RNA–Protein interactions for RNA: ENST00000340107.8

FGFR3-202, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FGFR3, Length 4,293 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-202ENST00000340107 FAT1Q14517 4588 aa8.81□□□□□ -1
FGFR3-202ENST00000340107 PRKDCP78527 4128 aaKnown RBP8.8□□□□□ -1
FGFR3-202ENST00000340107 VPS13DQ5THJ4 4388 aa8.72□□□□□ -1.01
FGFR3-202ENST00000340107 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
FGFR3-202ENST00000340107 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
FGFR3-202ENST00000340107 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
FGFR3-202ENST00000340107 DYNC1H1Q14204 4646 aaKnown RBP8.63□□□□□ -1.03
FGFR3-202ENST00000340107 ANK2Q01484 3957 aa8.61□□□□□ -1.03
FGFR3-202ENST00000340107 KMT2AQ03164 3969 aa8.6□□□□□ -1.03
FGFR3-202ENST00000340107 DNAH17Q9UFH2 4485 aa8.6□□□□□ -1.03
FGFR3-202ENST00000340107 DNAH8Q96JB1 4490 aa8.58□□□□□ -1.04
FGFR3-202ENST00000340107 LYSTQ99698 3801 aa8.58□□□□□ -1.04
FGFR3-202ENST00000340107 RYR1P21817 5038 aa8.54□□□□□ -1.04
FGFR3-202ENST00000340107 ALMS1Q8TCU4 4167 aa8.53□□□□□ -1.04
FGFR3-202ENST00000340107 PRO2289Q9P1D8 64 aa8.52□□□□□ -1.05
FGFR3-202ENST00000340107 DNAH2Q9P225 4427 aa8.51□□□□□ -1.05
FGFR3-202ENST00000340107 KIAA1109Q2LD37 5005 aa8.48□□□□□ -1.05
FGFR3-202ENST00000340107 MYCBP2O75592 4640 aa8.45□□□□□ -1.06
FGFR3-202ENST00000340107 SACSQ9NZJ4 4579 aa8.34□□□□□ -1.07
FGFR3-202ENST00000340107 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
FGFR3-202ENST00000340107 VPS13BQ7Z7G8 4022 aa8.29□□□□□ -1.08
FGFR3-202ENST00000340107 DNAH3Q8TD57 4116 aa8.26□□□□□ -1.09
FGFR3-202ENST00000340107 RYR3Q15413 4870 aa8.26□□□□□ -1.09
FGFR3-202ENST00000340107 DYNC2H1Q8NCM8 4307 aaKnown RBP8.24□□□□□ -1.09
FGFR3-202ENST00000340107 FAT3Q8TDW7 4589 aa8.23□□□□□ -1.09
FGFR3-202ENST00000340107 FAT2Q9NYQ8 4349 aa8.22□□□□□ -1.09
FGFR3-202ENST00000340107 LRP1Q07954 4544 aaKnown RBP8.21□□□□□ -1.1
FGFR3-202ENST00000340107 DNAH6Q9C0G6 4158 aa8.19□□□□□ -1.1
FGFR3-202ENST00000340107 KRTAP4-1Q9BYQ7 146 aa8.18□□□□□ -1.1
FGFR3-202ENST00000340107 CMYA5Q8N3K9 4069 aa8.18□□□□□ -1.1
FGFR3-202ENST00000340107 DNAH7Q8WXX0 4024 aa8.17□□□□□ -1.1
FGFR3-202ENST00000340107 FRAS1Q86XX4 4008 aa8.16□□□□□ -1.1
FGFR3-202ENST00000340107 APOBP04114 4563 aaKnown RBP8.15□□□□□ -1.1
FGFR3-202ENST00000340107 KRTAP17-1Q9BYP8 105 aa8.09□□□□□ -1.12
FGFR3-202ENST00000340107 HYDINQ4G0P3 5121 aa8.06□□□□□ -1.12
FGFR3-202ENST00000340107 HECTD4Q9Y4D8 3996 aa8□□□□□ -1.13
FGFR3-202ENST00000340107 PKHD1P08F94 4074 aa7.96□□□□□ -1.14
FGFR3-202ENST00000340107 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.14
FGFR3-202ENST00000340107 RYR2Q92736 4967 aa7.88□□□□□ -1.15
FGFR3-202ENST00000340107 LRP2P98164 4655 aa7.87□□□□□ -1.15
FGFR3-202ENST00000340107 KRTAP10-12P60413 245 aa7.86□□□□□ -1.15
FGFR3-202ENST00000340107 HERC2O95714 4834 aa7.83□□□□□ -1.16
FGFR3-202ENST00000340107 KMT2CQ8NEZ4 4911 aaKnown RBP7.81□□□□□ -1.16
FGFR3-202ENST00000340107 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
FGFR3-202ENST00000340107 MT1HP80294 61 aa7.72□□□□□ -1.17
FGFR3-202ENST00000340107 KRTAP12-3P60328 96 aa7.69□□□□□ -1.18
FGFR3-202ENST00000340107 MT2AP02795 61 aa7.64□□□□□ -1.19
FGFR3-202ENST00000340107 HSPG2P98160 4391 aa7.6□□□□□ -1.19
FGFR3-202ENST00000340107 MT1FP04733 61 aa7.55□□□□□ -1.2
FGFR3-202ENST00000340107 LCE2DQ5TA82 110 aaPredicted RBP7.52□□□□□ -1.21
FGFR3-202ENST00000340107 PKD1P98161 4303 aa7.52□□□□□ -1.21
FGFR3-202ENST00000340107 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
FGFR3-202ENST00000340107 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
FGFR3-202ENST00000340107 CRCT1Q9UGL9 99 aa7.49□□□□□ -1.21
FGFR3-202ENST00000340107 LPAP08519 4548 aa7.45□□□□□ -1.22
FGFR3-202ENST00000340107 BIRC6Q9NR09 4857 aa7.38□□□□□ -1.23
FGFR3-202ENST00000340107 PCLOQ9Y6V0 5065 aa7.38□□□□□ -1.23
FGFR3-202ENST00000340107 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
FGFR3-202ENST00000340107 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
FGFR3-202ENST00000340107 ABCA13Q86UQ4 5058 aa7.26□□□□□ -1.25
FGFR3-202ENST00000340107 HERC1Q15751 4861 aa7.22□□□□□ -1.25
FGFR3-202ENST00000340107 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
FGFR3-202ENST00000340107 LCE2CQ5TA81 110 aa7.15□□□□□ -1.27
FGFR3-202ENST00000340107 TNXBP22105 4242 aa7.09□□□□□ -1.27
FGFR3-202ENST00000340107 PKHD1L1Q86WI1 4243 aa7.08□□□□□ -1.28
FGFR3-202ENST00000340107 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
FGFR3-202ENST00000340107 INE1O15225 51 aa7.05□□□□□ -1.28
FGFR3-202ENST00000340107 KRTAP19-8Q3LI54 63 aa7.05□□□□□ -1.28
FGFR3-202ENST00000340107 KRTAP19-5Q3LI72 72 aa7.04□□□□□ -1.28
FGFR3-202ENST00000340107 KRTAP10-7P60409 375 aaPredicted RBP7.03□□□□□ -1.28
FGFR3-202ENST00000340107 LCE2BO14633 110 aa7.01□□□□□ -1.29
FGFR3-202ENST00000340107 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
FGFR3-202ENST00000340107 MT1BP07438 61 aa6.98□□□□□ -1.29
FGFR3-202ENST00000340107 MT1XP80297 61 aa6.95□□□□□ -1.3
FGFR3-202ENST00000340107 MUC17Q685J3 4493 aa6.94□□□□□ -1.3
FGFR3-202ENST00000340107 RNF213Q63HN8 5207 aa6.94□□□□□ -1.3
FGFR3-202ENST00000340107 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
FGFR3-202ENST00000340107 MUC2Q02817 5179 aa6.93□□□□□ -1.3
FGFR3-202ENST00000340107 KRTAP10-5P60370 271 aa6.9□□□□□ -1.31
FGFR3-202ENST00000340107 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
FGFR3-202ENST00000340107 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.32
FGFR3-202ENST00000340107 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
FGFR3-202ENST00000340107 LCE3CQ5T5A8 94 aa6.8□□□□□ -1.32
FGFR3-202ENST00000340107 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
FGFR3-202ENST00000340107 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
FGFR3-202ENST00000340107 FLGP20930 4061 aaPredicted RBP6.79□□□□□ -1.32
FGFR3-202ENST00000340107 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
FGFR3-202ENST00000340107 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
FGFR3-202ENST00000340107 HMCN2Q8NDA2 5059 aa6.59□□□□□ -1.35
FGFR3-202ENST00000340107 SYNE1Q8NF91 8797 aaKnown RBP6.57□□□□□ -1.36
FGFR3-202ENST00000340107 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
FGFR3-202ENST00000340107 MT1GP13640 62 aa6.38□□□□□ -1.39
FGFR3-202ENST00000340107 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
FGFR3-202ENST00000340107 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
FGFR3-202ENST00000340107 OBSCNQ5VST9 7968 aa6.27□□□□□ -1.4
FGFR3-202ENST00000340107 SPRR2EP22531 72 aa6.26□□□□□ -1.41
FGFR3-202ENST00000340107 SPRR2BP35325 72 aa6.26□□□□□ -1.41
FGFR3-202ENST00000340107 SPRR2AP35326 72 aa6.26□□□□□ -1.41
FGFR3-202ENST00000340107 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
FGFR3-202ENST00000340107 MT1LQ93083 61 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms