RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 MT3P25713 68 aa2.69□□□□□ -1.98
PCDH18-201ENST00000344876 VPS13CQ709C8 3753 aa2.67□□□□□ -1.98
PCDH18-201ENST00000344876 KRTAP8-1Q8IUC2 63 aa2.67□□□□□ -1.98
PCDH18-201ENST00000344876 KRTAP10-7P60409 375 aaPredicted RBP2.65□□□□□ -1.99
PCDH18-201ENST00000344876 HUWE1Q7Z6Z7 4374 aaKnown RBP2.64□□□□□ -1.99
PCDH18-201ENST00000344876 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
PCDH18-201ENST00000344876 KRTAP4-1Q9BYQ7 146 aa2.55□□□□□ -2
PCDH18-201ENST00000344876 FAT1Q14517 4588 aa2.55□□□□□ -2
PCDH18-201ENST00000344876 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
PCDH18-201ENST00000344876 DNAH5Q8TE73 4624 aa2.5□□□□□ -2.01
PCDH18-201ENST00000344876 BSNQ9UPA5 3926 aa2.49□□□□□ -2.01
PCDH18-201ENST00000344876 SPRR2FQ96RM1 72 aa2.49□□□□□ -2.01
PCDH18-201ENST00000344876 MT1HP80294 61 aa2.47□□□□□ -2.01
PCDH18-201ENST00000344876 DNAH10Q8IVF4 4471 aa2.47□□□□□ -2.01
PCDH18-201ENST00000344876 DNAH8Q96JB1 4490 aa2.46□□□□□ -2.02
PCDH18-201ENST00000344876 MT2AP02795 61 aa2.46□□□□□ -2.02
PCDH18-201ENST00000344876 LCE3CQ5T5A8 94 aa2.46□□□□□ -2.02
PCDH18-201ENST00000344876 DNAH2Q9P225 4427 aa2.46□□□□□ -2.02
PCDH18-201ENST00000344876 PLECQ15149 4684 aaKnown RBP2.45□□□□□ -2.02
PCDH18-201ENST00000344876 DNAH11Q96DT5 4516 aa2.45□□□□□ -2.02
PCDH18-201ENST00000344876 DNAH1Q9P2D7 4330 aa2.44□□□□□ -2.02
PCDH18-201ENST00000344876 MT1FP04733 61 aa2.43□□□□□ -2.02
PCDH18-201ENST00000344876 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
PCDH18-201ENST00000344876 LCE3BQ5TA77 95 aa2.43□□□□□ -2.02
PCDH18-201ENST00000344876 DNAH9Q9NYC9 4486 aa2.41□□□□□ -2.02
PCDH18-201ENST00000344876 ALMS1Q8TCU4 4167 aa2.41□□□□□ -2.02
PCDH18-201ENST00000344876 SPRR2GQ9BYE4 73 aa2.4□□□□□ -2.02
PCDH18-201ENST00000344876 ZNF469Q96JG9 3925 aaPredicted RBP2.38□□□□□ -2.03
PCDH18-201ENST00000344876 AKAP9Q99996 3911 aa2.38□□□□□ -2.03
PCDH18-201ENST00000344876 DNAH17Q9UFH2 4485 aa2.37□□□□□ -2.03
PCDH18-201ENST00000344876 LCE2CQ5TA81 110 aa2.36□□□□□ -2.03
PCDH18-201ENST00000344876 MT1GP13640 62 aa2.35□□□□□ -2.03
PCDH18-201ENST00000344876 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
PCDH18-201ENST00000344876 APOBP04114 4563 aaKnown RBP2.34□□□□□ -2.04
PCDH18-201ENST00000344876 RYR1P21817 5038 aa2.32□□□□□ -2.04
PCDH18-201ENST00000344876 LRP1BQ9NZR2 4599 aa2.32□□□□□ -2.04
PCDH18-201ENST00000344876 SACSQ9NZJ4 4579 aa2.31□□□□□ -2.04
PCDH18-201ENST00000344876 ANK2Q01484 3957 aa2.31□□□□□ -2.04
PCDH18-201ENST00000344876 DYNC1H1Q14204 4646 aaKnown RBP2.3□□□□□ -2.04
PCDH18-201ENST00000344876 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
PCDH18-201ENST00000344876 VPS13BQ7Z7G8 4022 aa2.3□□□□□ -2.04
PCDH18-201ENST00000344876 SPRR2EP22531 72 aa2.3□□□□□ -2.04
PCDH18-201ENST00000344876 SPRR2BP35325 72 aa2.3□□□□□ -2.04
PCDH18-201ENST00000344876 SPRR2AP35326 72 aa2.3□□□□□ -2.04
PCDH18-201ENST00000344876 KRTAP4-8A0A0G2JLE6 195 aa2.28□□□□□ -2.04
PCDH18-201ENST00000344876 KRTAP4-8Q9BYQ9 185 aa2.28□□□□□ -2.04
PCDH18-201ENST00000344876 DNHD1Q96M86 4753 aa2.27□□□□□ -2.05
PCDH18-201ENST00000344876 LYSTQ99698 3801 aa2.26□□□□□ -2.05
PCDH18-201ENST00000344876 FRAS1Q86XX4 4008 aa2.25□□□□□ -2.05
PCDH18-201ENST00000344876 STARD9Q9P2P6 4700 aa2.25□□□□□ -2.05
PCDH18-201ENST00000344876 KRTAP19-1Q8IUB9 90 aa2.24□□□□□ -2.05
PCDH18-201ENST00000344876 FAT3Q8TDW7 4589 aa2.24□□□□□ -2.05
PCDH18-201ENST00000344876 VPS13DQ5THJ4 4388 aa2.24□□□□□ -2.05
PCDH18-201ENST00000344876 FAT2Q9NYQ8 4349 aa2.24□□□□□ -2.05
PCDH18-201ENST00000344876 MT1XP80297 61 aa2.23□□□□□ -2.05
PCDH18-201ENST00000344876 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
PCDH18-201ENST00000344876 PRM1P04553 51 aa2.22□□□□□ -2.05
PCDH18-201ENST00000344876 KMT2AQ03164 3969 aa2.22□□□□□ -2.05
PCDH18-201ENST00000344876 KRTAP4-7Q9BYR0 210 aa2.22□□□□□ -2.05
PCDH18-201ENST00000344876 SPRR2DP22532 72 aa2.2□□□□□ -2.06
PCDH18-201ENST00000344876 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
PCDH18-201ENST00000344876 LCE2BO14633 110 aa2.19□□□□□ -2.06
PCDH18-201ENST00000344876 DNAH3Q8TD57 4116 aa2.18□□□□□ -2.06
PCDH18-201ENST00000344876 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
PCDH18-201ENST00000344876 KRTAP19-8Q3LI54 63 aa2.17□□□□□ -2.06
PCDH18-201ENST00000344876 MT1BP07438 61 aa2.17□□□□□ -2.06
PCDH18-201ENST00000344876 LRP1Q07954 4544 aaKnown RBP2.15□□□□□ -2.07
PCDH18-201ENST00000344876 BIRC6Q9NR09 4857 aa2.14□□□□□ -2.07
PCDH18-201ENST00000344876 LCE2DQ5TA82 110 aaPredicted RBP2.14□□□□□ -2.07
PCDH18-201ENST00000344876 RYR3Q15413 4870 aa2.12□□□□□ -2.07
PCDH18-201ENST00000344876 LCE2AQ5TA79 106 aaPredicted RBP2.1□□□□□ -2.07
PCDH18-201ENST00000344876 KRTAP9-8Q9BYQ0 159 aa2.1□□□□□ -2.07
PCDH18-201ENST00000344876 PRKDCP78527 4128 aaKnown RBP2.1□□□□□ -2.07
PCDH18-201ENST00000344876 DNAH6Q9C0G6 4158 aa2.09□□□□□ -2.07
PCDH18-201ENST00000344876 LOC100996750A0A140TA64 210 aa2.09□□□□□ -2.07
PCDH18-201ENST00000344876 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
PCDH18-201ENST00000344876 DNAH7Q8WXX0 4024 aa2.09□□□□□ -2.07
PCDH18-201ENST00000344876 LPAP08519 4548 aa2.08□□□□□ -2.08
PCDH18-201ENST00000344876 LRP2P98164 4655 aa2.07□□□□□ -2.08
PCDH18-201ENST00000344876 KRTAP9-6A0A140TA67 174 aa2.05□□□□□ -2.08
PCDH18-201ENST00000344876 MT4P47944 62 aa2.05□□□□□ -2.08
PCDH18-201ENST00000344876 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
PCDH18-201ENST00000344876 CMYA5Q8N3K9 4069 aa2.05□□□□□ -2.08
PCDH18-201ENST00000344876 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
PCDH18-201ENST00000344876 KRTAP9-3Q9BYQ3 159 aa2.05□□□□□ -2.08
PCDH18-201ENST00000344876 MT1LQ93083 61 aa2.04□□□□□ -2.08
PCDH18-201ENST00000344876 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
PCDH18-201ENST00000344876 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
PCDH18-201ENST00000344876 HECTD4Q9Y4D8 3996 aa2.01□□□□□ -2.09
PCDH18-201ENST00000344876 LCE1DQ5T752 114 aa2.01□□□□□ -2.09
PCDH18-201ENST00000344876 KRTAP4-9Q9BYQ8 210 aa2.01□□□□□ -2.09
PCDH18-201ENST00000344876 KRTAP9-2Q9BYQ4 174 aa2.01□□□□□ -2.09
PCDH18-201ENST00000344876 MT1EP04732 61 aa2□□□□□ -2.09
PCDH18-201ENST00000344876 PKD1P98161 4303 aa2□□□□□ -2.09
PCDH18-201ENST00000344876 KMT2CQ8NEZ4 4911 aaKnown RBP1.96□□□□□ -2.1
PCDH18-201ENST00000344876 MT1MQ8N339 61 aa1.96□□□□□ -2.1
PCDH18-201ENST00000344876 FSIP2Q5CZC0 6907 aa1.95□□□□□ -2.1
PCDH18-201ENST00000344876 HERC2O95714 4834 aa1.95□□□□□ -2.1
PCDH18-201ENST00000344876 SYNE2Q8WXH0 6885 aaKnown RBP1.94□□□□□ -2.1
PCDH18-201ENST00000344876 HSPG2P98160 4391 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms