RNA–Protein interactions for RNA: ENST00000323456.9

MTMR4-201, Transcript of myotubularin related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTMR4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR4-201ENST00000323456 FRAS1Q86XX4 4008 aa4.93□□□□□ -1.62
MTMR4-201ENST00000323456 STARD9Q9P2P6 4700 aa4.92□□□□□ -1.62
MTMR4-201ENST00000323456 KRTAP10-4P60372 401 aaPredicted RBP4.92□□□□□ -1.62
MTMR4-201ENST00000323456 LYSTQ99698 3801 aa4.92□□□□□ -1.62
MTMR4-201ENST00000323456 KRTAP10-6P60371 365 aaPredicted RBP4.91□□□□□ -1.62
MTMR4-201ENST00000323456 MT1HL1P0DM35 61 aa4.9□□□□□ -1.62
MTMR4-201ENST00000323456 KMT2AQ03164 3969 aa4.88□□□□□ -1.63
MTMR4-201ENST00000323456 DNAH11Q96DT5 4516 aa4.88□□□□□ -1.63
MTMR4-201ENST00000323456 KRTAP4-5Q9BYR2 181 aa4.88□□□□□ -1.63
MTMR4-201ENST00000323456 DYNC2H1Q8NCM8 4307 aaKnown RBP4.87□□□□□ -1.63
MTMR4-201ENST00000323456 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
MTMR4-201ENST00000323456 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.63
MTMR4-201ENST00000323456 DNAH5Q8TE73 4624 aa4.83□□□□□ -1.64
MTMR4-201ENST00000323456 DNHD1Q96M86 4753 aa4.83□□□□□ -1.64
MTMR4-201ENST00000323456 DNAH6Q9C0G6 4158 aa4.8□□□□□ -1.64
MTMR4-201ENST00000323456 DNAH7Q8WXX0 4024 aa4.8□□□□□ -1.64
MTMR4-201ENST00000323456 PRKDCP78527 4128 aaKnown RBP4.79□□□□□ -1.64
MTMR4-201ENST00000323456 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
MTMR4-201ENST00000323456 HECTD4Q9Y4D8 3996 aa4.74□□□□□ -1.65
MTMR4-201ENST00000323456 FAT2Q9NYQ8 4349 aa4.74□□□□□ -1.65
MTMR4-201ENST00000323456 LRP1BQ9NZR2 4599 aa4.73□□□□□ -1.65
MTMR4-201ENST00000323456 VPS13BQ7Z7G8 4022 aa4.71□□□□□ -1.66
MTMR4-201ENST00000323456 SACSQ9NZJ4 4579 aa4.69□□□□□ -1.66
MTMR4-201ENST00000323456 FAT1Q14517 4588 aa4.68□□□□□ -1.66
MTMR4-201ENST00000323456 DYNC1H1Q14204 4646 aaKnown RBP4.67□□□□□ -1.66
MTMR4-201ENST00000323456 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
MTMR4-201ENST00000323456 LORP23490 312 aaPredicted RBP4.62□□□□□ -1.67
MTMR4-201ENST00000323456 MYCBP2O75592 4640 aa4.54□□□□□ -1.68
MTMR4-201ENST00000323456 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
MTMR4-201ENST00000323456 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
MTMR4-201ENST00000323456 HYDINQ4G0P3 5121 aa4.45□□□□□ -1.7
MTMR4-201ENST00000323456 RYR1P21817 5038 aa4.45□□□□□ -1.7
MTMR4-201ENST00000323456 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
MTMR4-201ENST00000323456 FAT3Q8TDW7 4589 aa4.43□□□□□ -1.7
MTMR4-201ENST00000323456 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
MTMR4-201ENST00000323456 PKD1P98161 4303 aa4.4□□□□□ -1.71
MTMR4-201ENST00000323456 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.71
MTMR4-201ENST00000323456 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
MTMR4-201ENST00000323456 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
MTMR4-201ENST00000323456 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
MTMR4-201ENST00000323456 HSPG2P98160 4391 aa4.34□□□□□ -1.71
MTMR4-201ENST00000323456 PKHD1P08F94 4074 aa4.34□□□□□ -1.71
MTMR4-201ENST00000323456 INE1O15225 51 aa4.33□□□□□ -1.72
MTMR4-201ENST00000323456 PKHD1L1Q86WI1 4243 aa4.33□□□□□ -1.72
MTMR4-201ENST00000323456 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
MTMR4-201ENST00000323456 MT1HP80294 61 aa4.3□□□□□ -1.72
MTMR4-201ENST00000323456 TNXBP22105 4242 aa4.29□□□□□ -1.72
MTMR4-201ENST00000323456 RYR3Q15413 4870 aa4.29□□□□□ -1.72
MTMR4-201ENST00000323456 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
MTMR4-201ENST00000323456 RYR2Q92736 4967 aa4.24□□□□□ -1.73
MTMR4-201ENST00000323456 LPAP08519 4548 aa4.22□□□□□ -1.73
MTMR4-201ENST00000323456 MT2AP02795 61 aa4.19□□□□□ -1.74
MTMR4-201ENST00000323456 LRP2P98164 4655 aa4.18□□□□□ -1.74
MTMR4-201ENST00000323456 MT1FP04733 61 aa4.16□□□□□ -1.74
MTMR4-201ENST00000323456 KMT2CQ8NEZ4 4911 aaKnown RBP4.13□□□□□ -1.75
MTMR4-201ENST00000323456 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
MTMR4-201ENST00000323456 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
MTMR4-201ENST00000323456 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
MTMR4-201ENST00000323456 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
MTMR4-201ENST00000323456 HERC2O95714 4834 aa4.01□□□□□ -1.77
MTMR4-201ENST00000323456 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
MTMR4-201ENST00000323456 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
MTMR4-201ENST00000323456 KRTAP19-1Q8IUB9 90 aa3.92□□□□□ -1.78
MTMR4-201ENST00000323456 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.79
MTMR4-201ENST00000323456 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
MTMR4-201ENST00000323456 MT1XP80297 61 aa3.85□□□□□ -1.79
MTMR4-201ENST00000323456 LCE2CQ5TA81 110 aa3.84□□□□□ -1.79
MTMR4-201ENST00000323456 HERC1Q15751 4861 aa3.84□□□□□ -1.8
MTMR4-201ENST00000323456 KRTAP9-8Q9BYQ0 159 aa3.83□□□□□ -1.8
MTMR4-201ENST00000323456 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
MTMR4-201ENST00000323456 BIRC6Q9NR09 4857 aa3.82□□□□□ -1.8
MTMR4-201ENST00000323456 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
MTMR4-201ENST00000323456 MT1BP07438 61 aa3.81□□□□□ -1.8
MTMR4-201ENST00000323456 MUC2Q02817 5179 aa3.79□□□□□ -1.8
MTMR4-201ENST00000323456 ABCA13Q86UQ4 5058 aa3.79□□□□□ -1.8
MTMR4-201ENST00000323456 PCLOQ9Y6V0 5065 aa3.78□□□□□ -1.81
MTMR4-201ENST00000323456 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
MTMR4-201ENST00000323456 KRTAP19-2Q3LHN2 52 aa3.73□□□□□ -1.81
MTMR4-201ENST00000323456 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
MTMR4-201ENST00000323456 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
MTMR4-201ENST00000323456 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
MTMR4-201ENST00000323456 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
MTMR4-201ENST00000323456 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
MTMR4-201ENST00000323456 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
MTMR4-201ENST00000323456 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
MTMR4-201ENST00000323456 MT1GP13640 62 aa3.62□□□□□ -1.83
MTMR4-201ENST00000323456 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
MTMR4-201ENST00000323456 LCE2BO14633 110 aa3.58□□□□□ -1.84
MTMR4-201ENST00000323456 SPRR2EP22531 72 aa3.58□□□□□ -1.84
MTMR4-201ENST00000323456 SPRR2BP35325 72 aa3.58□□□□□ -1.84
MTMR4-201ENST00000323456 SPRR2AP35326 72 aa3.58□□□□□ -1.84
MTMR4-201ENST00000323456 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
MTMR4-201ENST00000323456 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
MTMR4-201ENST00000323456 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
MTMR4-201ENST00000323456 HMCN2Q8NDA2 5059 aa3.48□□□□□ -1.85
MTMR4-201ENST00000323456 SPRR2DP22532 72 aa3.46□□□□□ -1.86
MTMR4-201ENST00000323456 MT1LQ93083 61 aa3.42□□□□□ -1.86
MTMR4-201ENST00000323456 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
MTMR4-201ENST00000323456 MT1EP04732 61 aa3.4□□□□□ -1.86
MTMR4-201ENST00000323456 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 423 ms