RNA–Protein interactions for RNA: ENST00000329078.7

SPNS2-201, Transcript of sphingolipid transporter 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS2, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-201ENST00000329078 APOBP04114 4563 aaKnown RBP10.55□□□□□ -0.72
SPNS2-201ENST00000329078 A0A1B0GVY2 172 aa10.52□□□□□ -0.72
SPNS2-201ENST00000329078 RPS29P62273 56 aaKnown RBP10.52□□□□□ -0.73
SPNS2-201ENST00000329078 Q5VSD8 79 aa10.51□□□□□ -0.73
SPNS2-201ENST00000329078 KRTAP10-4P60372 401 aaPredicted RBP10.46□□□□□ -0.73
SPNS2-201ENST00000329078 COX6B2Q6YFQ2 88 aa10.45□□□□□ -0.74
SPNS2-201ENST00000329078 FAT3Q8TDW7 4589 aa10.36□□□□□ -0.75
SPNS2-201ENST00000329078 RYR2Q92736 4967 aa10.3□□□□□ -0.76
SPNS2-201ENST00000329078 KIAA1109Q2LD37 5005 aa10.29□□□□□ -0.76
SPNS2-201ENST00000329078 KRTAP10-8P60410 259 aa10.29□□□□□ -0.76
SPNS2-201ENST00000329078 TPRXLQ17RH7 258 aa10.26□□□□□ -0.77
SPNS2-201ENST00000329078 HSPG2P98160 4391 aa10.26□□□□□ -0.77
SPNS2-201ENST00000329078 XP32Q5T750 250 aa10.24□□□□□ -0.77
SPNS2-201ENST00000329078 PKHD1L1Q86WI1 4243 aa10.24□□□□□ -0.77
SPNS2-201ENST00000329078 KRTAP21-3Q3LHN1 58 aa10.23□□□□□ -0.77
SPNS2-201ENST00000329078 RPL37P61927 97 aaKnown RBP10.22□□□□□ -0.77
SPNS2-201ENST00000329078 S4R3F8 94 aa10.22□□□□□ -0.77
SPNS2-201ENST00000329078 KRTAP13-4Q3LI77 160 aa10.21□□□□□ -0.77
SPNS2-201ENST00000329078 LUZP6Q538Z0 58 aa10.17□□□□□ -0.78
SPNS2-201ENST00000329078 RYR3Q15413 4870 aa10.16□□□□□ -0.78
SPNS2-201ENST00000329078 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
SPNS2-201ENST00000329078 RYR1P21817 5038 aa10.1□□□□□ -0.79
SPNS2-201ENST00000329078 LRP2P98164 4655 aa10.05□□□□□ -0.8
SPNS2-201ENST00000329078 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
SPNS2-201ENST00000329078 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
SPNS2-201ENST00000329078 LPAP08519 4548 aa10.01□□□□□ -0.81
SPNS2-201ENST00000329078 TNXBP22105 4242 aa9.99□□□□□ -0.81
SPNS2-201ENST00000329078 KRTAP15-1Q3LI76 137 aa9.98□□□□□ -0.81
SPNS2-201ENST00000329078 KRTAP12-2P59991 146 aa9.94□□□□□ -0.82
SPNS2-201ENST00000329078 MT1HL1P0DM35 61 aa9.91□□□□□ -0.82
SPNS2-201ENST00000329078 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
SPNS2-201ENST00000329078 KRTAP4-5Q9BYR2 181 aa9.83□□□□□ -0.84
SPNS2-201ENST00000329078 EPPK1P58107 5090 aaKnown RBP9.82□□□□□ -0.84
SPNS2-201ENST00000329078 ABCA13Q86UQ4 5058 aa9.78□□□□□ -0.84
SPNS2-201ENST00000329078 J3QL48 77 aa9.78□□□□□ -0.84
SPNS2-201ENST00000329078 M0QZ58 72 aa9.73□□□□□ -0.85
SPNS2-201ENST00000329078 KRTAP12-1P59990 96 aa9.69□□□□□ -0.86
SPNS2-201ENST00000329078 R4GN34 69 aa9.68□□□□□ -0.86
SPNS2-201ENST00000329078 PLAC4Q8WY50 150 aa9.54□□□□□ -0.88
SPNS2-201ENST00000329078 MUC2Q02817 5179 aa9.53□□□□□ -0.88
SPNS2-201ENST00000329078 SEC61BP60468 96 aaKnown RBP9.52□□□□□ -0.89
SPNS2-201ENST00000329078 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
SPNS2-201ENST00000329078 HERC2O95714 4834 aa9.39□□□□□ -0.91
SPNS2-201ENST00000329078 KRTAP4-1Q9BYQ7 146 aa9.38□□□□□ -0.91
SPNS2-201ENST00000329078 CAMK2N1Q7Z7J9 78 aa9.34□□□□□ -0.91
SPNS2-201ENST00000329078 HERC1Q15751 4861 aa9.11□□□□□ -0.95
SPNS2-201ENST00000329078 M0R2T5 61 aa9.05□□□□□ -0.96
SPNS2-201ENST00000329078 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
SPNS2-201ENST00000329078 MUC17Q685J3 4493 aa9.05□□□□□ -0.96
SPNS2-201ENST00000329078 RNF213Q63HN8 5207 aa8.96□□□□□ -0.98
SPNS2-201ENST00000329078 PCLOQ9Y6V0 5065 aa8.83□□□□□ -1
SPNS2-201ENST00000329078 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
SPNS2-201ENST00000329078 BIRC6Q9NR09 4857 aa8.71□□□□□ -1.01
SPNS2-201ENST00000329078 TNP1P09430 55 aa8.7□□□□□ -1.02
SPNS2-201ENST00000329078 FLGP20930 4061 aaPredicted RBP8.69□□□□□ -1.02
SPNS2-201ENST00000329078 UBR4Q5T4S7 5183 aa8.67□□□□□ -1.02
SPNS2-201ENST00000329078 PP632Q6XCG6 107 aa8.64□□□□□ -1.03
SPNS2-201ENST00000329078 KRTAP10-10P60014 251 aa8.6□□□□□ -1.03
SPNS2-201ENST00000329078 HMCN2Q8NDA2 5059 aa8.58□□□□□ -1.04
SPNS2-201ENST00000329078 LCE2CQ5TA81 110 aa8.41□□□□□ -1.06
SPNS2-201ENST00000329078 PRO2289Q9P1D8 64 aa8.39□□□□□ -1.07
SPNS2-201ENST00000329078 MT1HP80294 61 aa8.33□□□□□ -1.08
SPNS2-201ENST00000329078 KRTAP19-1Q8IUB9 90 aa8.32□□□□□ -1.08
SPNS2-201ENST00000329078 MT1FP04733 61 aa8.29□□□□□ -1.08
SPNS2-201ENST00000329078 LCE3AQ5TA76 89 aa8.24□□□□□ -1.09
SPNS2-201ENST00000329078 MT2AP02795 61 aa8.23□□□□□ -1.09
SPNS2-201ENST00000329078 SPRR2GQ9BYE4 73 aa8.21□□□□□ -1.1
SPNS2-201ENST00000329078 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
SPNS2-201ENST00000329078 USH2AO75445 5202 aa8.04□□□□□ -1.12
SPNS2-201ENST00000329078 SPRR5A0A1B0GTR4 108 aa8.03□□□□□ -1.12
SPNS2-201ENST00000329078 INE1O15225 51 aa7.97□□□□□ -1.13
SPNS2-201ENST00000329078 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
SPNS2-201ENST00000329078 KMT2DO14686 5537 aa7.88□□□□□ -1.15
SPNS2-201ENST00000329078 MT1BP07438 61 aa7.88□□□□□ -1.15
SPNS2-201ENST00000329078 KRTAP10-12P60413 245 aa7.87□□□□□ -1.15
SPNS2-201ENST00000329078 MT1XP80297 61 aa7.84□□□□□ -1.15
SPNS2-201ENST00000329078 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
SPNS2-201ENST00000329078 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
SPNS2-201ENST00000329078 FSIP2Q5CZC0 6907 aa7.82□□□□□ -1.16
SPNS2-201ENST00000329078 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
SPNS2-201ENST00000329078 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
SPNS2-201ENST00000329078 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
SPNS2-201ENST00000329078 KRTAP9-3Q9BYQ3 159 aa7.68□□□□□ -1.18
SPNS2-201ENST00000329078 LCE2BO14633 110 aa7.53□□□□□ -1.2
SPNS2-201ENST00000329078 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.21
SPNS2-201ENST00000329078 KRTAP4-8Q9BYQ9 185 aa7.52□□□□□ -1.21
SPNS2-201ENST00000329078 KRTAP19-5Q3LI72 72 aa7.5□□□□□ -1.21
SPNS2-201ENST00000329078 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
SPNS2-201ENST00000329078 LCE3CQ5T5A8 94 aa7.22□□□□□ -1.25
SPNS2-201ENST00000329078 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
SPNS2-201ENST00000329078 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
SPNS2-201ENST00000329078 KRTAP9-6A8MVA2 160 aa7.05□□□□□ -1.28
SPNS2-201ENST00000329078 SSPOA2VEC9 5147 aa7.02□□□□□ -1.29
SPNS2-201ENST00000329078 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
SPNS2-201ENST00000329078 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
SPNS2-201ENST00000329078 KRTAP19-7Q3SYF9 63 aa6.95□□□□□ -1.3
SPNS2-201ENST00000329078 FCGBPQ9Y6R7 5405 aaPredicted RBP6.91□□□□□ -1.3
SPNS2-201ENST00000329078 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
SPNS2-201ENST00000329078 MT1LQ93083 61 aa6.78□□□□□ -1.32
SPNS2-201ENST00000329078 OBSCNQ5VST9 7968 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms