RNA–Protein interactions for RNA: ENST00000343638.9

UBTF-202, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 4,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-202ENST00000343638 TNP1P09430 55 aa9.16□□□□□ -0.94
UBTF-202ENST00000343638 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
UBTF-202ENST00000343638 FAT1Q14517 4588 aa9.13□□□□□ -0.95
UBTF-202ENST00000343638 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
UBTF-202ENST00000343638 C10orf95Q9H7T3 257 aa9.05□□□□□ -0.96
UBTF-202ENST00000343638 DYNC2H1Q8NCM8 4307 aaKnown RBP9.05□□□□□ -0.96
UBTF-202ENST00000343638 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
UBTF-202ENST00000343638 KRTAP12-2P59991 146 aa8.98□□□□□ -0.97
UBTF-202ENST00000343638 DNAH8Q96JB1 4490 aa8.95□□□□□ -0.98
UBTF-202ENST00000343638 KRTAP13-4Q3LI77 160 aa8.94□□□□□ -0.98
UBTF-202ENST00000343638 KRTAP12-1P59990 96 aa8.93□□□□□ -0.98
UBTF-202ENST00000343638 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
UBTF-202ENST00000343638 FAT2Q9NYQ8 4349 aa8.91□□□□□ -0.98
UBTF-202ENST00000343638 LYSTQ99698 3801 aa8.88□□□□□ -0.99
UBTF-202ENST00000343638 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
UBTF-202ENST00000343638 RYR1P21817 5038 aa8.85□□□□□ -0.99
UBTF-202ENST00000343638 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
UBTF-202ENST00000343638 SACSQ9NZJ4 4579 aa8.8□□□□□ -1
UBTF-202ENST00000343638 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
UBTF-202ENST00000343638 DNAH7Q8WXX0 4024 aa8.79□□□□□ -1
UBTF-202ENST00000343638 RYR3Q15413 4870 aa8.72□□□□□ -1.01
UBTF-202ENST00000343638 PRO2289Q9P1D8 64 aa8.72□□□□□ -1.01
UBTF-202ENST00000343638 DNAH6Q9C0G6 4158 aa8.72□□□□□ -1.01
UBTF-202ENST00000343638 HECTD4Q9Y4D8 3996 aa8.71□□□□□ -1.02
UBTF-202ENST00000343638 KRTAP17-1Q9BYP8 105 aa8.66□□□□□ -1.02
UBTF-202ENST00000343638 HYDINQ4G0P3 5121 aa8.65□□□□□ -1.02
UBTF-202ENST00000343638 H3BS24 57 aa8.65□□□□□ -1.03
UBTF-202ENST00000343638 APOBP04114 4563 aaKnown RBP8.65□□□□□ -1.03
UBTF-202ENST00000343638 RYR2Q92736 4967 aa8.64□□□□□ -1.03
UBTF-202ENST00000343638 A0A0A0MQY5 61 aa8.6□□□□□ -1.03
UBTF-202ENST00000343638 NDUFAF8A1L188 74 aa8.6□□□□□ -1.03
UBTF-202ENST00000343638 FRAS1Q86XX4 4008 aa8.58□□□□□ -1.04
UBTF-202ENST00000343638 KRTAP4-1Q9BYQ7 146 aa8.56□□□□□ -1.04
UBTF-202ENST00000343638 MYCBP2O75592 4640 aa8.53□□□□□ -1.04
UBTF-202ENST00000343638 LRP1Q07954 4544 aaKnown RBP8.53□□□□□ -1.04
UBTF-202ENST00000343638 PKHD1P08F94 4074 aa8.49□□□□□ -1.05
UBTF-202ENST00000343638 LORP23490 312 aaPredicted RBP8.42□□□□□ -1.06
UBTF-202ENST00000343638 KMT2CQ8NEZ4 4911 aaKnown RBP8.37□□□□□ -1.07
UBTF-202ENST00000343638 FAT3Q8TDW7 4589 aa8.32□□□□□ -1.08
UBTF-202ENST00000343638 PKD1P98161 4303 aa8.32□□□□□ -1.08
UBTF-202ENST00000343638 HSPG2P98160 4391 aa8.27□□□□□ -1.09
UBTF-202ENST00000343638 HERC2O95714 4834 aa8.26□□□□□ -1.09
UBTF-202ENST00000343638 MT1HP80294 61 aa8.15□□□□□ -1.1
UBTF-202ENST00000343638 BIRC6Q9NR09 4857 aa8.11□□□□□ -1.11
UBTF-202ENST00000343638 LRP2P98164 4655 aa8.08□□□□□ -1.12
UBTF-202ENST00000343638 MT2AP02795 61 aa8□□□□□ -1.13
UBTF-202ENST00000343638 KRTAP10-12P60413 245 aa7.98□□□□□ -1.13
UBTF-202ENST00000343638 SPRR2GQ9BYE4 73 aa7.93□□□□□ -1.14
UBTF-202ENST00000343638 EPPK1P58107 5090 aaKnown RBP7.93□□□□□ -1.14
UBTF-202ENST00000343638 KRTAP15-1Q3LI76 137 aa7.91□□□□□ -1.14
UBTF-202ENST00000343638 KRTAP23-1A1A580 65 aa7.88□□□□□ -1.15
UBTF-202ENST00000343638 MT1FP04733 61 aa7.88□□□□□ -1.15
UBTF-202ENST00000343638 LCE3AQ5TA76 89 aa7.81□□□□□ -1.16
UBTF-202ENST00000343638 TNXBP22105 4242 aa7.8□□□□□ -1.16
UBTF-202ENST00000343638 PKHD1L1Q86WI1 4243 aa7.78□□□□□ -1.16
UBTF-202ENST00000343638 ABCA13Q86UQ4 5058 aa7.77□□□□□ -1.17
UBTF-202ENST00000343638 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
UBTF-202ENST00000343638 LPAP08519 4548 aa7.76□□□□□ -1.17
UBTF-202ENST00000343638 HERC1Q15751 4861 aa7.74□□□□□ -1.17
UBTF-202ENST00000343638 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
UBTF-202ENST00000343638 PCLOQ9Y6V0 5065 aa7.66□□□□□ -1.18
UBTF-202ENST00000343638 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
UBTF-202ENST00000343638 KRTAP19-2Q3LHN2 52 aa7.57□□□□□ -1.2
UBTF-202ENST00000343638 KRTAP9-8Q9BYQ0 159 aa7.54□□□□□ -1.2
UBTF-202ENST00000343638 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.21
UBTF-202ENST00000343638 KRTAP8-1Q8IUC2 63 aa7.38□□□□□ -1.23
UBTF-202ENST00000343638 MUC17Q685J3 4493 aa7.36□□□□□ -1.23
UBTF-202ENST00000343638 MT1BP07438 61 aa7.34□□□□□ -1.23
UBTF-202ENST00000343638 FLGP20930 4061 aaPredicted RBP7.31□□□□□ -1.24
UBTF-202ENST00000343638 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
UBTF-202ENST00000343638 MT1XP80297 61 aa7.27□□□□□ -1.25
UBTF-202ENST00000343638 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
UBTF-202ENST00000343638 KRTAP10-5P60370 271 aa7.21□□□□□ -1.25
UBTF-202ENST00000343638 KRTAP10-7P60409 375 aaPredicted RBP7.21□□□□□ -1.26
UBTF-202ENST00000343638 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
UBTF-202ENST00000343638 KRTAP19-5Q3LI72 72 aa7.18□□□□□ -1.26
UBTF-202ENST00000343638 HMCN2Q8NDA2 5059 aa7.15□□□□□ -1.26
UBTF-202ENST00000343638 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
UBTF-202ENST00000343638 MUC2Q02817 5179 aa7.06□□□□□ -1.28
UBTF-202ENST00000343638 LCE2BO14633 110 aa7.03□□□□□ -1.28
UBTF-202ENST00000343638 UBR4Q5T4S7 5183 aa7.03□□□□□ -1.28
UBTF-202ENST00000343638 INE1O15225 51 aa6.96□□□□□ -1.3
UBTF-202ENST00000343638 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
UBTF-202ENST00000343638 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
UBTF-202ENST00000343638 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
UBTF-202ENST00000343638 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
UBTF-202ENST00000343638 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
UBTF-202ENST00000343638 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
UBTF-202ENST00000343638 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
UBTF-202ENST00000343638 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.34
UBTF-202ENST00000343638 KRTAP19-6Q3LI70 58 aa6.59□□□□□ -1.35
UBTF-202ENST00000343638 MT1GP13640 62 aa6.53□□□□□ -1.36
UBTF-202ENST00000343638 SPRR2EP22531 72 aa6.47□□□□□ -1.37
UBTF-202ENST00000343638 SPRR2BP35325 72 aa6.47□□□□□ -1.37
UBTF-202ENST00000343638 SPRR2AP35326 72 aa6.47□□□□□ -1.37
UBTF-202ENST00000343638 MT1EP04732 61 aa6.46□□□□□ -1.38
UBTF-202ENST00000343638 MT1LQ93083 61 aa6.44□□□□□ -1.38
UBTF-202ENST00000343638 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
UBTF-202ENST00000343638 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
UBTF-202ENST00000343638 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms