RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
NECTIN1-202ENST00000340882 K7EQZ3 153 aa6.9□□□□□ -1.3
NECTIN1-202ENST00000340882 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.3
NECTIN1-202ENST00000340882 H3BT86 120 aa6.89□□□□□ -1.31
NECTIN1-202ENST00000340882 MT1XP80297 61 aa6.89□□□□□ -1.31
NECTIN1-202ENST00000340882 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
NECTIN1-202ENST00000340882 A0A1B0GW54 56 aa6.85□□□□□ -1.31
NECTIN1-202ENST00000340882 LOC110117498A0A087WWA1 95 aa6.84□□□□□ -1.31
NECTIN1-202ENST00000340882 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
NECTIN1-202ENST00000340882 NREPQ16612 68 aa6.84□□□□□ -1.31
NECTIN1-202ENST00000340882 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
NECTIN1-202ENST00000340882 C1orf64Q8NEQ6 169 aa6.83□□□□□ -1.32
NECTIN1-202ENST00000340882 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
NECTIN1-202ENST00000340882 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
NECTIN1-202ENST00000340882 HCG22E2RYF7 251 aa6.79□□□□□ -1.32
NECTIN1-202ENST00000340882 C14orf132Q9NPU4 83 aa6.79□□□□□ -1.32
NECTIN1-202ENST00000340882 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
NECTIN1-202ENST00000340882 KRTAP12-2P59991 146 aa6.78□□□□□ -1.32
NECTIN1-202ENST00000340882 JMJD7-PLA2G4BH0Y9G9 81 aa6.77□□□□□ -1.33
NECTIN1-202ENST00000340882 ACYP1P07311 99 aa6.76□□□□□ -1.33
NECTIN1-202ENST00000340882 PDE6GP18545 87 aa6.73□□□□□ -1.33
NECTIN1-202ENST00000340882 A0A087WVE0 104 aa6.72□□□□□ -1.33
NECTIN1-202ENST00000340882 CASC2Q6XLA1 102 aa6.71□□□□□ -1.34
NECTIN1-202ENST00000340882 Q8N9L7 120 aa6.71□□□□□ -1.34
NECTIN1-202ENST00000340882 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
NECTIN1-202ENST00000340882 CXCL6P80162 114 aa6.69□□□□□ -1.34
NECTIN1-202ENST00000340882 DSTQ03001 7570 aaKnown RBP6.66□□□□□ -1.34
NECTIN1-202ENST00000340882 KRTAP4-9Q9BYQ8 210 aa6.66□□□□□ -1.34
NECTIN1-202ENST00000340882 BPY2O14599 106 aa6.65□□□□□ -1.34
NECTIN1-202ENST00000340882 LINC00643Q86TS7 51 aa6.63□□□□□ -1.35
NECTIN1-202ENST00000340882 ANAPC13Q9BS18 74 aa6.61□□□□□ -1.35
NECTIN1-202ENST00000340882 A8MUN3 132 aa6.6□□□□□ -1.35
NECTIN1-202ENST00000340882 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
NECTIN1-202ENST00000340882 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
NECTIN1-202ENST00000340882 ATP5EP2Q5VTU8 51 aa6.55□□□□□ -1.36
NECTIN1-202ENST00000340882 H0YAA0 97 aa6.54□□□□□ -1.36
NECTIN1-202ENST00000340882 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
NECTIN1-202ENST00000340882 ADM2Q7Z4H4 148 aa6.51□□□□□ -1.37
NECTIN1-202ENST00000340882 ATOX1O00244 68 aa6.48□□□□□ -1.37
NECTIN1-202ENST00000340882 HIST1H4AP62805 103 aaKnown RBP6.45□□□□□ -1.38
NECTIN1-202ENST00000340882 UBL5Q9BZL1 73 aa6.45□□□□□ -1.38
NECTIN1-202ENST00000340882 UQCRQO14949 82 aa6.44□□□□□ -1.38
NECTIN1-202ENST00000340882 CYP4F30PQ9H0H9 118 aa6.43□□□□□ -1.38
NECTIN1-202ENST00000340882 NDUFC1O43677 76 aa6.41□□□□□ -1.38
NECTIN1-202ENST00000340882 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
NECTIN1-202ENST00000340882 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
NECTIN1-202ENST00000340882 COX7CP15954 63 aa6.39□□□□□ -1.39
NECTIN1-202ENST00000340882 SMIM20Q8N5G0 67 aa6.36□□□□□ -1.39
NECTIN1-202ENST00000340882 SERP2Q8N6R1 65 aa6.36□□□□□ -1.39
NECTIN1-202ENST00000340882 TP53AIP1Q9HCN2 124 aa6.36□□□□□ -1.39
NECTIN1-202ENST00000340882 HMCN1Q96RW7 5635 aa6.35□□□□□ -1.39
NECTIN1-202ENST00000340882 R4GN34 69 aa6.35□□□□□ -1.39
NECTIN1-202ENST00000340882 P0C880 135 aa6.33□□□□□ -1.4
NECTIN1-202ENST00000340882 AHNAK2Q8IVF2 5795 aa6.33□□□□□ -1.4
NECTIN1-202ENST00000340882 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
NECTIN1-202ENST00000340882 M0QZ58 72 aa6.3□□□□□ -1.4
NECTIN1-202ENST00000340882 TMEM258P61165 79 aa6.29□□□□□ -1.4
NECTIN1-202ENST00000340882 LINC01554Q52M75 96 aa6.27□□□□□ -1.41
NECTIN1-202ENST00000340882 TRAV7A0A075B6U4 112 aa6.26□□□□□ -1.41
NECTIN1-202ENST00000340882 KRTAP5-10Q6L8G5 202 aa6.26□□□□□ -1.41
NECTIN1-202ENST00000340882 MT4P47944 62 aa6.24□□□□□ -1.41
NECTIN1-202ENST00000340882 LOC101927531A0A1B0GV80 90 aa6.22□□□□□ -1.41
NECTIN1-202ENST00000340882 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
NECTIN1-202ENST00000340882 TRAV22A0A0B4J277 110 aa6.19□□□□□ -1.42
NECTIN1-202ENST00000340882 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
NECTIN1-202ENST00000340882 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
NECTIN1-202ENST00000340882 ATP5EP56381 51 aaPredicted RBP6.17□□□□□ -1.42
NECTIN1-202ENST00000340882 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
NECTIN1-202ENST00000340882 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
NECTIN1-202ENST00000340882 C20orf197Q8N268 126 aa6.15□□□□□ -1.42
NECTIN1-202ENST00000340882 MT1EP04732 61 aa6.13□□□□□ -1.43
NECTIN1-202ENST00000340882 CYSTM1Q9H1C7 97 aa6.1□□□□□ -1.43
NECTIN1-202ENST00000340882 H7BZZ5 65 aa6.09□□□□□ -1.43
NECTIN1-202ENST00000340882 KRTAP5-7Q6L8G8 165 aa6.08□□□□□ -1.44
NECTIN1-202ENST00000340882 OCR1Q9BZK8 76 aa6.08□□□□□ -1.44
NECTIN1-202ENST00000340882 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
NECTIN1-202ENST00000340882 SERP1Q9Y6X1 66 aa6.07□□□□□ -1.44
NECTIN1-202ENST00000340882 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
NECTIN1-202ENST00000340882 H0Y9P7 68 aa6.03□□□□□ -1.44
NECTIN1-202ENST00000340882 SNURFQ9Y675 71 aa6.01□□□□□ -1.45
NECTIN1-202ENST00000340882 H3BPC8 53 aa5.98□□□□□ -1.45
NECTIN1-202ENST00000340882 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
NECTIN1-202ENST00000340882 SMIM26A0A096LP01 95 aa5.96□□□□□ -1.46
NECTIN1-202ENST00000340882 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
NECTIN1-202ENST00000340882 MP68P56378 58 aa5.95□□□□□ -1.46
NECTIN1-202ENST00000340882 MT1GP13640 62 aa5.94□□□□□ -1.46
NECTIN1-202ENST00000340882 MT1MQ8N339 61 aa5.89□□□□□ -1.47
NECTIN1-202ENST00000340882 LINC00208Q96KT6 92 aa5.88□□□□□ -1.47
NECTIN1-202ENST00000340882 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
NECTIN1-202ENST00000340882 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
NECTIN1-202ENST00000340882 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
NECTIN1-202ENST00000340882 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
NECTIN1-202ENST00000340882 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
NECTIN1-202ENST00000340882 V9GYY9 64 aa5.79□□□□□ -1.48
NECTIN1-202ENST00000340882 DMAC1Q96GE9 116 aa5.78□□□□□ -1.48
NECTIN1-202ENST00000340882 Q1T7F1 81 aa5.75□□□□□ -1.49
NECTIN1-202ENST00000340882 MT1LQ93083 61 aa5.75□□□□□ -1.49
NECTIN1-202ENST00000340882 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
NECTIN1-202ENST00000340882 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
NECTIN1-202ENST00000340882 A0A0D9SG42 100 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms