RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 RYR3Q15413 4870 aa6.56□□□□□ -1.36
NCL-201ENST00000322723 NDUFAF8A1L188 74 aa6.55□□□□□ -1.36
NCL-201ENST00000322723 RYR1P21817 5038 aa6.54□□□□□ -1.36
NCL-201ENST00000322723 SMR3BP02814 79 aaPredicted RBP6.53□□□□□ -1.36
NCL-201ENST00000322723 KRTAP10-8P60410 259 aa6.51□□□□□ -1.37
NCL-201ENST00000322723 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
NCL-201ENST00000322723 LRP1Q07954 4544 aaKnown RBP6.44□□□□□ -1.38
NCL-201ENST00000322723 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
NCL-201ENST00000322723 H0YAA0 97 aa6.4□□□□□ -1.38
NCL-201ENST00000322723 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
NCL-201ENST00000322723 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
NCL-201ENST00000322723 Q5VSD8 79 aa6.36□□□□□ -1.39
NCL-201ENST00000322723 RPL37P61927 97 aaKnown RBP6.36□□□□□ -1.39
NCL-201ENST00000322723 MT1HL1P0DM35 61 aa6.34□□□□□ -1.39
NCL-201ENST00000322723 A0A0A0MQY5 61 aa6.34□□□□□ -1.4
NCL-201ENST00000322723 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
NCL-201ENST00000322723 P0C880 135 aa6.28□□□□□ -1.4
NCL-201ENST00000322723 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
NCL-201ENST00000322723 XP32Q5T750 250 aa6.24□□□□□ -1.41
NCL-201ENST00000322723 KIAA1109Q2LD37 5005 aa6.24□□□□□ -1.41
NCL-201ENST00000322723 LUZP6Q538Z0 58 aa6.23□□□□□ -1.41
NCL-201ENST00000322723 MYCBP2O75592 4640 aa6.22□□□□□ -1.41
NCL-201ENST00000322723 KRTAP3-3Q9BYR6 98 aa6.16□□□□□ -1.42
NCL-201ENST00000322723 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
NCL-201ENST00000322723 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
NCL-201ENST00000322723 LPAP08519 4548 aa6.08□□□□□ -1.44
NCL-201ENST00000322723 S4R3F8 94 aa6.06□□□□□ -1.44
NCL-201ENST00000322723 ABCA13Q86UQ4 5058 aa6.05□□□□□ -1.44
NCL-201ENST00000322723 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
NCL-201ENST00000322723 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
NCL-201ENST00000322723 KRTAP10-6P60371 365 aaPredicted RBP6.03□□□□□ -1.44
NCL-201ENST00000322723 LRP2P98164 4655 aa6.02□□□□□ -1.45
NCL-201ENST00000322723 HERC2O95714 4834 aa6□□□□□ -1.45
NCL-201ENST00000322723 M0QZ58 72 aa5.92□□□□□ -1.46
NCL-201ENST00000322723 BIRC6Q9NR09 4857 aa5.92□□□□□ -1.46
NCL-201ENST00000322723 R4GN34 69 aa5.91□□□□□ -1.46
NCL-201ENST00000322723 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
NCL-201ENST00000322723 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
NCL-201ENST00000322723 KRTAP13-4Q3LI77 160 aa5.89□□□□□ -1.47
NCL-201ENST00000322723 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
NCL-201ENST00000322723 KRTAP12-2P59991 146 aa5.86□□□□□ -1.47
NCL-201ENST00000322723 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
NCL-201ENST00000322723 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
NCL-201ENST00000322723 SEC61BP60468 96 aaKnown RBP5.77□□□□□ -1.48
NCL-201ENST00000322723 FLGP20930 4061 aaPredicted RBP5.74□□□□□ -1.49
NCL-201ENST00000322723 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
NCL-201ENST00000322723 J3QL48 77 aa5.69□□□□□ -1.5
NCL-201ENST00000322723 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
NCL-201ENST00000322723 HERC1Q15751 4861 aa5.63□□□□□ -1.51
NCL-201ENST00000322723 PCLOQ9Y6V0 5065 aa5.62□□□□□ -1.51
NCL-201ENST00000322723 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
NCL-201ENST00000322723 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
NCL-201ENST00000322723 MUC2Q02817 5179 aa5.47□□□□□ -1.53
NCL-201ENST00000322723 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
NCL-201ENST00000322723 TNP1P09430 55 aa5.4□□□□□ -1.55
NCL-201ENST00000322723 RNF213Q63HN8 5207 aa5.3□□□□□ -1.56
NCL-201ENST00000322723 MT1HP80294 61 aa5.29□□□□□ -1.56
NCL-201ENST00000322723 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
NCL-201ENST00000322723 KRTAP19-1Q8IUB9 90 aa5.24□□□□□ -1.57
NCL-201ENST00000322723 M0R2T5 61 aa5.21□□□□□ -1.58
NCL-201ENST00000322723 KRTAP9-8Q9BYQ0 159 aa5.2□□□□□ -1.58
NCL-201ENST00000322723 FAT4Q6V0I7 4981 aa5.19□□□□□ -1.58
NCL-201ENST00000322723 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
NCL-201ENST00000322723 MT2AP02795 61 aa5.16□□□□□ -1.58
NCL-201ENST00000322723 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.58
NCL-201ENST00000322723 MT1FP04733 61 aa5.14□□□□□ -1.59
NCL-201ENST00000322723 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
NCL-201ENST00000322723 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
NCL-201ENST00000322723 MT1BP07438 61 aa5□□□□□ -1.61
NCL-201ENST00000322723 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
NCL-201ENST00000322723 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
NCL-201ENST00000322723 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
NCL-201ENST00000322723 MT1XP80297 61 aa4.91□□□□□ -1.62
NCL-201ENST00000322723 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.62
NCL-201ENST00000322723 INE1O15225 51 aa4.9□□□□□ -1.63
NCL-201ENST00000322723 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
NCL-201ENST00000322723 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
NCL-201ENST00000322723 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
NCL-201ENST00000322723 LCE2BO14633 110 aa4.77□□□□□ -1.65
NCL-201ENST00000322723 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
NCL-201ENST00000322723 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
NCL-201ENST00000322723 USH2AO75445 5202 aa4.64□□□□□ -1.67
NCL-201ENST00000322723 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
NCL-201ENST00000322723 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
NCL-201ENST00000322723 KMT2DO14686 5537 aa4.57□□□□□ -1.68
NCL-201ENST00000322723 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
NCL-201ENST00000322723 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
NCL-201ENST00000322723 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
NCL-201ENST00000322723 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
NCL-201ENST00000322723 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
NCL-201ENST00000322723 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
NCL-201ENST00000322723 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
NCL-201ENST00000322723 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
NCL-201ENST00000322723 LCE2DQ5TA82 110 aaPredicted RBP4.31□□□□□ -1.72
NCL-201ENST00000322723 CRCT1Q9UGL9 99 aa4.29□□□□□ -1.72
NCL-201ENST00000322723 MT1EP04732 61 aa4.27□□□□□ -1.73
NCL-201ENST00000322723 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
NCL-201ENST00000322723 MT1LQ93083 61 aa4.23□□□□□ -1.73
NCL-201ENST00000322723 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
NCL-201ENST00000322723 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms