RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 PRKDCP78527 4128 aaKnown RBP4.95□□□□□ -1.62
SLC6A20-201ENST00000353278 KRTAP3-3Q9BYR6 98 aa4.94□□□□□ -1.62
SLC6A20-201ENST00000353278 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
SLC6A20-201ENST00000353278 KRTAP3-2Q9BYR7 98 aa4.92□□□□□ -1.62
SLC6A20-201ENST00000353278 STARD9Q9P2P6 4700 aa4.91□□□□□ -1.62
SLC6A20-201ENST00000353278 DNAH11Q96DT5 4516 aa4.87□□□□□ -1.63
SLC6A20-201ENST00000353278 DNAH1Q9P2D7 4330 aa4.87□□□□□ -1.63
SLC6A20-201ENST00000353278 CMYA5Q8N3K9 4069 aa4.85□□□□□ -1.63
SLC6A20-201ENST00000353278 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
SLC6A20-201ENST00000353278 VPS13DQ5THJ4 4388 aa4.81□□□□□ -1.64
SLC6A20-201ENST00000353278 LYSTQ99698 3801 aa4.79□□□□□ -1.64
SLC6A20-201ENST00000353278 KMT2AQ03164 3969 aa4.79□□□□□ -1.64
SLC6A20-201ENST00000353278 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
SLC6A20-201ENST00000353278 DNAH5Q8TE73 4624 aa4.79□□□□□ -1.64
SLC6A20-201ENST00000353278 ALMS1Q8TCU4 4167 aa4.78□□□□□ -1.64
SLC6A20-201ENST00000353278 DNAH3Q8TD57 4116 aa4.75□□□□□ -1.65
SLC6A20-201ENST00000353278 FAT1Q14517 4588 aa4.75□□□□□ -1.65
SLC6A20-201ENST00000353278 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
SLC6A20-201ENST00000353278 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
SLC6A20-201ENST00000353278 LRP1BQ9NZR2 4599 aa4.71□□□□□ -1.65
SLC6A20-201ENST00000353278 DNAH17Q9UFH2 4485 aa4.71□□□□□ -1.66
SLC6A20-201ENST00000353278 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
SLC6A20-201ENST00000353278 DNAH7Q8WXX0 4024 aa4.68□□□□□ -1.66
SLC6A20-201ENST00000353278 DNAH2Q9P225 4427 aa4.67□□□□□ -1.66
SLC6A20-201ENST00000353278 DYNC1H1Q14204 4646 aaKnown RBP4.67□□□□□ -1.66
SLC6A20-201ENST00000353278 MT1HP80294 61 aa4.66□□□□□ -1.66
SLC6A20-201ENST00000353278 DNAH8Q96JB1 4490 aa4.65□□□□□ -1.67
SLC6A20-201ENST00000353278 INE1O15225 51 aa4.65□□□□□ -1.67
SLC6A20-201ENST00000353278 KRTAP4-1Q9BYQ7 146 aa4.62□□□□□ -1.67
SLC6A20-201ENST00000353278 DYNC2H1Q8NCM8 4307 aaKnown RBP4.61□□□□□ -1.67
SLC6A20-201ENST00000353278 KIAA1109Q2LD37 5005 aa4.6□□□□□ -1.67
SLC6A20-201ENST00000353278 MT2AP02795 61 aa4.59□□□□□ -1.68
SLC6A20-201ENST00000353278 DNAH6Q9C0G6 4158 aa4.58□□□□□ -1.68
SLC6A20-201ENST00000353278 HYDINQ4G0P3 5121 aa4.56□□□□□ -1.68
SLC6A20-201ENST00000353278 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
SLC6A20-201ENST00000353278 RYR1P21817 5038 aa4.54□□□□□ -1.68
SLC6A20-201ENST00000353278 VPS13BQ7Z7G8 4022 aa4.53□□□□□ -1.68
SLC6A20-201ENST00000353278 MYCBP2O75592 4640 aa4.52□□□□□ -1.69
SLC6A20-201ENST00000353278 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
SLC6A20-201ENST00000353278 HECTD4Q9Y4D8 3996 aa4.5□□□□□ -1.69
SLC6A20-201ENST00000353278 SACSQ9NZJ4 4579 aa4.5□□□□□ -1.69
SLC6A20-201ENST00000353278 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
SLC6A20-201ENST00000353278 RYR3Q15413 4870 aa4.49□□□□□ -1.69
SLC6A20-201ENST00000353278 PKHD1P08F94 4074 aa4.49□□□□□ -1.69
SLC6A20-201ENST00000353278 LRP1Q07954 4544 aaKnown RBP4.48□□□□□ -1.69
SLC6A20-201ENST00000353278 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
SLC6A20-201ENST00000353278 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
SLC6A20-201ENST00000353278 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
SLC6A20-201ENST00000353278 MT1FP04733 61 aa4.46□□□□□ -1.7
SLC6A20-201ENST00000353278 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
SLC6A20-201ENST00000353278 KRTAP17-1Q9BYP8 105 aa4.43□□□□□ -1.7
SLC6A20-201ENST00000353278 FAT3Q8TDW7 4589 aa4.43□□□□□ -1.7
SLC6A20-201ENST00000353278 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
SLC6A20-201ENST00000353278 RYR2Q92736 4967 aa4.41□□□□□ -1.7
SLC6A20-201ENST00000353278 PKD1P98161 4303 aa4.3□□□□□ -1.72
SLC6A20-201ENST00000353278 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
SLC6A20-201ENST00000353278 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
SLC6A20-201ENST00000353278 LRP2P98164 4655 aa4.24□□□□□ -1.73
SLC6A20-201ENST00000353278 HERC2O95714 4834 aa4.24□□□□□ -1.73
SLC6A20-201ENST00000353278 HSPG2P98160 4391 aa4.23□□□□□ -1.73
SLC6A20-201ENST00000353278 SPRR2EP22531 72 aa4.23□□□□□ -1.73
SLC6A20-201ENST00000353278 SPRR2BP35325 72 aa4.23□□□□□ -1.73
SLC6A20-201ENST00000353278 SPRR2AP35326 72 aa4.23□□□□□ -1.73
SLC6A20-201ENST00000353278 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
SLC6A20-201ENST00000353278 EPPK1P58107 5090 aaKnown RBP4.18□□□□□ -1.74
SLC6A20-201ENST00000353278 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
SLC6A20-201ENST00000353278 KRTAP19-1Q8IUB9 90 aa4.14□□□□□ -1.75
SLC6A20-201ENST00000353278 SPRR2DP22532 72 aa4.1□□□□□ -1.75
SLC6A20-201ENST00000353278 LPAP08519 4548 aa4.09□□□□□ -1.76
SLC6A20-201ENST00000353278 LCE2BO14633 110 aa4.07□□□□□ -1.76
SLC6A20-201ENST00000353278 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
SLC6A20-201ENST00000353278 BIRC6Q9NR09 4857 aa4.05□□□□□ -1.76
SLC6A20-201ENST00000353278 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
SLC6A20-201ENST00000353278 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
SLC6A20-201ENST00000353278 MT1XP80297 61 aa4.02□□□□□ -1.77
SLC6A20-201ENST00000353278 MT1BP07438 61 aa4.02□□□□□ -1.77
SLC6A20-201ENST00000353278 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
SLC6A20-201ENST00000353278 HERC1Q15751 4861 aa4.01□□□□□ -1.77
SLC6A20-201ENST00000353278 TNXBP22105 4242 aa3.98□□□□□ -1.77
SLC6A20-201ENST00000353278 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
SLC6A20-201ENST00000353278 MT1GP13640 62 aa3.97□□□□□ -1.77
SLC6A20-201ENST00000353278 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
SLC6A20-201ENST00000353278 LCE2CQ5TA81 110 aa3.95□□□□□ -1.78
SLC6A20-201ENST00000353278 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
SLC6A20-201ENST00000353278 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
SLC6A20-201ENST00000353278 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
SLC6A20-201ENST00000353278 MUC2Q02817 5179 aa3.86□□□□□ -1.79
SLC6A20-201ENST00000353278 RNF213Q63HN8 5207 aa3.82□□□□□ -1.8
SLC6A20-201ENST00000353278 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
SLC6A20-201ENST00000353278 KRTAP9-2Q9BYQ4 174 aa3.79□□□□□ -1.8
SLC6A20-201ENST00000353278 KRTAP19-2Q3LHN2 52 aa3.78□□□□□ -1.8
SLC6A20-201ENST00000353278 LCE2DQ5TA82 110 aaPredicted RBP3.77□□□□□ -1.81
SLC6A20-201ENST00000353278 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
SLC6A20-201ENST00000353278 UBR4Q5T4S7 5183 aa3.74□□□□□ -1.81
SLC6A20-201ENST00000353278 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
SLC6A20-201ENST00000353278 MUC17Q685J3 4493 aa3.73□□□□□ -1.81
SLC6A20-201ENST00000353278 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
SLC6A20-201ENST00000353278 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
SLC6A20-201ENST00000353278 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
SLC6A20-201ENST00000353278 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms