RNA–Protein interactions for RNA: ENST00000329043.7

NFXL1-201, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFXL1, Length 3,723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-201ENST00000329043 A0A1B0GVY2 172 aa6.53□□□□□ -1.36
NFXL1-201ENST00000329043 KRTAP10-8P60410 259 aa6.51□□□□□ -1.37
NFXL1-201ENST00000329043 KRTAP10-4P60372 401 aaPredicted RBP6.5□□□□□ -1.37
NFXL1-201ENST00000329043 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
NFXL1-201ENST00000329043 S4R3F8 94 aa6.49□□□□□ -1.37
NFXL1-201ENST00000329043 ROMO1P60602 79 aa6.48□□□□□ -1.37
NFXL1-201ENST00000329043 KIAA1109Q2LD37 5005 aa6.46□□□□□ -1.37
NFXL1-201ENST00000329043 KRTAP21-3Q3LHN1 58 aa6.46□□□□□ -1.37
NFXL1-201ENST00000329043 XP32Q5T750 250 aa6.45□□□□□ -1.38
NFXL1-201ENST00000329043 P0C880 135 aa6.44□□□□□ -1.38
NFXL1-201ENST00000329043 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
NFXL1-201ENST00000329043 HSPG2P98160 4391 aa6.41□□□□□ -1.38
NFXL1-201ENST00000329043 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
NFXL1-201ENST00000329043 RYR1P21817 5038 aa6.36□□□□□ -1.39
NFXL1-201ENST00000329043 RYR3Q15413 4870 aa6.35□□□□□ -1.39
NFXL1-201ENST00000329043 RYR2Q92736 4967 aa6.34□□□□□ -1.39
NFXL1-201ENST00000329043 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
NFXL1-201ENST00000329043 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
NFXL1-201ENST00000329043 LRP2P98164 4655 aa6.32□□□□□ -1.4
NFXL1-201ENST00000329043 PKHD1L1Q86WI1 4243 aa6.32□□□□□ -1.4
NFXL1-201ENST00000329043 KRTAP17-1Q9BYP8 105 aa6.31□□□□□ -1.4
NFXL1-201ENST00000329043 LPAP08519 4548 aa6.26□□□□□ -1.41
NFXL1-201ENST00000329043 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
NFXL1-201ENST00000329043 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
NFXL1-201ENST00000329043 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
NFXL1-201ENST00000329043 M0QZ58 72 aa6.22□□□□□ -1.41
NFXL1-201ENST00000329043 J3QL48 77 aa6.2□□□□□ -1.42
NFXL1-201ENST00000329043 TPRXLQ17RH7 258 aa6.2□□□□□ -1.42
NFXL1-201ENST00000329043 MT1HL1P0DM35 61 aa6.19□□□□□ -1.42
NFXL1-201ENST00000329043 R4GN34 69 aa6.19□□□□□ -1.42
NFXL1-201ENST00000329043 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
NFXL1-201ENST00000329043 TNXBP22105 4242 aa6.14□□□□□ -1.43
NFXL1-201ENST00000329043 EPPK1P58107 5090 aaKnown RBP6.11□□□□□ -1.43
NFXL1-201ENST00000329043 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
NFXL1-201ENST00000329043 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
NFXL1-201ENST00000329043 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
NFXL1-201ENST00000329043 LUZP6Q538Z0 58 aa6.03□□□□□ -1.44
NFXL1-201ENST00000329043 MUC2Q02817 5179 aa6.02□□□□□ -1.45
NFXL1-201ENST00000329043 SEC61BP60468 96 aaKnown RBP5.99□□□□□ -1.45
NFXL1-201ENST00000329043 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
NFXL1-201ENST00000329043 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
NFXL1-201ENST00000329043 HERC2O95714 4834 aa5.86□□□□□ -1.47
NFXL1-201ENST00000329043 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
NFXL1-201ENST00000329043 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
NFXL1-201ENST00000329043 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
NFXL1-201ENST00000329043 M0R2T5 61 aa5.79□□□□□ -1.48
NFXL1-201ENST00000329043 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
NFXL1-201ENST00000329043 HERC1Q15751 4861 aa5.71□□□□□ -1.5
NFXL1-201ENST00000329043 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
NFXL1-201ENST00000329043 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
NFXL1-201ENST00000329043 PCLOQ9Y6V0 5065 aa5.62□□□□□ -1.51
NFXL1-201ENST00000329043 TNP1P09430 55 aa5.6□□□□□ -1.51
NFXL1-201ENST00000329043 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.51
NFXL1-201ENST00000329043 MUC17Q685J3 4493 aa5.58□□□□□ -1.52
NFXL1-201ENST00000329043 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
NFXL1-201ENST00000329043 UBR4Q5T4S7 5183 aa5.46□□□□□ -1.54
NFXL1-201ENST00000329043 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
NFXL1-201ENST00000329043 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
NFXL1-201ENST00000329043 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
NFXL1-201ENST00000329043 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
NFXL1-201ENST00000329043 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
NFXL1-201ENST00000329043 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.57
NFXL1-201ENST00000329043 MT1HP80294 61 aa5.2□□□□□ -1.58
NFXL1-201ENST00000329043 MT1FP04733 61 aa5.2□□□□□ -1.58
NFXL1-201ENST00000329043 MT2AP02795 61 aa5.15□□□□□ -1.58
NFXL1-201ENST00000329043 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
NFXL1-201ENST00000329043 USH2AO75445 5202 aa5.11□□□□□ -1.59
NFXL1-201ENST00000329043 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
NFXL1-201ENST00000329043 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
NFXL1-201ENST00000329043 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
NFXL1-201ENST00000329043 KMT2DO14686 5537 aa5.01□□□□□ -1.61
NFXL1-201ENST00000329043 KRTAP10-12P60413 245 aa4.98□□□□□ -1.61
NFXL1-201ENST00000329043 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
NFXL1-201ENST00000329043 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
NFXL1-201ENST00000329043 MT1BP07438 61 aa4.93□□□□□ -1.62
NFXL1-201ENST00000329043 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
NFXL1-201ENST00000329043 MT1XP80297 61 aa4.92□□□□□ -1.62
NFXL1-201ENST00000329043 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
NFXL1-201ENST00000329043 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
NFXL1-201ENST00000329043 INE1O15225 51 aa4.83□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
NFXL1-201ENST00000329043 LCE2BO14633 110 aa4.71□□□□□ -1.66
NFXL1-201ENST00000329043 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
NFXL1-201ENST00000329043 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
NFXL1-201ENST00000329043 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
NFXL1-201ENST00000329043 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
NFXL1-201ENST00000329043 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
NFXL1-201ENST00000329043 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
NFXL1-201ENST00000329043 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
NFXL1-201ENST00000329043 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
NFXL1-201ENST00000329043 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
NFXL1-201ENST00000329043 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
NFXL1-201ENST00000329043 LCE2AQ5TA79 106 aaPredicted RBP4.38□□□□□ -1.71
NFXL1-201ENST00000329043 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
NFXL1-201ENST00000329043 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms