355422 LCE2CQ5TA81 110 aa6.65□□□□□ -1.34
GFRA1-201ENST00000355422 KRTAP19-2Q3LHN2 52 aa6.61□□□□□ -1.35
GFRA1-201ENST00000355422 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
GFRA1-201ENST00000355422 HERC1Q15751 4861 aa6.57□□□□□ -1.36
GFRA1-201ENST00000355422 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
GFRA1-201ENST00000355422 LCE2BO14633 110 aa6.53□□□□□ -1.36
GFRA1-201ENST00000355422 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
GFRA1-201ENST00000355422 MUC2Q02817 5179 aa6.45□□□□□ -1.38
GFRA1-201ENST00000355422 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
GFRA1-201ENST00000355422 TNP1P09430 55 aa6.3□□□□□ -1.4
GFRA1-201ENST00000355422 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
GFRA1-201ENST00000355422 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
GFRA1-201ENST00000355422 UBR4Q5T4S7 5183 aa6.22□□□□□ -1.41
GFRA1-201ENST00000355422 RNF213Q63HN8 5207 aa6.21□□□□□ -1.42
GFRA1-201ENST00000355422 FAT4Q6V0I7 4981 aa6.11□□□□□ -1.43
GFRA1-201ENST00000355422 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
GFRA1-201ENST00000355422 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
GFRA1-201ENST00000355422 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
GFRA1-201ENST00000355422 M0R2T5 61 aa6.04□□□□□ -1.44
GFRA1-201ENST00000355422 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
GFRA1-201ENST00000355422 MT1HP80294 61 aa5.97□□□□□ -1.45
GFRA1-201ENST00000355422 MT1FP04733 61 aa5.94□□□□□ -1.46
GFRA1-201ENST00000355422 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
GFRA1-201ENST00000355422 MT2AP02795 61 aa5.92□□□□□ -1.46
GFRA1-201ENST00000355422 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
GFRA1-201ENST00000355422 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
GFRA1-201ENST00000355422 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
GFRA1-201ENST00000355422 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
GFRA1-201ENST00000355422 MT1BP07438 61 aa5.76□□□□□ -1.49
GFRA1-201ENST00000355422 MT1XP80297 61 aa5.76□□□□□ -1.49
GFRA1-201ENST00000355422 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
GFRA1-201ENST00000355422 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
GFRA1-201ENST00000355422 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
GFRA1-201ENST00000355422 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
GFRA1-201ENST00000355422 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
GFRA1-201ENST00000355422 INE1O15225 51 aa5.45□□□□□ -1.54
GFRA1-201ENST00000355422 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
GFRA1-201ENST00000355422 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
GFRA1-201ENST00000355422 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
GFRA1-201ENST00000355422 FSIP2Q5CZC0 6907 aa5.33□□□□□ -1.56
GFRA1-201ENST00000355422 KMT2DO14686 5537 aa5.31□□□□□ -1.56
GFRA1-201ENST00000355422 USH2AO75445 5202 aa5.31□□□□□ -1.56
GFRA1-201ENST00000355422 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
GFRA1-201ENST00000355422 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
GFRA1-201ENST00000355422 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
GFRA1-201ENST00000355422 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
GFRA1-201ENST00000355422 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
GFRA1-201ENST00000355422 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
GFRA1-201ENST00000355422 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
GFRA1-201ENST00000355422 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
GFRA1-201ENST00000355422 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
GFRA1-201ENST00000355422 MT1LQ93083 61 aa4.99□□□□□ -1.61
GFRA1-201ENST00000355422 MT1EP04732 61 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms