RNA–Protein interactions for RNA: ENST00000319359.7

ELL3-201, Transcript of elongation factor for RNA polymerase II 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELL3, Length 2,352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-201ENST00000319359 KRTAP10-6P60371 365 aaPredicted RBP11.2□□□□□ -0.62
ELL3-201ENST00000319359 H3BS24 57 aa11.18□□□□□ -0.62
ELL3-201ENST00000319359 K7ERS5 55 aa11.18□□□□□ -0.62
ELL3-201ENST00000319359 TNXBP22105 4242 aa11.17□□□□□ -0.62
ELL3-201ENST00000319359 A0A0D9SG42 100 aa11.17□□□□□ -0.62
ELL3-201ENST00000319359 KRTAP10-8P60410 259 aa11.16□□□□□ -0.62
ELL3-201ENST00000319359 ROMO1P60602 79 aa11.12□□□□□ -0.63
ELL3-201ENST00000319359 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
ELL3-201ENST00000319359 RYR2Q92736 4967 aa11.11□□□□□ -0.63
ELL3-201ENST00000319359 KMT2CQ8NEZ4 4911 aaKnown RBP11.08□□□□□ -0.64
ELL3-201ENST00000319359 RPL37P61927 97 aaKnown RBP11.06□□□□□ -0.64
ELL3-201ENST00000319359 P0C880 135 aa11.01□□□□□ -0.65
ELL3-201ENST00000319359 S4R3F8 94 aa10.99□□□□□ -0.65
ELL3-201ENST00000319359 XP32Q5T750 250 aa10.99□□□□□ -0.65
ELL3-201ENST00000319359 LPAP08519 4548 aa10.95□□□□□ -0.66
ELL3-201ENST00000319359 TPRXLQ17RH7 258 aa10.95□□□□□ -0.66
ELL3-201ENST00000319359 C10orf95Q9H7T3 257 aa10.92□□□□□ -0.66
ELL3-201ENST00000319359 KRTAP12-2P59991 146 aa10.85□□□□□ -0.67
ELL3-201ENST00000319359 Q5VSD8 79 aa10.84□□□□□ -0.67
ELL3-201ENST00000319359 KRTAP17-1Q9BYP8 105 aa10.82□□□□□ -0.68
ELL3-201ENST00000319359 LRP2P98164 4655 aa10.73□□□□□ -0.69
ELL3-201ENST00000319359 SPINT4Q6UDR6 99 aa10.73□□□□□ -0.69
ELL3-201ENST00000319359 RYR1P21817 5038 aa10.69□□□□□ -0.7
ELL3-201ENST00000319359 KRTAP12-1P59990 96 aa10.69□□□□□ -0.7
ELL3-201ENST00000319359 RYR3Q15413 4870 aa10.66□□□□□ -0.7
ELL3-201ENST00000319359 KIAA1109Q2LD37 5005 aa10.64□□□□□ -0.71
ELL3-201ENST00000319359 KRTAP21-3Q3LHN1 58 aa10.62□□□□□ -0.71
ELL3-201ENST00000319359 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
ELL3-201ENST00000319359 KRTAP15-1Q3LI76 137 aa10.48□□□□□ -0.73
ELL3-201ENST00000319359 ABCA13Q86UQ4 5058 aa10.46□□□□□ -0.74
ELL3-201ENST00000319359 M0QZ58 72 aa10.42□□□□□ -0.74
ELL3-201ENST00000319359 NDUFAF8A1L188 74 aa10.39□□□□□ -0.75
ELL3-201ENST00000319359 EPPK1P58107 5090 aaKnown RBP10.28□□□□□ -0.76
ELL3-201ENST00000319359 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
ELL3-201ENST00000319359 R4GN34 69 aa10.24□□□□□ -0.77
ELL3-201ENST00000319359 MUC17Q685J3 4493 aa10.17□□□□□ -0.78
ELL3-201ENST00000319359 KRTAP4-5Q9BYR2 181 aa10.12□□□□□ -0.79
ELL3-201ENST00000319359 KRTAP4-1Q9BYQ7 146 aa10.08□□□□□ -0.8
ELL3-201ENST00000319359 MUC2Q02817 5179 aa9.92□□□□□ -0.82
ELL3-201ENST00000319359 SEC61BP60468 96 aaKnown RBP9.92□□□□□ -0.82
ELL3-201ENST00000319359 PLAC4Q8WY50 150 aa9.89□□□□□ -0.83
ELL3-201ENST00000319359 KRTAP19-2Q3LHN2 52 aa9.83□□□□□ -0.84
ELL3-201ENST00000319359 CAMK2N1Q7Z7J9 78 aa9.77□□□□□ -0.85
ELL3-201ENST00000319359 HERC2O95714 4834 aa9.67□□□□□ -0.86
ELL3-201ENST00000319359 J3QL48 77 aa9.64□□□□□ -0.87
ELL3-201ENST00000319359 PCLOQ9Y6V0 5065 aa9.57□□□□□ -0.88
ELL3-201ENST00000319359 PP632Q6XCG6 107 aa9.56□□□□□ -0.88
ELL3-201ENST00000319359 FLGP20930 4061 aaPredicted RBP9.55□□□□□ -0.88
ELL3-201ENST00000319359 BIRC6Q9NR09 4857 aa9.43□□□□□ -0.9
ELL3-201ENST00000319359 LUZP6Q538Z0 58 aa9.41□□□□□ -0.9
ELL3-201ENST00000319359 FAT4Q6V0I7 4981 aa9.41□□□□□ -0.9
ELL3-201ENST00000319359 TNP1P09430 55 aa9.36□□□□□ -0.91
ELL3-201ENST00000319359 HERC1Q15751 4861 aa9.34□□□□□ -0.91
ELL3-201ENST00000319359 HMCN2Q8NDA2 5059 aa9.17□□□□□ -0.94
ELL3-201ENST00000319359 LCE2CQ5TA81 110 aa9.15□□□□□ -0.95
ELL3-201ENST00000319359 KRTAP23-1A1A580 65 aa9.12□□□□□ -0.95
ELL3-201ENST00000319359 SPRR5A0A1B0GTR4 108 aa9.1□□□□□ -0.95
ELL3-201ENST00000319359 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
ELL3-201ENST00000319359 A0A0A0MQY5 61 aa9.06□□□□□ -0.96
ELL3-201ENST00000319359 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
ELL3-201ENST00000319359 RNF213Q63HN8 5207 aa9.02□□□□□ -0.97
ELL3-201ENST00000319359 LCE3AQ5TA76 89 aa8.98□□□□□ -0.97
ELL3-201ENST00000319359 M0R2T5 61 aa8.96□□□□□ -0.98
ELL3-201ENST00000319359 UBR4Q5T4S7 5183 aa8.89□□□□□ -0.99
ELL3-201ENST00000319359 MT1FP04733 61 aa8.86□□□□□ -0.99
ELL3-201ENST00000319359 MT1HP80294 61 aa8.86□□□□□ -0.99
ELL3-201ENST00000319359 KRTAP10-10P60014 251 aa8.81□□□□□ -1
ELL3-201ENST00000319359 MT2AP02795 61 aa8.8□□□□□ -1
ELL3-201ENST00000319359 KRTAP9-8Q9BYQ0 159 aa8.7□□□□□ -1.02
ELL3-201ENST00000319359 KRTAP10-5P60370 271 aa8.62□□□□□ -1.03
ELL3-201ENST00000319359 KRTAP8-1Q8IUC2 63 aa8.61□□□□□ -1.03
ELL3-201ENST00000319359 MT1XP80297 61 aa8.59□□□□□ -1.03
ELL3-201ENST00000319359 MT1BP07438 61 aa8.58□□□□□ -1.04
ELL3-201ENST00000319359 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
ELL3-201ENST00000319359 KRTAP12-3P60328 96 aa8.46□□□□□ -1.06
ELL3-201ENST00000319359 KRTAP10-12P60413 245 aa8.46□□□□□ -1.06
ELL3-201ENST00000319359 KRTAP10-7P60409 375 aaPredicted RBP8.45□□□□□ -1.06
ELL3-201ENST00000319359 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
ELL3-201ENST00000319359 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.09
ELL3-201ENST00000319359 USH2AO75445 5202 aa8.19□□□□□ -1.1
ELL3-201ENST00000319359 KMT2DO14686 5537 aa8.19□□□□□ -1.1
ELL3-201ENST00000319359 INE1O15225 51 aa8.1□□□□□ -1.11
ELL3-201ENST00000319359 KRTAP19-5Q3LI72 72 aa8.1□□□□□ -1.11
ELL3-201ENST00000319359 LCE2BO14633 110 aa8□□□□□ -1.13
ELL3-201ENST00000319359 LCE3CQ5T5A8 94 aa7.98□□□□□ -1.13
ELL3-201ENST00000319359 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
ELL3-201ENST00000319359 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
ELL3-201ENST00000319359 KRTAP9-6A8MVA2 160 aa7.86□□□□□ -1.15
ELL3-201ENST00000319359 KRTAP4-7Q9BYR0 210 aa7.76□□□□□ -1.17
ELL3-201ENST00000319359 KRTAP19-7Q3SYF9 63 aa7.66□□□□□ -1.18
ELL3-201ENST00000319359 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
ELL3-201ENST00000319359 KRTAP2-3P0C7H8 128 aa7.51□□□□□ -1.21
ELL3-201ENST00000319359 KRTAP2-4Q9BYR9 128 aa7.51□□□□□ -1.21
ELL3-201ENST00000319359 KRTAP2-1Q9BYU5 128 aa7.51□□□□□ -1.21
ELL3-201ENST00000319359 MT1LQ93083 61 aa7.42□□□□□ -1.22
ELL3-201ENST00000319359 MT1EP04732 61 aa7.38□□□□□ -1.23
ELL3-201ENST00000319359 SSPOA2VEC9 5147 aa7.33□□□□□ -1.24
ELL3-201ENST00000319359 FSIP2Q5CZC0 6907 aa7.29□□□□□ -1.24
ELL3-201ENST00000319359 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
ELL3-201ENST00000319359 KRTAP4-3Q9BYR4 195 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms