RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
TRIOBP-202ENST00000344404 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
TRIOBP-202ENST00000344404 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
TRIOBP-202ENST00000344404 FRAS1Q86XX4 4008 aa5.34□□□□□ -1.55
TRIOBP-202ENST00000344404 KMT2AQ03164 3969 aa5.26□□□□□ -1.57
TRIOBP-202ENST00000344404 KRTAP3-3Q9BYR6 98 aa5.21□□□□□ -1.58
TRIOBP-202ENST00000344404 DNAH9Q9NYC9 4486 aa5.18□□□□□ -1.58
TRIOBP-202ENST00000344404 ANK2Q01484 3957 aa5.16□□□□□ -1.58
TRIOBP-202ENST00000344404 KRTAP3-2Q9BYR7 98 aa5.16□□□□□ -1.58
TRIOBP-202ENST00000344404 DNAH1Q9P2D7 4330 aa5.14□□□□□ -1.59
TRIOBP-202ENST00000344404 LYSTQ99698 3801 aa5.14□□□□□ -1.59
TRIOBP-202ENST00000344404 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
TRIOBP-202ENST00000344404 CMYA5Q8N3K9 4069 aa5.12□□□□□ -1.59
TRIOBP-202ENST00000344404 DNAH2Q9P225 4427 aa5.11□□□□□ -1.59
TRIOBP-202ENST00000344404 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
TRIOBP-202ENST00000344404 DNAH10Q8IVF4 4471 aa5.09□□□□□ -1.59
TRIOBP-202ENST00000344404 DNAH3Q8TD57 4116 aa5.09□□□□□ -1.6
TRIOBP-202ENST00000344404 KRTAP10-4P60372 401 aaPredicted RBP5.08□□□□□ -1.6
TRIOBP-202ENST00000344404 MT1HP80294 61 aa5□□□□□ -1.61
TRIOBP-202ENST00000344404 DNAH7Q8WXX0 4024 aa4.97□□□□□ -1.61
TRIOBP-202ENST00000344404 FAT2Q9NYQ8 4349 aa4.97□□□□□ -1.61
TRIOBP-202ENST00000344404 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
TRIOBP-202ENST00000344404 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.61
TRIOBP-202ENST00000344404 PRKDCP78527 4128 aaKnown RBP4.91□□□□□ -1.62
TRIOBP-202ENST00000344404 DNAH6Q9C0G6 4158 aa4.9□□□□□ -1.62
TRIOBP-202ENST00000344404 SPRR2EP22531 72 aa4.9□□□□□ -1.63
TRIOBP-202ENST00000344404 SPRR2BP35325 72 aa4.9□□□□□ -1.63
TRIOBP-202ENST00000344404 SPRR2AP35326 72 aa4.9□□□□□ -1.63
TRIOBP-202ENST00000344404 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
TRIOBP-202ENST00000344404 DNAH11Q96DT5 4516 aa4.79□□□□□ -1.64
TRIOBP-202ENST00000344404 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
TRIOBP-202ENST00000344404 PLECQ15149 4684 aaKnown RBP4.78□□□□□ -1.64
TRIOBP-202ENST00000344404 MT2AP02795 61 aa4.77□□□□□ -1.65
TRIOBP-202ENST00000344404 STARD9Q9P2P6 4700 aa4.77□□□□□ -1.65
TRIOBP-202ENST00000344404 DNAH17Q9UFH2 4485 aa4.76□□□□□ -1.65
TRIOBP-202ENST00000344404 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
TRIOBP-202ENST00000344404 MT1FP04733 61 aa4.73□□□□□ -1.65
TRIOBP-202ENST00000344404 SPRR2DP22532 72 aa4.7□□□□□ -1.66
TRIOBP-202ENST00000344404 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
TRIOBP-202ENST00000344404 VPS13DQ5THJ4 4388 aa4.69□□□□□ -1.66
TRIOBP-202ENST00000344404 DNAH5Q8TE73 4624 aa4.68□□□□□ -1.66
TRIOBP-202ENST00000344404 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
TRIOBP-202ENST00000344404 LRP1BQ9NZR2 4599 aa4.66□□□□□ -1.66
TRIOBP-202ENST00000344404 HECTD4Q9Y4D8 3996 aa4.65□□□□□ -1.67
TRIOBP-202ENST00000344404 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
TRIOBP-202ENST00000344404 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
TRIOBP-202ENST00000344404 LCE2BO14633 110 aa4.57□□□□□ -1.68
TRIOBP-202ENST00000344404 LPAP08519 4548 aa4.52□□□□□ -1.69
TRIOBP-202ENST00000344404 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
TRIOBP-202ENST00000344404 FAT1Q14517 4588 aa4.51□□□□□ -1.69
TRIOBP-202ENST00000344404 MT1GP13640 62 aa4.49□□□□□ -1.69
TRIOBP-202ENST00000344404 SACSQ9NZJ4 4579 aa4.46□□□□□ -1.7
TRIOBP-202ENST00000344404 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
TRIOBP-202ENST00000344404 FAT3Q8TDW7 4589 aa4.44□□□□□ -1.7
TRIOBP-202ENST00000344404 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
TRIOBP-202ENST00000344404 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
TRIOBP-202ENST00000344404 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
TRIOBP-202ENST00000344404 PKD1P98161 4303 aa4.4□□□□□ -1.71
TRIOBP-202ENST00000344404 HSPG2P98160 4391 aa4.39□□□□□ -1.71
TRIOBP-202ENST00000344404 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
TRIOBP-202ENST00000344404 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
TRIOBP-202ENST00000344404 MT4P47944 62 aa4.38□□□□□ -1.71
TRIOBP-202ENST00000344404 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
TRIOBP-202ENST00000344404 DYNC1H1Q14204 4646 aaKnown RBP4.34□□□□□ -1.72
TRIOBP-202ENST00000344404 APOBP04114 4563 aaKnown RBP4.34□□□□□ -1.72
TRIOBP-202ENST00000344404 LCE2DQ5TA82 110 aaPredicted RBP4.33□□□□□ -1.72
TRIOBP-202ENST00000344404 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
TRIOBP-202ENST00000344404 DNHD1Q96M86 4753 aa4.32□□□□□ -1.72
TRIOBP-202ENST00000344404 TNXBP22105 4242 aa4.27□□□□□ -1.73
TRIOBP-202ENST00000344404 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
TRIOBP-202ENST00000344404 LRP1Q07954 4544 aaKnown RBP4.23□□□□□ -1.73
TRIOBP-202ENST00000344404 KRTAP9-2Q9BYQ4 174 aa4.22□□□□□ -1.73
TRIOBP-202ENST00000344404 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
TRIOBP-202ENST00000344404 MT1XP80297 61 aa4.19□□□□□ -1.74
TRIOBP-202ENST00000344404 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
TRIOBP-202ENST00000344404 RYR1P21817 5038 aa4.17□□□□□ -1.74
TRIOBP-202ENST00000344404 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
TRIOBP-202ENST00000344404 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
TRIOBP-202ENST00000344404 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
TRIOBP-202ENST00000344404 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
TRIOBP-202ENST00000344404 MT1BP07438 61 aa4.08□□□□□ -1.76
TRIOBP-202ENST00000344404 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
TRIOBP-202ENST00000344404 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
TRIOBP-202ENST00000344404 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
TRIOBP-202ENST00000344404 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
TRIOBP-202ENST00000344404 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
TRIOBP-202ENST00000344404 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
TRIOBP-202ENST00000344404 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
TRIOBP-202ENST00000344404 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
TRIOBP-202ENST00000344404 PRM1P04553 51 aa3.91□□□□□ -1.78
TRIOBP-202ENST00000344404 RYR3Q15413 4870 aa3.91□□□□□ -1.78
TRIOBP-202ENST00000344404 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
TRIOBP-202ENST00000344404 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
TRIOBP-202ENST00000344404 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
TRIOBP-202ENST00000344404 HYDINQ4G0P3 5121 aa3.86□□□□□ -1.79
TRIOBP-202ENST00000344404 LRP2P98164 4655 aa3.85□□□□□ -1.79
TRIOBP-202ENST00000344404 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
TRIOBP-202ENST00000344404 MT3P25713 68 aa3.8□□□□□ -1.8
TRIOBP-202ENST00000344404 MT1LQ93083 61 aa3.8□□□□□ -1.8
TRIOBP-202ENST00000344404 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms