RNA–Protein interactions for RNA: ENST00000345097.8

FOXN3-202, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXN3, Length 7,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-202ENST00000345097 PLECQ15149 4684 aaKnown RBP4.42□□□□□ -1.7
FOXN3-202ENST00000345097 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
FOXN3-202ENST00000345097 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
FOXN3-202ENST00000345097 STARD9Q9P2P6 4700 aa4.39□□□□□ -1.71
FOXN3-202ENST00000345097 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
FOXN3-202ENST00000345097 DNAH2Q9P225 4427 aa4.38□□□□□ -1.71
FOXN3-202ENST00000345097 DNAH6Q9C0G6 4158 aa4.38□□□□□ -1.71
FOXN3-202ENST00000345097 KRTAP4-5Q9BYR2 181 aa4.37□□□□□ -1.71
FOXN3-202ENST00000345097 VPS13DQ5THJ4 4388 aa4.33□□□□□ -1.72
FOXN3-202ENST00000345097 DNAH11Q96DT5 4516 aa4.32□□□□□ -1.72
FOXN3-202ENST00000345097 MT1HL1P0DM35 61 aa4.31□□□□□ -1.72
FOXN3-202ENST00000345097 FAT2Q9NYQ8 4349 aa4.28□□□□□ -1.72
FOXN3-202ENST00000345097 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-202ENST00000345097 DYNC2H1Q8NCM8 4307 aaKnown RBP4.27□□□□□ -1.73
FOXN3-202ENST00000345097 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
FOXN3-202ENST00000345097 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-202ENST00000345097 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
FOXN3-202ENST00000345097 INE1O15225 51 aa4.18□□□□□ -1.74
FOXN3-202ENST00000345097 KRTAP3-3Q9BYR6 98 aa4.18□□□□□ -1.74
FOXN3-202ENST00000345097 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
FOXN3-202ENST00000345097 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.74
FOXN3-202ENST00000345097 LRP1BQ9NZR2 4599 aa4.14□□□□□ -1.75
FOXN3-202ENST00000345097 DNAH5Q8TE73 4624 aa4.13□□□□□ -1.75
FOXN3-202ENST00000345097 PKHD1P08F94 4074 aa4.1□□□□□ -1.75
FOXN3-202ENST00000345097 KRTAP3-2Q9BYR7 98 aa4.1□□□□□ -1.75
FOXN3-202ENST00000345097 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
FOXN3-202ENST00000345097 LORP23490 312 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-202ENST00000345097 FAT1Q14517 4588 aa3.99□□□□□ -1.77
FOXN3-202ENST00000345097 PKD1P98161 4303 aa3.97□□□□□ -1.77
FOXN3-202ENST00000345097 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
FOXN3-202ENST00000345097 KRTAP10-12P60413 245 aa3.94□□□□□ -1.78
FOXN3-202ENST00000345097 DNHD1Q96M86 4753 aa3.94□□□□□ -1.78
FOXN3-202ENST00000345097 SACSQ9NZJ4 4579 aa3.91□□□□□ -1.78
FOXN3-202ENST00000345097 HSPG2P98160 4391 aa3.91□□□□□ -1.78
FOXN3-202ENST00000345097 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.78
FOXN3-202ENST00000345097 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-202ENST00000345097 TNXBP22105 4242 aa3.88□□□□□ -1.79
FOXN3-202ENST00000345097 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
FOXN3-202ENST00000345097 APOBP04114 4563 aaKnown RBP3.85□□□□□ -1.79
FOXN3-202ENST00000345097 HYDINQ4G0P3 5121 aa3.85□□□□□ -1.79
FOXN3-202ENST00000345097 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
FOXN3-202ENST00000345097 KRTAP17-1Q9BYP8 105 aa3.84□□□□□ -1.79
FOXN3-202ENST00000345097 PKHD1L1Q86WI1 4243 aa3.84□□□□□ -1.79
FOXN3-202ENST00000345097 LPAP08519 4548 aa3.84□□□□□ -1.8
FOXN3-202ENST00000345097 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
FOXN3-202ENST00000345097 MT1HP80294 61 aa3.79□□□□□ -1.8
FOXN3-202ENST00000345097 FAT3Q8TDW7 4589 aa3.79□□□□□ -1.8
FOXN3-202ENST00000345097 MYCBP2O75592 4640 aa3.73□□□□□ -1.81
FOXN3-202ENST00000345097 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
FOXN3-202ENST00000345097 MT2AP02795 61 aa3.66□□□□□ -1.82
FOXN3-202ENST00000345097 MT1FP04733 61 aa3.64□□□□□ -1.83
FOXN3-202ENST00000345097 RYR1P21817 5038 aa3.63□□□□□ -1.83
FOXN3-202ENST00000345097 SPRR2GQ9BYE4 73 aa3.59□□□□□ -1.83
FOXN3-202ENST00000345097 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
FOXN3-202ENST00000345097 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
FOXN3-202ENST00000345097 RYR3Q15413 4870 aa3.54□□□□□ -1.84
FOXN3-202ENST00000345097 LRP2P98164 4655 aa3.53□□□□□ -1.84
FOXN3-202ENST00000345097 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
FOXN3-202ENST00000345097 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
FOXN3-202ENST00000345097 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
FOXN3-202ENST00000345097 KMT2CQ8NEZ4 4911 aaKnown RBP3.43□□□□□ -1.86
FOXN3-202ENST00000345097 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
FOXN3-202ENST00000345097 RYR2Q92736 4967 aa3.42□□□□□ -1.86
FOXN3-202ENST00000345097 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
FOXN3-202ENST00000345097 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
FOXN3-202ENST00000345097 KRTAP9-8Q9BYQ0 159 aa3.37□□□□□ -1.87
FOXN3-202ENST00000345097 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
FOXN3-202ENST00000345097 LCE2CQ5TA81 110 aa3.35□□□□□ -1.87
FOXN3-202ENST00000345097 MT1XP80297 61 aa3.34□□□□□ -1.87
FOXN3-202ENST00000345097 SPRR2EP22531 72 aa3.32□□□□□ -1.88
FOXN3-202ENST00000345097 SPRR2BP35325 72 aa3.32□□□□□ -1.88
FOXN3-202ENST00000345097 SPRR2AP35326 72 aa3.32□□□□□ -1.88
FOXN3-202ENST00000345097 KRTAP19-8Q3LI54 63 aa3.31□□□□□ -1.88
FOXN3-202ENST00000345097 MT1BP07438 61 aa3.3□□□□□ -1.88
FOXN3-202ENST00000345097 KIAA1109Q2LD37 5005 aa3.29□□□□□ -1.88
FOXN3-202ENST00000345097 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
FOXN3-202ENST00000345097 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
FOXN3-202ENST00000345097 KRTAP9-3Q9BYQ3 159 aa3.26□□□□□ -1.89
FOXN3-202ENST00000345097 HERC2O95714 4834 aa3.22□□□□□ -1.89
FOXN3-202ENST00000345097 SPRR2DP22532 72 aa3.22□□□□□ -1.89
FOXN3-202ENST00000345097 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
FOXN3-202ENST00000345097 MT1GP13640 62 aa3.18□□□□□ -1.9
FOXN3-202ENST00000345097 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
FOXN3-202ENST00000345097 LCE2BO14633 110 aa3.16□□□□□ -1.9
FOXN3-202ENST00000345097 LCE3BQ5TA77 95 aa3.15□□□□□ -1.9
FOXN3-202ENST00000345097 EPPK1P58107 5090 aaKnown RBP3.15□□□□□ -1.91
FOXN3-202ENST00000345097 KRTAP4-7Q9BYR0 210 aa3.1□□□□□ -1.91
FOXN3-202ENST00000345097 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
FOXN3-202ENST00000345097 HERC1Q15751 4861 aa3.03□□□□□ -1.92
FOXN3-202ENST00000345097 LCE2DQ5TA82 110 aaPredicted RBP3□□□□□ -1.93
FOXN3-202ENST00000345097 ABCA13Q86UQ4 5058 aa2.99□□□□□ -1.93
FOXN3-202ENST00000345097 MUC2Q02817 5179 aa2.99□□□□□ -1.93
FOXN3-202ENST00000345097 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
FOXN3-202ENST00000345097 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
FOXN3-202ENST00000345097 MT1LQ93083 61 aa2.97□□□□□ -1.93
FOXN3-202ENST00000345097 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.93
FOXN3-202ENST00000345097 MT1EP04732 61 aa2.96□□□□□ -1.94
FOXN3-202ENST00000345097 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
FOXN3-202ENST00000345097 KRTAP9-2Q9BYQ4 174 aa2.95□□□□□ -1.94
FOXN3-202ENST00000345097 PCLOQ9Y6V0 5065 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms