RNA–Protein interactions for RNA: ENST00000327470.4

FANCF-201, Transcript of FA complementation group F, humanhuman

APPRIS P1 BASIC

Gene FANCF, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCF-201ENST00000327470 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
FANCF-201ENST00000327470 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
FANCF-201ENST00000327470 KRTAP10-4P60372 401 aaPredicted RBP5.16□□□□□ -1.58
FANCF-201ENST00000327470 CMYA5Q8N3K9 4069 aa5.16□□□□□ -1.58
FANCF-201ENST00000327470 DNAH17Q9UFH2 4485 aa5.16□□□□□ -1.58
FANCF-201ENST00000327470 DNAH5Q8TE73 4624 aa5.15□□□□□ -1.58
FANCF-201ENST00000327470 KMT2AQ03164 3969 aa5.13□□□□□ -1.59
FANCF-201ENST00000327470 LYSTQ99698 3801 aa5.11□□□□□ -1.59
FANCF-201ENST00000327470 DNAH2Q9P225 4427 aa5.09□□□□□ -1.59
FANCF-201ENST00000327470 LRP1BQ9NZR2 4599 aa5.09□□□□□ -1.59
FANCF-201ENST00000327470 MT1HL1P0DM35 61 aa5.09□□□□□ -1.59
FANCF-201ENST00000327470 DNAH8Q96JB1 4490 aa5.07□□□□□ -1.6
FANCF-201ENST00000327470 KRTAP10-10P60014 251 aa5.07□□□□□ -1.6
FANCF-201ENST00000327470 FAT1Q14517 4588 aa5.05□□□□□ -1.6
FANCF-201ENST00000327470 ALMS1Q8TCU4 4167 aa5.04□□□□□ -1.6
FANCF-201ENST00000327470 DNAH7Q8WXX0 4024 aa5.02□□□□□ -1.61
FANCF-201ENST00000327470 DYNC1H1Q14204 4646 aaKnown RBP5.01□□□□□ -1.61
FANCF-201ENST00000327470 DYNC2H1Q8NCM8 4307 aaKnown RBP4.99□□□□□ -1.61
FANCF-201ENST00000327470 FRAS1Q86XX4 4008 aa4.94□□□□□ -1.62
FANCF-201ENST00000327470 HECTD4Q9Y4D8 3996 aa4.93□□□□□ -1.62
FANCF-201ENST00000327470 DNAH6Q9C0G6 4158 aa4.92□□□□□ -1.62
FANCF-201ENST00000327470 VPS13BQ7Z7G8 4022 aa4.92□□□□□ -1.62
FANCF-201ENST00000327470 KRTAP4-5Q9BYR2 181 aa4.88□□□□□ -1.63
FANCF-201ENST00000327470 PRO2289Q9P1D8 64 aa4.87□□□□□ -1.63
FANCF-201ENST00000327470 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
FANCF-201ENST00000327470 FAT2Q9NYQ8 4349 aa4.84□□□□□ -1.63
FANCF-201ENST00000327470 HYDINQ4G0P3 5121 aa4.84□□□□□ -1.63
FANCF-201ENST00000327470 INE1O15225 51 aa4.82□□□□□ -1.64
FANCF-201ENST00000327470 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
FANCF-201ENST00000327470 KIAA1109Q2LD37 5005 aa4.8□□□□□ -1.64
FANCF-201ENST00000327470 MYCBP2O75592 4640 aa4.8□□□□□ -1.64
FANCF-201ENST00000327470 RYR1P21817 5038 aa4.78□□□□□ -1.64
FANCF-201ENST00000327470 APOBP04114 4563 aaKnown RBP4.76□□□□□ -1.65
FANCF-201ENST00000327470 PKHD1P08F94 4074 aa4.76□□□□□ -1.65
FANCF-201ENST00000327470 LRP1Q07954 4544 aaKnown RBP4.75□□□□□ -1.65
FANCF-201ENST00000327470 RYR3Q15413 4870 aa4.72□□□□□ -1.65
FANCF-201ENST00000327470 RYR2Q92736 4967 aa4.68□□□□□ -1.66
FANCF-201ENST00000327470 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
FANCF-201ENST00000327470 FAT3Q8TDW7 4589 aa4.64□□□□□ -1.67
FANCF-201ENST00000327470 PKD1P98161 4303 aa4.64□□□□□ -1.67
FANCF-201ENST00000327470 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
FANCF-201ENST00000327470 KMT2CQ8NEZ4 4911 aaKnown RBP4.62□□□□□ -1.67
FANCF-201ENST00000327470 KRTAP4-1Q9BYQ7 146 aa4.62□□□□□ -1.67
FANCF-201ENST00000327470 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
FANCF-201ENST00000327470 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
FANCF-201ENST00000327470 HSPG2P98160 4391 aa4.52□□□□□ -1.69
FANCF-201ENST00000327470 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
FANCF-201ENST00000327470 LRP2P98164 4655 aa4.52□□□□□ -1.69
FANCF-201ENST00000327470 HERC2O95714 4834 aa4.44□□□□□ -1.7
FANCF-201ENST00000327470 CRCT1Q9UGL9 99 aa4.44□□□□□ -1.7
FANCF-201ENST00000327470 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
FANCF-201ENST00000327470 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
FANCF-201ENST00000327470 TNXBP22105 4242 aa4.34□□□□□ -1.71
FANCF-201ENST00000327470 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
FANCF-201ENST00000327470 LPAP08519 4548 aa4.33□□□□□ -1.72
FANCF-201ENST00000327470 MT1HP80294 61 aa4.32□□□□□ -1.72
FANCF-201ENST00000327470 MT2AP02795 61 aa4.32□□□□□ -1.72
FANCF-201ENST00000327470 MT1FP04733 61 aa4.26□□□□□ -1.73
FANCF-201ENST00000327470 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
FANCF-201ENST00000327470 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
FANCF-201ENST00000327470 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
FANCF-201ENST00000327470 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
FANCF-201ENST00000327470 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
FANCF-201ENST00000327470 KRTAP10-5P60370 271 aa4.18□□□□□ -1.74
FANCF-201ENST00000327470 HERC1Q15751 4861 aa4.14□□□□□ -1.75
FANCF-201ENST00000327470 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
FANCF-201ENST00000327470 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
FANCF-201ENST00000327470 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
FANCF-201ENST00000327470 LCE2CQ5TA81 110 aa4.09□□□□□ -1.75
FANCF-201ENST00000327470 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
FANCF-201ENST00000327470 PCLOQ9Y6V0 5065 aa4.07□□□□□ -1.76
FANCF-201ENST00000327470 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
FANCF-201ENST00000327470 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
FANCF-201ENST00000327470 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
FANCF-201ENST00000327470 MT1XP80297 61 aa4.02□□□□□ -1.77
FANCF-201ENST00000327470 MUC2Q02817 5179 aa4.02□□□□□ -1.77
FANCF-201ENST00000327470 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
FANCF-201ENST00000327470 MT1BP07438 61 aa4□□□□□ -1.77
FANCF-201ENST00000327470 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
FANCF-201ENST00000327470 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
FANCF-201ENST00000327470 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
FANCF-201ENST00000327470 FAT4Q6V0I7 4981 aa3.92□□□□□ -1.78
FANCF-201ENST00000327470 HMCN2Q8NDA2 5059 aa3.89□□□□□ -1.79
FANCF-201ENST00000327470 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
FANCF-201ENST00000327470 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
FANCF-201ENST00000327470 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
FANCF-201ENST00000327470 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
FANCF-201ENST00000327470 KRTAP4-8Q9BYQ9 185 aa3.82□□□□□ -1.8
FANCF-201ENST00000327470 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
FANCF-201ENST00000327470 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
FANCF-201ENST00000327470 LCE2BO14633 110 aa3.71□□□□□ -1.82
FANCF-201ENST00000327470 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
FANCF-201ENST00000327470 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.82
FANCF-201ENST00000327470 MT1GP13640 62 aa3.65□□□□□ -1.83
FANCF-201ENST00000327470 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
FANCF-201ENST00000327470 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
FANCF-201ENST00000327470 MT1LQ93083 61 aa3.59□□□□□ -1.83
FANCF-201ENST00000327470 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
FANCF-201ENST00000327470 MT1EP04732 61 aa3.56□□□□□ -1.84
FANCF-201ENST00000327470 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms