RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 DNAH2Q9P225 4427 aa6.13□□□□□ -1.43
RIOK3-201ENST00000339486 KMT2AQ03164 3969 aa6.12□□□□□ -1.43
RIOK3-201ENST00000339486 DNAH3Q8TD57 4116 aa6.11□□□□□ -1.43
RIOK3-201ENST00000339486 DNAH5Q8TE73 4624 aa6.1□□□□□ -1.43
RIOK3-201ENST00000339486 CMYA5Q8N3K9 4069 aa6.08□□□□□ -1.44
RIOK3-201ENST00000339486 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
RIOK3-201ENST00000339486 PRKDCP78527 4128 aaKnown RBP6.04□□□□□ -1.44
RIOK3-201ENST00000339486 KRTAP10-4P60372 401 aaPredicted RBP6.03□□□□□ -1.44
RIOK3-201ENST00000339486 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
RIOK3-201ENST00000339486 FAT1Q14517 4588 aa6.02□□□□□ -1.45
RIOK3-201ENST00000339486 M0R2T5 61 aa6.01□□□□□ -1.45
RIOK3-201ENST00000339486 HECTD4Q9Y4D8 3996 aa6□□□□□ -1.45
RIOK3-201ENST00000339486 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
RIOK3-201ENST00000339486 TNP1P09430 55 aa5.97□□□□□ -1.45
RIOK3-201ENST00000339486 DNAH6Q9C0G6 4158 aa5.96□□□□□ -1.46
RIOK3-201ENST00000339486 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
RIOK3-201ENST00000339486 KRTAP21-3Q3LHN1 58 aa5.95□□□□□ -1.46
RIOK3-201ENST00000339486 DNHD1Q96M86 4753 aa5.94□□□□□ -1.46
RIOK3-201ENST00000339486 DYNC2H1Q8NCM8 4307 aaKnown RBP5.89□□□□□ -1.47
RIOK3-201ENST00000339486 DYNC1H1Q14204 4646 aaKnown RBP5.89□□□□□ -1.47
RIOK3-201ENST00000339486 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
RIOK3-201ENST00000339486 SACSQ9NZJ4 4579 aa5.83□□□□□ -1.48
RIOK3-201ENST00000339486 MT1HL1P0DM35 61 aa5.82□□□□□ -1.48
RIOK3-201ENST00000339486 APOBP04114 4563 aaKnown RBP5.71□□□□□ -1.5
RIOK3-201ENST00000339486 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
RIOK3-201ENST00000339486 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
RIOK3-201ENST00000339486 FAT2Q9NYQ8 4349 aa5.66□□□□□ -1.5
RIOK3-201ENST00000339486 HYDINQ4G0P3 5121 aa5.65□□□□□ -1.5
RIOK3-201ENST00000339486 PKHD1P08F94 4074 aa5.63□□□□□ -1.51
RIOK3-201ENST00000339486 FAT3Q8TDW7 4589 aa5.56□□□□□ -1.52
RIOK3-201ENST00000339486 RYR1P21817 5038 aa5.54□□□□□ -1.52
RIOK3-201ENST00000339486 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
RIOK3-201ENST00000339486 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
RIOK3-201ENST00000339486 PKD1P98161 4303 aa5.49□□□□□ -1.53
RIOK3-201ENST00000339486 KIAA1109Q2LD37 5005 aa5.49□□□□□ -1.53
RIOK3-201ENST00000339486 LRP2P98164 4655 aa5.45□□□□□ -1.54
RIOK3-201ENST00000339486 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
RIOK3-201ENST00000339486 HSPG2P98160 4391 aa5.41□□□□□ -1.54
RIOK3-201ENST00000339486 RYR3Q15413 4870 aa5.38□□□□□ -1.55
RIOK3-201ENST00000339486 KRTAP17-1Q9BYP8 105 aa5.36□□□□□ -1.55
RIOK3-201ENST00000339486 KMT2CQ8NEZ4 4911 aaKnown RBP5.32□□□□□ -1.56
RIOK3-201ENST00000339486 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
RIOK3-201ENST00000339486 PKHD1L1Q86WI1 4243 aa5.28□□□□□ -1.56
RIOK3-201ENST00000339486 RYR2Q92736 4967 aa5.28□□□□□ -1.56
RIOK3-201ENST00000339486 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
RIOK3-201ENST00000339486 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
RIOK3-201ENST00000339486 LPAP08519 4548 aa5.18□□□□□ -1.58
RIOK3-201ENST00000339486 TNXBP22105 4242 aa5.18□□□□□ -1.58
RIOK3-201ENST00000339486 INE1O15225 51 aa5.14□□□□□ -1.59
RIOK3-201ENST00000339486 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
RIOK3-201ENST00000339486 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
RIOK3-201ENST00000339486 SPRR2GQ9BYE4 73 aa5.03□□□□□ -1.6
RIOK3-201ENST00000339486 HERC2O95714 4834 aa4.99□□□□□ -1.61
RIOK3-201ENST00000339486 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
RIOK3-201ENST00000339486 KRTAP19-1Q8IUB9 90 aa4.94□□□□□ -1.62
RIOK3-201ENST00000339486 MT2AP02795 61 aa4.92□□□□□ -1.62
RIOK3-201ENST00000339486 MT1FP04733 61 aa4.9□□□□□ -1.62
RIOK3-201ENST00000339486 MT1HP80294 61 aa4.9□□□□□ -1.62
RIOK3-201ENST00000339486 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.62
RIOK3-201ENST00000339486 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
RIOK3-201ENST00000339486 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
RIOK3-201ENST00000339486 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
RIOK3-201ENST00000339486 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
RIOK3-201ENST00000339486 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
RIOK3-201ENST00000339486 MUC2Q02817 5179 aa4.79□□□□□ -1.64
RIOK3-201ENST00000339486 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
RIOK3-201ENST00000339486 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.65
RIOK3-201ENST00000339486 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
RIOK3-201ENST00000339486 MT1XP80297 61 aa4.7□□□□□ -1.66
RIOK3-201ENST00000339486 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
RIOK3-201ENST00000339486 KRTAP10-5P60370 271 aa4.68□□□□□ -1.66
RIOK3-201ENST00000339486 HERC1Q15751 4861 aa4.68□□□□□ -1.66
RIOK3-201ENST00000339486 MT1BP07438 61 aa4.66□□□□□ -1.66
RIOK3-201ENST00000339486 FAT4Q6V0I7 4981 aa4.65□□□□□ -1.66
RIOK3-201ENST00000339486 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
RIOK3-201ENST00000339486 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
RIOK3-201ENST00000339486 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
RIOK3-201ENST00000339486 BIRC6Q9NR09 4857 aa4.6□□□□□ -1.67
RIOK3-201ENST00000339486 PCLOQ9Y6V0 5065 aa4.58□□□□□ -1.68
RIOK3-201ENST00000339486 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
RIOK3-201ENST00000339486 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
RIOK3-201ENST00000339486 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
RIOK3-201ENST00000339486 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
RIOK3-201ENST00000339486 KRTAP9-3Q9BYQ3 159 aa4.45□□□□□ -1.7
RIOK3-201ENST00000339486 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
RIOK3-201ENST00000339486 LCE2DQ5TA82 110 aaPredicted RBP4.37□□□□□ -1.71
RIOK3-201ENST00000339486 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
RIOK3-201ENST00000339486 LCE2BO14633 110 aa4.29□□□□□ -1.72
RIOK3-201ENST00000339486 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
RIOK3-201ENST00000339486 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
RIOK3-201ENST00000339486 MT1GP13640 62 aa4.17□□□□□ -1.74
RIOK3-201ENST00000339486 MT1LQ93083 61 aa4.15□□□□□ -1.74
RIOK3-201ENST00000339486 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
RIOK3-201ENST00000339486 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
RIOK3-201ENST00000339486 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
RIOK3-201ENST00000339486 KMT2DO14686 5537 aa4.12□□□□□ -1.75
RIOK3-201ENST00000339486 MT1EP04732 61 aa4.11□□□□□ -1.75
RIOK3-201ENST00000339486 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
RIOK3-201ENST00000339486 USH2AO75445 5202 aa4.09□□□□□ -1.75
RIOK3-201ENST00000339486 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms