RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 PP632Q6XCG6 107 aa9.28□□□□□ -0.92
RNF38-202ENST00000350199 KRTAP10-6P60371 365 aaPredicted RBP9.28□□□□□ -0.92
RNF38-202ENST00000350199 CMYA5Q8N3K9 4069 aa9.25□□□□□ -0.93
RNF38-202ENST00000350199 DYNC1H1Q14204 4646 aaKnown RBP9.22□□□□□ -0.93
RNF38-202ENST00000350199 KRTAP12-1P59990 96 aa9.21□□□□□ -0.94
RNF38-202ENST00000350199 KRTAP13-4Q3LI77 160 aa9.21□□□□□ -0.94
RNF38-202ENST00000350199 DNAH2Q9P225 4427 aa9.2□□□□□ -0.94
RNF38-202ENST00000350199 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
RNF38-202ENST00000350199 A0A0A0MQY5 61 aa9.18□□□□□ -0.94
RNF38-202ENST00000350199 KRTAP3-3Q9BYR6 98 aa9.17□□□□□ -0.94
RNF38-202ENST00000350199 KMT2AQ03164 3969 aa9.16□□□□□ -0.94
RNF38-202ENST00000350199 FAT1Q14517 4588 aa9.12□□□□□ -0.95
RNF38-202ENST00000350199 NDUFAF8A1L188 74 aa9.11□□□□□ -0.95
RNF38-202ENST00000350199 DYNC2H1Q8NCM8 4307 aaKnown RBP9.08□□□□□ -0.96
RNF38-202ENST00000350199 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
RNF38-202ENST00000350199 DNAH8Q96JB1 4490 aa9.04□□□□□ -0.96
RNF38-202ENST00000350199 PRO2289Q9P1D8 64 aa9.03□□□□□ -0.96
RNF38-202ENST00000350199 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.97
RNF38-202ENST00000350199 LYSTQ99698 3801 aa8.92□□□□□ -0.98
RNF38-202ENST00000350199 SACSQ9NZJ4 4579 aa8.92□□□□□ -0.98
RNF38-202ENST00000350199 VPS13BQ7Z7G8 4022 aa8.83□□□□□ -1
RNF38-202ENST00000350199 RYR1P21817 5038 aa8.83□□□□□ -1
RNF38-202ENST00000350199 DNAH7Q8WXX0 4024 aa8.81□□□□□ -1
RNF38-202ENST00000350199 DNAH6Q9C0G6 4158 aa8.79□□□□□ -1
RNF38-202ENST00000350199 HECTD4Q9Y4D8 3996 aa8.77□□□□□ -1.01
RNF38-202ENST00000350199 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
RNF38-202ENST00000350199 FRAS1Q86XX4 4008 aa8.7□□□□□ -1.02
RNF38-202ENST00000350199 RYR3Q15413 4870 aa8.65□□□□□ -1.02
RNF38-202ENST00000350199 KRTAP4-1Q9BYQ7 146 aa8.65□□□□□ -1.02
RNF38-202ENST00000350199 HYDINQ4G0P3 5121 aa8.64□□□□□ -1.03
RNF38-202ENST00000350199 APOBP04114 4563 aaKnown RBP8.63□□□□□ -1.03
RNF38-202ENST00000350199 RYR2Q92736 4967 aa8.62□□□□□ -1.03
RNF38-202ENST00000350199 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
RNF38-202ENST00000350199 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
RNF38-202ENST00000350199 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
RNF38-202ENST00000350199 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
RNF38-202ENST00000350199 PKHD1P08F94 4074 aa8.41□□□□□ -1.06
RNF38-202ENST00000350199 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
RNF38-202ENST00000350199 PKD1P98161 4303 aa8.3□□□□□ -1.08
RNF38-202ENST00000350199 MT1HP80294 61 aa8.27□□□□□ -1.08
RNF38-202ENST00000350199 HSPG2P98160 4391 aa8.27□□□□□ -1.08
RNF38-202ENST00000350199 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
RNF38-202ENST00000350199 KRTAP15-1Q3LI76 137 aa8.26□□□□□ -1.09
RNF38-202ENST00000350199 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.1
RNF38-202ENST00000350199 HERC2O95714 4834 aa8.19□□□□□ -1.1
RNF38-202ENST00000350199 MT2AP02795 61 aa8.12□□□□□ -1.11
RNF38-202ENST00000350199 KRTAP23-1A1A580 65 aa8.1□□□□□ -1.11
RNF38-202ENST00000350199 LCE3AQ5TA76 89 aa8.09□□□□□ -1.12
RNF38-202ENST00000350199 BIRC6Q9NR09 4857 aa8.08□□□□□ -1.12
RNF38-202ENST00000350199 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
RNF38-202ENST00000350199 KRTAP12-3P60328 96 aa8.03□□□□□ -1.12
RNF38-202ENST00000350199 LRP2P98164 4655 aa8.02□□□□□ -1.12
RNF38-202ENST00000350199 MT1FP04733 61 aa8.01□□□□□ -1.13
RNF38-202ENST00000350199 PKHD1L1Q86WI1 4243 aa7.86□□□□□ -1.15
RNF38-202ENST00000350199 TNXBP22105 4242 aa7.86□□□□□ -1.15
RNF38-202ENST00000350199 EPPK1P58107 5090 aaKnown RBP7.85□□□□□ -1.15
RNF38-202ENST00000350199 LPAP08519 4548 aa7.82□□□□□ -1.16
RNF38-202ENST00000350199 HERC1Q15751 4861 aa7.75□□□□□ -1.17
RNF38-202ENST00000350199 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
RNF38-202ENST00000350199 ABCA13Q86UQ4 5058 aa7.71□□□□□ -1.18
RNF38-202ENST00000350199 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
RNF38-202ENST00000350199 PCLOQ9Y6V0 5065 aa7.65□□□□□ -1.18
RNF38-202ENST00000350199 KRTAP8-1Q8IUC2 63 aa7.61□□□□□ -1.19
RNF38-202ENST00000350199 CRCT1Q9UGL9 99 aa7.61□□□□□ -1.19
RNF38-202ENST00000350199 KRTAP19-8Q3LI54 63 aa7.59□□□□□ -1.19
RNF38-202ENST00000350199 KRTAP9-8Q9BYQ0 159 aa7.57□□□□□ -1.2
RNF38-202ENST00000350199 KRTAP19-2Q3LHN2 52 aa7.52□□□□□ -1.21
RNF38-202ENST00000350199 MT1BP07438 61 aa7.42□□□□□ -1.22
RNF38-202ENST00000350199 KRTAP19-5Q3LI72 72 aa7.4□□□□□ -1.23
RNF38-202ENST00000350199 MT1XP80297 61 aa7.38□□□□□ -1.23
RNF38-202ENST00000350199 KRTAP10-7P60409 375 aaPredicted RBP7.37□□□□□ -1.23
RNF38-202ENST00000350199 MUC17Q685J3 4493 aa7.36□□□□□ -1.23
RNF38-202ENST00000350199 INE1O15225 51 aa7.35□□□□□ -1.23
RNF38-202ENST00000350199 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
RNF38-202ENST00000350199 FLGP20930 4061 aaPredicted RBP7.33□□□□□ -1.24
RNF38-202ENST00000350199 KRTAP10-5P60370 271 aa7.33□□□□□ -1.24
RNF38-202ENST00000350199 LCE3CQ5T5A8 94 aa7.17□□□□□ -1.26
RNF38-202ENST00000350199 RNF213Q63HN8 5207 aa7.16□□□□□ -1.26
RNF38-202ENST00000350199 SPRR2FQ96RM1 72 aa7.15□□□□□ -1.26
RNF38-202ENST00000350199 FAT4Q6V0I7 4981 aa7.1□□□□□ -1.27
RNF38-202ENST00000350199 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.28
RNF38-202ENST00000350199 LCE2BO14633 110 aa7.06□□□□□ -1.28
RNF38-202ENST00000350199 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
RNF38-202ENST00000350199 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
RNF38-202ENST00000350199 KRTAP19-4Q3LI73 84 aa6.99□□□□□ -1.29
RNF38-202ENST00000350199 MUC2Q02817 5179 aa6.94□□□□□ -1.3
RNF38-202ENST00000350199 UBR4Q5T4S7 5183 aa6.93□□□□□ -1.3
RNF38-202ENST00000350199 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
RNF38-202ENST00000350199 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
RNF38-202ENST00000350199 SPRR2EP22531 72 aa6.67□□□□□ -1.34
RNF38-202ENST00000350199 SPRR2BP35325 72 aa6.67□□□□□ -1.34
RNF38-202ENST00000350199 SPRR2AP35326 72 aa6.67□□□□□ -1.34
RNF38-202ENST00000350199 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.34
RNF38-202ENST00000350199 MT1GP13640 62 aa6.64□□□□□ -1.35
RNF38-202ENST00000350199 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
RNF38-202ENST00000350199 MT1EP04732 61 aa6.57□□□□□ -1.36
RNF38-202ENST00000350199 MT1LQ93083 61 aa6.56□□□□□ -1.36
RNF38-202ENST00000350199 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
RNF38-202ENST00000350199 KRTAP19-3Q7Z4W3 81 aa6.51□□□□□ -1.37
RNF38-202ENST00000350199 SPRR2DP22532 72 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms