RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 FRAS1Q86XX4 4008 aa6.46□□□□□ -1.38
PDPK1-202ENST00000342085 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.38
PDPK1-202ENST00000342085 DNAH9Q9NYC9 4486 aa6.46□□□□□ -1.38
PDPK1-202ENST00000342085 CMYA5Q8N3K9 4069 aa6.43□□□□□ -1.38
PDPK1-202ENST00000342085 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
PDPK1-202ENST00000342085 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
PDPK1-202ENST00000342085 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
PDPK1-202ENST00000342085 INE1O15225 51 aa6.34□□□□□ -1.39
PDPK1-202ENST00000342085 DNAH7Q8WXX0 4024 aa6.29□□□□□ -1.4
PDPK1-202ENST00000342085 DNAH1Q9P2D7 4330 aa6.26□□□□□ -1.41
PDPK1-202ENST00000342085 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
PDPK1-202ENST00000342085 VPS13BQ7Z7G8 4022 aa6.25□□□□□ -1.41
PDPK1-202ENST00000342085 PLECQ15149 4684 aaKnown RBP6.22□□□□□ -1.41
PDPK1-202ENST00000342085 DNHD1Q96M86 4753 aa6.2□□□□□ -1.42
PDPK1-202ENST00000342085 STARD9Q9P2P6 4700 aa6.17□□□□□ -1.42
PDPK1-202ENST00000342085 ALMS1Q8TCU4 4167 aa6.15□□□□□ -1.42
PDPK1-202ENST00000342085 DNAH6Q9C0G6 4158 aa6.1□□□□□ -1.43
PDPK1-202ENST00000342085 DNAH11Q96DT5 4516 aa6.06□□□□□ -1.44
PDPK1-202ENST00000342085 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
PDPK1-202ENST00000342085 VPS13DQ5THJ4 4388 aa6.03□□□□□ -1.44
PDPK1-202ENST00000342085 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.44
PDPK1-202ENST00000342085 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
PDPK1-202ENST00000342085 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
PDPK1-202ENST00000342085 DNAH3Q8TD57 4116 aa5.98□□□□□ -1.45
PDPK1-202ENST00000342085 DNAH2Q9P225 4427 aa5.97□□□□□ -1.45
PDPK1-202ENST00000342085 FAT1Q14517 4588 aa5.95□□□□□ -1.46
PDPK1-202ENST00000342085 DNAH5Q8TE73 4624 aa5.95□□□□□ -1.46
PDPK1-202ENST00000342085 DNAH8Q96JB1 4490 aa5.93□□□□□ -1.46
PDPK1-202ENST00000342085 FAT2Q9NYQ8 4349 aa5.91□□□□□ -1.46
PDPK1-202ENST00000342085 LRP1BQ9NZR2 4599 aa5.89□□□□□ -1.47
PDPK1-202ENST00000342085 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
PDPK1-202ENST00000342085 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
PDPK1-202ENST00000342085 KRTAP10-4P60372 401 aaPredicted RBP5.86□□□□□ -1.47
PDPK1-202ENST00000342085 DNAH17Q9UFH2 4485 aa5.84□□□□□ -1.47
PDPK1-202ENST00000342085 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
PDPK1-202ENST00000342085 HECTD4Q9Y4D8 3996 aa5.8□□□□□ -1.48
PDPK1-202ENST00000342085 SPRR2EP22531 72 aa5.79□□□□□ -1.48
PDPK1-202ENST00000342085 SPRR2BP35325 72 aa5.79□□□□□ -1.48
PDPK1-202ENST00000342085 SPRR2AP35326 72 aa5.79□□□□□ -1.48
PDPK1-202ENST00000342085 MT1HP80294 61 aa5.78□□□□□ -1.48
PDPK1-202ENST00000342085 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.49
PDPK1-202ENST00000342085 SACSQ9NZJ4 4579 aa5.69□□□□□ -1.5
PDPK1-202ENST00000342085 LPAP08519 4548 aa5.69□□□□□ -1.5
PDPK1-202ENST00000342085 KRTAP17-1Q9BYP8 105 aa5.67□□□□□ -1.5
PDPK1-202ENST00000342085 KRTAP4-1Q9BYQ7 146 aa5.66□□□□□ -1.5
PDPK1-202ENST00000342085 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
PDPK1-202ENST00000342085 LRP1Q07954 4544 aaKnown RBP5.65□□□□□ -1.51
PDPK1-202ENST00000342085 MT2AP02795 61 aa5.62□□□□□ -1.51
PDPK1-202ENST00000342085 DYNC1H1Q14204 4646 aaKnown RBP5.61□□□□□ -1.51
PDPK1-202ENST00000342085 SPRR2DP22532 72 aa5.61□□□□□ -1.51
PDPK1-202ENST00000342085 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
PDPK1-202ENST00000342085 RYR1P21817 5038 aa5.59□□□□□ -1.51
PDPK1-202ENST00000342085 HYDINQ4G0P3 5121 aa5.56□□□□□ -1.52
PDPK1-202ENST00000342085 HSPG2P98160 4391 aa5.54□□□□□ -1.52
PDPK1-202ENST00000342085 MT1FP04733 61 aa5.48□□□□□ -1.53
PDPK1-202ENST00000342085 LCE2BO14633 110 aa5.46□□□□□ -1.53
PDPK1-202ENST00000342085 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
PDPK1-202ENST00000342085 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
PDPK1-202ENST00000342085 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
PDPK1-202ENST00000342085 SPRR2GQ9BYE4 73 aa5.41□□□□□ -1.54
PDPK1-202ENST00000342085 RYR3Q15413 4870 aa5.4□□□□□ -1.54
PDPK1-202ENST00000342085 APOBP04114 4563 aaKnown RBP5.4□□□□□ -1.54
PDPK1-202ENST00000342085 PKD1P98161 4303 aa5.27□□□□□ -1.57
PDPK1-202ENST00000342085 KMT2CQ8NEZ4 4911 aaKnown RBP5.26□□□□□ -1.57
PDPK1-202ENST00000342085 LRP2P98164 4655 aa5.25□□□□□ -1.57
PDPK1-202ENST00000342085 MT1GP13640 62 aa5.24□□□□□ -1.57
PDPK1-202ENST00000342085 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
PDPK1-202ENST00000342085 PKHD1L1Q86WI1 4243 aa5.22□□□□□ -1.57
PDPK1-202ENST00000342085 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
PDPK1-202ENST00000342085 LCE2DQ5TA82 110 aaPredicted RBP5.18□□□□□ -1.58
PDPK1-202ENST00000342085 TNXBP22105 4242 aa5.16□□□□□ -1.58
PDPK1-202ENST00000342085 KIAA1109Q2LD37 5005 aa5.13□□□□□ -1.59
PDPK1-202ENST00000342085 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
PDPK1-202ENST00000342085 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
PDPK1-202ENST00000342085 MT4P47944 62 aa5.05□□□□□ -1.6
PDPK1-202ENST00000342085 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
PDPK1-202ENST00000342085 HERC2O95714 4834 aa5□□□□□ -1.61
PDPK1-202ENST00000342085 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
PDPK1-202ENST00000342085 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
PDPK1-202ENST00000342085 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
PDPK1-202ENST00000342085 RYR2Q92736 4967 aa4.91□□□□□ -1.62
PDPK1-202ENST00000342085 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.63
PDPK1-202ENST00000342085 EPPK1P58107 5090 aaKnown RBP4.88□□□□□ -1.63
PDPK1-202ENST00000342085 MT1XP80297 61 aa4.87□□□□□ -1.63
PDPK1-202ENST00000342085 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
PDPK1-202ENST00000342085 LCE1BQ5T7P3 118 aa4.86□□□□□ -1.63
PDPK1-202ENST00000342085 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
PDPK1-202ENST00000342085 KRTAP9-2Q9BYQ4 174 aa4.77□□□□□ -1.65
PDPK1-202ENST00000342085 MT1BP07438 61 aa4.75□□□□□ -1.65
PDPK1-202ENST00000342085 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
PDPK1-202ENST00000342085 KRTAP9-8Q9BYQ0 159 aa4.73□□□□□ -1.65
PDPK1-202ENST00000342085 MUC2Q02817 5179 aa4.69□□□□□ -1.66
PDPK1-202ENST00000342085 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
PDPK1-202ENST00000342085 MT3P25713 68 aa4.65□□□□□ -1.67
PDPK1-202ENST00000342085 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
PDPK1-202ENST00000342085 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
PDPK1-202ENST00000342085 BIRC6Q9NR09 4857 aa4.63□□□□□ -1.67
PDPK1-202ENST00000342085 HERC1Q15751 4861 aa4.63□□□□□ -1.67
PDPK1-202ENST00000342085 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
PDPK1-202ENST00000342085 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms