RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 ROMO1P60602 79 aa13.06□□□□□ -0.32
SENP3-201ENST00000321337 K7ERS5 55 aa13.05□□□□□ -0.32
SENP3-201ENST00000321337 A0A1B0GVY2 172 aa13.04□□□□□ -0.32
SENP3-201ENST00000321337 A0A0D9SG42 100 aa13.02□□□□□ -0.33
SENP3-201ENST00000321337 KRTAP10-8P60410 259 aa12.97□□□□□ -0.33
SENP3-201ENST00000321337 KRTAP3-2Q9BYR7 98 aa12.96□□□□□ -0.33
SENP3-201ENST00000321337 TNXBP22105 4242 aa12.95□□□□□ -0.34
SENP3-201ENST00000321337 MYCBP2O75592 4640 aa12.93□□□□□ -0.34
SENP3-201ENST00000321337 RPL37P61927 97 aaKnown RBP12.92□□□□□ -0.34
SENP3-201ENST00000321337 P0C880 135 aa12.83□□□□□ -0.36
SENP3-201ENST00000321337 TPRXLQ17RH7 258 aa12.82□□□□□ -0.36
SENP3-201ENST00000321337 RYR2Q92736 4967 aa12.8□□□□□ -0.36
SENP3-201ENST00000321337 S4R3F8 94 aa12.79□□□□□ -0.36
SENP3-201ENST00000321337 C10orf95Q9H7T3 257 aa12.76□□□□□ -0.37
SENP3-201ENST00000321337 XP32Q5T750 250 aa12.75□□□□□ -0.37
SENP3-201ENST00000321337 KMT2CQ8NEZ4 4911 aaKnown RBP12.71□□□□□ -0.37
SENP3-201ENST00000321337 KRTAP12-2P59991 146 aa12.65□□□□□ -0.38
SENP3-201ENST00000321337 LPAP08519 4548 aa12.65□□□□□ -0.38
SENP3-201ENST00000321337 SPINT4Q6UDR6 99 aa12.55□□□□□ -0.4
SENP3-201ENST00000321337 Q5VSD8 79 aa12.53□□□□□ -0.4
SENP3-201ENST00000321337 KRTAP17-1Q9BYP8 105 aa12.52□□□□□ -0.41
SENP3-201ENST00000321337 KRTAP12-1P59990 96 aa12.48□□□□□ -0.41
SENP3-201ENST00000321337 LRP2P98164 4655 aa12.4□□□□□ -0.42
SENP3-201ENST00000321337 RYR1P21817 5038 aa12.36□□□□□ -0.43
SENP3-201ENST00000321337 KRTAP15-1Q3LI76 137 aa12.3□□□□□ -0.44
SENP3-201ENST00000321337 MT1HL1P0DM35 61 aa12.29□□□□□ -0.44
SENP3-201ENST00000321337 KIAA1109Q2LD37 5005 aa12.25□□□□□ -0.45
SENP3-201ENST00000321337 RYR3Q15413 4870 aa12.22□□□□□ -0.45
SENP3-201ENST00000321337 KRTAP21-3Q3LHN1 58 aa12.22□□□□□ -0.45
SENP3-201ENST00000321337 NDUFAF8A1L188 74 aa12.19□□□□□ -0.46
SENP3-201ENST00000321337 M0QZ58 72 aa12.15□□□□□ -0.46
SENP3-201ENST00000321337 ABCA13Q86UQ4 5058 aa12.06□□□□□ -0.48
SENP3-201ENST00000321337 LORP23490 312 aaPredicted RBP11.93□□□□□ -0.5
SENP3-201ENST00000321337 R4GN34 69 aa11.9□□□□□ -0.5
SENP3-201ENST00000321337 EPPK1P58107 5090 aaKnown RBP11.8□□□□□ -0.52
SENP3-201ENST00000321337 MUC17Q685J3 4493 aa11.78□□□□□ -0.52
SENP3-201ENST00000321337 KRTAP4-1Q9BYQ7 146 aa11.68□□□□□ -0.54
SENP3-201ENST00000321337 KRTAP4-5Q9BYR2 181 aa11.68□□□□□ -0.54
SENP3-201ENST00000321337 PLAC4Q8WY50 150 aa11.57□□□□□ -0.56
SENP3-201ENST00000321337 SEC61BP60468 96 aaKnown RBP11.49□□□□□ -0.57
SENP3-201ENST00000321337 KRTAP19-2Q3LHN2 52 aa11.43□□□□□ -0.58
SENP3-201ENST00000321337 MUC2Q02817 5179 aa11.4□□□□□ -0.58
SENP3-201ENST00000321337 CAMK2N1Q7Z7J9 78 aa11.35□□□□□ -0.59
SENP3-201ENST00000321337 PP632Q6XCG6 107 aa11.17□□□□□ -0.62
SENP3-201ENST00000321337 A0A0A0MQY5 61 aa11.12□□□□□ -0.63
SENP3-201ENST00000321337 HERC2O95714 4834 aa11.11□□□□□ -0.63
SENP3-201ENST00000321337 J3QL48 77 aa11.1□□□□□ -0.63
SENP3-201ENST00000321337 FLGP20930 4061 aaPredicted RBP11.1□□□□□ -0.63
SENP3-201ENST00000321337 PCLOQ9Y6V0 5065 aa11.04□□□□□ -0.64
SENP3-201ENST00000321337 LUZP6Q538Z0 58 aa11.02□□□□□ -0.65
SENP3-201ENST00000321337 TNP1P09430 55 aa10.9□□□□□ -0.66
SENP3-201ENST00000321337 BIRC6Q9NR09 4857 aa10.88□□□□□ -0.67
SENP3-201ENST00000321337 HERC1Q15751 4861 aa10.87□□□□□ -0.67
SENP3-201ENST00000321337 FAT4Q6V0I7 4981 aa10.79□□□□□ -0.68
SENP3-201ENST00000321337 SPRR5A0A1B0GTR4 108 aa10.68□□□□□ -0.7
SENP3-201ENST00000321337 KRTAP23-1A1A580 65 aa10.66□□□□□ -0.7
SENP3-201ENST00000321337 LCE2CQ5TA81 110 aa10.6□□□□□ -0.71
SENP3-201ENST00000321337 KRTAP19-1Q8IUB9 90 aa10.57□□□□□ -0.72
SENP3-201ENST00000321337 HMCN2Q8NDA2 5059 aa10.54□□□□□ -0.72
SENP3-201ENST00000321337 SPRR2GQ9BYE4 73 aa10.52□□□□□ -0.73
SENP3-201ENST00000321337 LCE3AQ5TA76 89 aa10.45□□□□□ -0.74
SENP3-201ENST00000321337 RNF213Q63HN8 5207 aa10.36□□□□□ -0.75
SENP3-201ENST00000321337 M0R2T5 61 aa10.33□□□□□ -0.76
SENP3-201ENST00000321337 UBR4Q5T4S7 5183 aa10.29□□□□□ -0.76
SENP3-201ENST00000321337 MT1FP04733 61 aa10.26□□□□□ -0.77
SENP3-201ENST00000321337 MT1HP80294 61 aa10.25□□□□□ -0.77
SENP3-201ENST00000321337 MT2AP02795 61 aa10.2□□□□□ -0.78
SENP3-201ENST00000321337 KRTAP10-10P60014 251 aa10.2□□□□□ -0.78
SENP3-201ENST00000321337 KRTAP9-8Q9BYQ0 159 aa10.09□□□□□ -0.79
SENP3-201ENST00000321337 KRTAP8-1Q8IUC2 63 aa10.05□□□□□ -0.8
SENP3-201ENST00000321337 KRTAP10-5P60370 271 aa10.01□□□□□ -0.81
SENP3-201ENST00000321337 MT1XP80297 61 aa9.98□□□□□ -0.81
SENP3-201ENST00000321337 KRTAP19-8Q3LI54 63 aa9.97□□□□□ -0.81
SENP3-201ENST00000321337 MT1BP07438 61 aa9.97□□□□□ -0.81
SENP3-201ENST00000321337 KRTAP12-3P60328 96 aa9.86□□□□□ -0.83
SENP3-201ENST00000321337 KRTAP10-12P60413 245 aa9.83□□□□□ -0.84
SENP3-201ENST00000321337 KRTAP10-7P60409 375 aaPredicted RBP9.81□□□□□ -0.84
SENP3-201ENST00000321337 PRO2289Q9P1D8 64 aa9.67□□□□□ -0.86
SENP3-201ENST00000321337 KRTAP9-3Q9BYQ3 159 aa9.62□□□□□ -0.87
SENP3-201ENST00000321337 INE1O15225 51 aa9.52□□□□□ -0.88
SENP3-201ENST00000321337 KMT2DO14686 5537 aa9.47□□□□□ -0.89
SENP3-201ENST00000321337 KRTAP19-5Q3LI72 72 aa9.42□□□□□ -0.9
SENP3-201ENST00000321337 USH2AO75445 5202 aa9.42□□□□□ -0.9
SENP3-201ENST00000321337 LCE3CQ5T5A8 94 aa9.29□□□□□ -0.92
SENP3-201ENST00000321337 LCE2BO14633 110 aa9.27□□□□□ -0.93
SENP3-201ENST00000321337 KRTAP4-8A0A0G2JLE6 195 aa9.2□□□□□ -0.94
SENP3-201ENST00000321337 KRTAP4-8Q9BYQ9 185 aa9.2□□□□□ -0.94
SENP3-201ENST00000321337 KRTAP9-6A8MVA2 160 aa9.17□□□□□ -0.94
SENP3-201ENST00000321337 KRTAP4-7Q9BYR0 210 aa9.01□□□□□ -0.97
SENP3-201ENST00000321337 KRTAP19-7Q3SYF9 63 aa8.9□□□□□ -0.98
SENP3-201ENST00000321337 KRTAP2-3P0C7H8 128 aa8.79□□□□□ -1
SENP3-201ENST00000321337 KRTAP2-4Q9BYR9 128 aa8.79□□□□□ -1
SENP3-201ENST00000321337 KRTAP2-1Q9BYU5 128 aa8.79□□□□□ -1
SENP3-201ENST00000321337 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
SENP3-201ENST00000321337 MT1LQ93083 61 aa8.63□□□□□ -1.03
SENP3-201ENST00000321337 MT1EP04732 61 aa8.57□□□□□ -1.04
SENP3-201ENST00000321337 SSPOA2VEC9 5147 aa8.44□□□□□ -1.06
SENP3-201ENST00000321337 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
SENP3-201ENST00000321337 KRTAP4-3Q9BYR4 195 aa8.35□□□□□ -1.07
SENP3-201ENST00000321337 KRTAP19-4Q3LI73 84 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms