RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 DNAH8Q96JB1 4490 aa6.66□□□□□ -1.34
EPHB3-201ENST00000330394 DNAH5Q8TE73 4624 aa6.63□□□□□ -1.35
EPHB3-201ENST00000330394 FAT1Q14517 4588 aa6.62□□□□□ -1.35
EPHB3-201ENST00000330394 KMT2AQ03164 3969 aa6.6□□□□□ -1.35
EPHB3-201ENST00000330394 LRP1BQ9NZR2 4599 aa6.6□□□□□ -1.35
EPHB3-201ENST00000330394 PRKDCP78527 4128 aaKnown RBP6.59□□□□□ -1.35
EPHB3-201ENST00000330394 KRTAP10-4P60372 401 aaPredicted RBP6.55□□□□□ -1.36
EPHB3-201ENST00000330394 KRTAP10-10P60014 251 aa6.52□□□□□ -1.36
EPHB3-201ENST00000330394 VPS13DQ5THJ4 4388 aa6.51□□□□□ -1.37
EPHB3-201ENST00000330394 FRAS1Q86XX4 4008 aa6.49□□□□□ -1.37
EPHB3-201ENST00000330394 MYCBP2O75592 4640 aa6.47□□□□□ -1.37
EPHB3-201ENST00000330394 DNAH17Q9UFH2 4485 aa6.47□□□□□ -1.37
EPHB3-201ENST00000330394 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
EPHB3-201ENST00000330394 DNAH7Q8WXX0 4024 aa6.45□□□□□ -1.38
EPHB3-201ENST00000330394 DNAH2Q9P225 4427 aa6.44□□□□□ -1.38
EPHB3-201ENST00000330394 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
EPHB3-201ENST00000330394 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
EPHB3-201ENST00000330394 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
EPHB3-201ENST00000330394 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
EPHB3-201ENST00000330394 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
EPHB3-201ENST00000330394 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
EPHB3-201ENST00000330394 DNAH3Q8TD57 4116 aa6.27□□□□□ -1.41
EPHB3-201ENST00000330394 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
EPHB3-201ENST00000330394 RYR1P21817 5038 aa6.24□□□□□ -1.41
EPHB3-201ENST00000330394 LRP1Q07954 4544 aaKnown RBP6.23□□□□□ -1.41
EPHB3-201ENST00000330394 SACSQ9NZJ4 4579 aa6.22□□□□□ -1.41
EPHB3-201ENST00000330394 ALMS1Q8TCU4 4167 aa6.22□□□□□ -1.41
EPHB3-201ENST00000330394 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.42
EPHB3-201ENST00000330394 HECTD4Q9Y4D8 3996 aa6.2□□□□□ -1.42
EPHB3-201ENST00000330394 DYNC2H1Q8NCM8 4307 aaKnown RBP6.19□□□□□ -1.42
EPHB3-201ENST00000330394 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.42
EPHB3-201ENST00000330394 HYDINQ4G0P3 5121 aa6.14□□□□□ -1.43
EPHB3-201ENST00000330394 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
EPHB3-201ENST00000330394 PKHD1P08F94 4074 aa6.09□□□□□ -1.43
EPHB3-201ENST00000330394 FAT2Q9NYQ8 4349 aa6.05□□□□□ -1.44
EPHB3-201ENST00000330394 KRTAP17-1Q9BYP8 105 aa6.01□□□□□ -1.45
EPHB3-201ENST00000330394 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
EPHB3-201ENST00000330394 RYR3Q15413 4870 aa6.01□□□□□ -1.45
EPHB3-201ENST00000330394 LCE3AQ5TA76 89 aa5.99□□□□□ -1.45
EPHB3-201ENST00000330394 LRP2P98164 4655 aa5.96□□□□□ -1.46
EPHB3-201ENST00000330394 INE1O15225 51 aa5.93□□□□□ -1.46
EPHB3-201ENST00000330394 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
EPHB3-201ENST00000330394 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
EPHB3-201ENST00000330394 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
EPHB3-201ENST00000330394 KMT2CQ8NEZ4 4911 aaKnown RBP5.81□□□□□ -1.48
EPHB3-201ENST00000330394 PKD1P98161 4303 aa5.74□□□□□ -1.49
EPHB3-201ENST00000330394 RYR2Q92736 4967 aa5.74□□□□□ -1.49
EPHB3-201ENST00000330394 LPAP08519 4548 aa5.72□□□□□ -1.49
EPHB3-201ENST00000330394 HSPG2P98160 4391 aa5.72□□□□□ -1.49
EPHB3-201ENST00000330394 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.5
EPHB3-201ENST00000330394 HERC2O95714 4834 aa5.61□□□□□ -1.51
EPHB3-201ENST00000330394 EPPK1P58107 5090 aaKnown RBP5.53□□□□□ -1.52
EPHB3-201ENST00000330394 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
EPHB3-201ENST00000330394 MT2AP02795 61 aa5.48□□□□□ -1.53
EPHB3-201ENST00000330394 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
EPHB3-201ENST00000330394 MT1HP80294 61 aa5.48□□□□□ -1.53
EPHB3-201ENST00000330394 MT1FP04733 61 aa5.46□□□□□ -1.54
EPHB3-201ENST00000330394 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
EPHB3-201ENST00000330394 MUC2Q02817 5179 aa5.4□□□□□ -1.54
EPHB3-201ENST00000330394 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
EPHB3-201ENST00000330394 TNXBP22105 4242 aa5.39□□□□□ -1.55
EPHB3-201ENST00000330394 ABCA13Q86UQ4 5058 aa5.36□□□□□ -1.55
EPHB3-201ENST00000330394 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
EPHB3-201ENST00000330394 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
EPHB3-201ENST00000330394 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
EPHB3-201ENST00000330394 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
EPHB3-201ENST00000330394 KRTAP10-7P60409 375 aaPredicted RBP5.27□□□□□ -1.57
EPHB3-201ENST00000330394 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
EPHB3-201ENST00000330394 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
EPHB3-201ENST00000330394 RNF213Q63HN8 5207 aa5.23□□□□□ -1.57
EPHB3-201ENST00000330394 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
EPHB3-201ENST00000330394 LCE2CQ5TA81 110 aa5.19□□□□□ -1.58
EPHB3-201ENST00000330394 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
EPHB3-201ENST00000330394 HERC1Q15751 4861 aa5.17□□□□□ -1.58
EPHB3-201ENST00000330394 MT1XP80297 61 aa5.16□□□□□ -1.58
EPHB3-201ENST00000330394 UBR4Q5T4S7 5183 aa5.13□□□□□ -1.59
EPHB3-201ENST00000330394 KRTAP19-8Q3LI54 63 aa5.12□□□□□ -1.59
EPHB3-201ENST00000330394 MT1BP07438 61 aa5.1□□□□□ -1.59
EPHB3-201ENST00000330394 KRTAP9-8Q9BYQ0 159 aa5.1□□□□□ -1.59
EPHB3-201ENST00000330394 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
EPHB3-201ENST00000330394 BIRC6Q9NR09 4857 aa5.08□□□□□ -1.6
EPHB3-201ENST00000330394 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
EPHB3-201ENST00000330394 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
EPHB3-201ENST00000330394 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
EPHB3-201ENST00000330394 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
EPHB3-201ENST00000330394 HMCN2Q8NDA2 5059 aa4.96□□□□□ -1.62
EPHB3-201ENST00000330394 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
EPHB3-201ENST00000330394 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
EPHB3-201ENST00000330394 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
EPHB3-201ENST00000330394 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
EPHB3-201ENST00000330394 MT1GP13640 62 aa4.81□□□□□ -1.64
EPHB3-201ENST00000330394 LCE2BO14633 110 aa4.79□□□□□ -1.64
EPHB3-201ENST00000330394 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
EPHB3-201ENST00000330394 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
EPHB3-201ENST00000330394 USH2AO75445 5202 aa4.71□□□□□ -1.66
EPHB3-201ENST00000330394 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
EPHB3-201ENST00000330394 KMT2DO14686 5537 aa4.64□□□□□ -1.67
EPHB3-201ENST00000330394 MT1LQ93083 61 aa4.61□□□□□ -1.67
EPHB3-201ENST00000330394 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
EPHB3-201ENST00000330394 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms