RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 DNAH1Q9P2D7 4330 aa6.09□□□□□ -1.43
SSX2IP-201ENST00000342203 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
SSX2IP-201ENST00000342203 STARD9Q9P2P6 4700 aa6.08□□□□□ -1.44
SSX2IP-201ENST00000342203 DNAH3Q8TD57 4116 aa6.04□□□□□ -1.44
SSX2IP-201ENST00000342203 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
SSX2IP-201ENST00000342203 DNAH11Q96DT5 4516 aa5.96□□□□□ -1.45
SSX2IP-201ENST00000342203 DNAH2Q9P225 4427 aa5.94□□□□□ -1.46
SSX2IP-201ENST00000342203 DNAH17Q9UFH2 4485 aa5.93□□□□□ -1.46
SSX2IP-201ENST00000342203 VPS13DQ5THJ4 4388 aa5.93□□□□□ -1.46
SSX2IP-201ENST00000342203 DNAH8Q96JB1 4490 aa5.92□□□□□ -1.46
SSX2IP-201ENST00000342203 HECTD4Q9Y4D8 3996 aa5.88□□□□□ -1.47
SSX2IP-201ENST00000342203 HYDINQ4G0P3 5121 aa5.86□□□□□ -1.47
SSX2IP-201ENST00000342203 LRP1BQ9NZR2 4599 aa5.82□□□□□ -1.48
SSX2IP-201ENST00000342203 FAT2Q9NYQ8 4349 aa5.81□□□□□ -1.48
SSX2IP-201ENST00000342203 DNAH5Q8TE73 4624 aa5.78□□□□□ -1.48
SSX2IP-201ENST00000342203 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
SSX2IP-201ENST00000342203 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
SSX2IP-201ENST00000342203 FAT1Q14517 4588 aa5.75□□□□□ -1.49
SSX2IP-201ENST00000342203 ALMS1Q8TCU4 4167 aa5.73□□□□□ -1.49
SSX2IP-201ENST00000342203 LORP23490 312 aaPredicted RBP5.7□□□□□ -1.5
SSX2IP-201ENST00000342203 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
SSX2IP-201ENST00000342203 VPS13BQ7Z7G8 4022 aa5.69□□□□□ -1.5
SSX2IP-201ENST00000342203 MYCBP2O75592 4640 aa5.69□□□□□ -1.5
SSX2IP-201ENST00000342203 MT1HL1P0DM35 61 aa5.67□□□□□ -1.5
SSX2IP-201ENST00000342203 DYNC2H1Q8NCM8 4307 aaKnown RBP5.65□□□□□ -1.5
SSX2IP-201ENST00000342203 KRTAP21-3Q3LHN1 58 aa5.62□□□□□ -1.51
SSX2IP-201ENST00000342203 KMT2CQ8NEZ4 4911 aaKnown RBP5.53□□□□□ -1.52
SSX2IP-201ENST00000342203 PKD1P98161 4303 aa5.53□□□□□ -1.52
SSX2IP-201ENST00000342203 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
SSX2IP-201ENST00000342203 DYNC1H1Q14204 4646 aaKnown RBP5.52□□□□□ -1.53
SSX2IP-201ENST00000342203 APOBP04114 4563 aaKnown RBP5.49□□□□□ -1.53
SSX2IP-201ENST00000342203 FAT3Q8TDW7 4589 aa5.47□□□□□ -1.53
SSX2IP-201ENST00000342203 SACSQ9NZJ4 4579 aa5.45□□□□□ -1.54
SSX2IP-201ENST00000342203 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
SSX2IP-201ENST00000342203 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
SSX2IP-201ENST00000342203 RYR1P21817 5038 aa5.36□□□□□ -1.55
SSX2IP-201ENST00000342203 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
SSX2IP-201ENST00000342203 HSPG2P98160 4391 aa5.33□□□□□ -1.56
SSX2IP-201ENST00000342203 KIAA1109Q2LD37 5005 aa5.32□□□□□ -1.56
SSX2IP-201ENST00000342203 INE1O15225 51 aa5.32□□□□□ -1.56
SSX2IP-201ENST00000342203 LPAP08519 4548 aa5.31□□□□□ -1.56
SSX2IP-201ENST00000342203 KRTAP4-1Q9BYQ7 146 aa5.3□□□□□ -1.56
SSX2IP-201ENST00000342203 RYR3Q15413 4870 aa5.25□□□□□ -1.57
SSX2IP-201ENST00000342203 PKHD1L1Q86WI1 4243 aa5.23□□□□□ -1.57
SSX2IP-201ENST00000342203 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
SSX2IP-201ENST00000342203 LRP2P98164 4655 aa5.22□□□□□ -1.57
SSX2IP-201ENST00000342203 KRTAP10-12P60413 245 aa5.21□□□□□ -1.58
SSX2IP-201ENST00000342203 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
SSX2IP-201ENST00000342203 RYR2Q92736 4967 aa5.2□□□□□ -1.58
SSX2IP-201ENST00000342203 EPPK1P58107 5090 aaKnown RBP5.15□□□□□ -1.58
SSX2IP-201ENST00000342203 ABCA13Q86UQ4 5058 aa5.15□□□□□ -1.59
SSX2IP-201ENST00000342203 MUC2Q02817 5179 aa5.14□□□□□ -1.59
SSX2IP-201ENST00000342203 KRTAP17-1Q9BYP8 105 aa5.14□□□□□ -1.59
SSX2IP-201ENST00000342203 TNXBP22105 4242 aa5.03□□□□□ -1.6
SSX2IP-201ENST00000342203 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
SSX2IP-201ENST00000342203 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
SSX2IP-201ENST00000342203 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
SSX2IP-201ENST00000342203 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
SSX2IP-201ENST00000342203 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
SSX2IP-201ENST00000342203 MT2AP02795 61 aa4.85□□□□□ -1.63
SSX2IP-201ENST00000342203 MT1FP04733 61 aa4.84□□□□□ -1.64
SSX2IP-201ENST00000342203 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
SSX2IP-201ENST00000342203 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
SSX2IP-201ENST00000342203 HERC1Q15751 4861 aa4.81□□□□□ -1.64
SSX2IP-201ENST00000342203 MT1HP80294 61 aa4.8□□□□□ -1.64
SSX2IP-201ENST00000342203 HERC2O95714 4834 aa4.79□□□□□ -1.64
SSX2IP-201ENST00000342203 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
SSX2IP-201ENST00000342203 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
SSX2IP-201ENST00000342203 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
SSX2IP-201ENST00000342203 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
SSX2IP-201ENST00000342203 PCLOQ9Y6V0 5065 aa4.66□□□□□ -1.66
SSX2IP-201ENST00000342203 MT1XP80297 61 aa4.61□□□□□ -1.67
SSX2IP-201ENST00000342203 UBR4Q5T4S7 5183 aa4.61□□□□□ -1.67
SSX2IP-201ENST00000342203 MUC17Q685J3 4493 aa4.59□□□□□ -1.68
SSX2IP-201ENST00000342203 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
SSX2IP-201ENST00000342203 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
SSX2IP-201ENST00000342203 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
SSX2IP-201ENST00000342203 MT1BP07438 61 aa4.55□□□□□ -1.68
SSX2IP-201ENST00000342203 LCE2CQ5TA81 110 aa4.52□□□□□ -1.69
SSX2IP-201ENST00000342203 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
SSX2IP-201ENST00000342203 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
SSX2IP-201ENST00000342203 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
SSX2IP-201ENST00000342203 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
SSX2IP-201ENST00000342203 FLGP20930 4061 aaPredicted RBP4.43□□□□□ -1.7
SSX2IP-201ENST00000342203 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.7
SSX2IP-201ENST00000342203 USH2AO75445 5202 aa4.38□□□□□ -1.71
SSX2IP-201ENST00000342203 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
SSX2IP-201ENST00000342203 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
SSX2IP-201ENST00000342203 BIRC6Q9NR09 4857 aa4.31□□□□□ -1.72
SSX2IP-201ENST00000342203 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
SSX2IP-201ENST00000342203 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
SSX2IP-201ENST00000342203 KMT2DO14686 5537 aa4.27□□□□□ -1.73
SSX2IP-201ENST00000342203 MT1GP13640 62 aa4.26□□□□□ -1.73
SSX2IP-201ENST00000342203 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
SSX2IP-201ENST00000342203 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
SSX2IP-201ENST00000342203 LCE2BO14633 110 aa4.16□□□□□ -1.74
SSX2IP-201ENST00000342203 MT1LQ93083 61 aa4.1□□□□□ -1.75
SSX2IP-201ENST00000342203 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
SSX2IP-201ENST00000342203 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
SSX2IP-201ENST00000342203 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 251.7 ms