RNA–Protein interactions for RNA: ENST00000317623.8

PCNX4-201, Transcript of pecanex 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCNX4, Length 17,339 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-201ENST00000317623 DNAH2Q9P225 4427 aa2.8□□□□□ -1.96
PCNX4-201ENST00000317623 MUC3AQ02505 3323 aa2.79□□□□□ -1.96
PCNX4-201ENST00000317623 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
PCNX4-201ENST00000317623 DNAH1Q9P2D7 4330 aa2.78□□□□□ -1.96
PCNX4-201ENST00000317623 DNAH7Q8WXX0 4024 aa2.77□□□□□ -1.97
PCNX4-201ENST00000317623 KRTAP10-5P60370 271 aa2.76□□□□□ -1.97
PCNX4-201ENST00000317623 ZNF469Q96JG9 3925 aaPredicted RBP2.75□□□□□ -1.97
PCNX4-201ENST00000317623 ANK3Q12955 4377 aaKnown RBP2.7□□□□□ -1.98
PCNX4-201ENST00000317623 KMT2AQ03164 3969 aa2.69□□□□□ -1.98
PCNX4-201ENST00000317623 LORP23490 312 aaPredicted RBP2.69□□□□□ -1.98
PCNX4-201ENST00000317623 CSMD2Q7Z408 3487 aa2.69□□□□□ -1.98
PCNX4-201ENST00000317623 MT1HL1P0DM35 61 aa2.68□□□□□ -1.98
PCNX4-201ENST00000317623 HUWE1Q7Z6Z7 4374 aaKnown RBP2.67□□□□□ -1.98
PCNX4-201ENST00000317623 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
PCNX4-201ENST00000317623 VPS13BQ7Z7G8 4022 aa2.62□□□□□ -1.99
PCNX4-201ENST00000317623 DNAH11Q96DT5 4516 aa2.61□□□□□ -1.99
PCNX4-201ENST00000317623 KRTAP10-4P60372 401 aaPredicted RBP2.6□□□□□ -1.99
PCNX4-201ENST00000317623 FRAS1Q86XX4 4008 aa2.58□□□□□ -2
PCNX4-201ENST00000317623 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
PCNX4-201ENST00000317623 DNAH10Q8IVF4 4471 aa2.55□□□□□ -2
PCNX4-201ENST00000317623 VPS13DQ5THJ4 4388 aa2.54□□□□□ -2
PCNX4-201ENST00000317623 PRKDCP78527 4128 aaKnown RBP2.54□□□□□ -2
PCNX4-201ENST00000317623 FLGP20930 4061 aaPredicted RBP2.53□□□□□ -2.01
PCNX4-201ENST00000317623 KRTAP19-5Q3LI72 72 aa2.51□□□□□ -2.01
PCNX4-201ENST00000317623 KRTAP8-1Q8IUC2 63 aa2.51□□□□□ -2.01
PCNX4-201ENST00000317623 DNAH17Q9UFH2 4485 aa2.48□□□□□ -2.01
PCNX4-201ENST00000317623 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
PCNX4-201ENST00000317623 STARD9Q9P2P6 4700 aa2.47□□□□□ -2.01
PCNX4-201ENST00000317623 DNAH8Q96JB1 4490 aa2.47□□□□□ -2.01
PCNX4-201ENST00000317623 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
PCNX4-201ENST00000317623 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
PCNX4-201ENST00000317623 KRTAP4-5Q9BYR2 181 aa2.43□□□□□ -2.02
PCNX4-201ENST00000317623 PKHD1P08F94 4074 aa2.41□□□□□ -2.02
PCNX4-201ENST00000317623 LRP1Q07954 4544 aaKnown RBP2.4□□□□□ -2.03
PCNX4-201ENST00000317623 KRTAP4-1Q9BYQ7 146 aa2.4□□□□□ -2.03
PCNX4-201ENST00000317623 FAT2Q9NYQ8 4349 aa2.39□□□□□ -2.03
PCNX4-201ENST00000317623 DYNC2H1Q8NCM8 4307 aaKnown RBP2.38□□□□□ -2.03
PCNX4-201ENST00000317623 KRTAP10-7P60409 375 aaPredicted RBP2.38□□□□□ -2.03
PCNX4-201ENST00000317623 DNAH9Q9NYC9 4486 aa2.36□□□□□ -2.03
PCNX4-201ENST00000317623 MT2AP02795 61 aa2.35□□□□□ -2.03
PCNX4-201ENST00000317623 PLECQ15149 4684 aaKnown RBP2.35□□□□□ -2.03
PCNX4-201ENST00000317623 PKHD1L1Q86WI1 4243 aa2.34□□□□□ -2.03
PCNX4-201ENST00000317623 RYR1P21817 5038 aa2.34□□□□□ -2.03
PCNX4-201ENST00000317623 LCE3BQ5TA77 95 aa2.33□□□□□ -2.04
PCNX4-201ENST00000317623 MT1HP80294 61 aa2.31□□□□□ -2.04
PCNX4-201ENST00000317623 RYR2Q92736 4967 aa2.31□□□□□ -2.04
PCNX4-201ENST00000317623 MT1FP04733 61 aa2.3□□□□□ -2.04
PCNX4-201ENST00000317623 PKD1P98161 4303 aa2.28□□□□□ -2.04
PCNX4-201ENST00000317623 BIRC6Q9NR09 4857 aa2.26□□□□□ -2.05
PCNX4-201ENST00000317623 RYR3Q15413 4870 aa2.26□□□□□ -2.05
PCNX4-201ENST00000317623 DNAH5Q8TE73 4624 aa2.26□□□□□ -2.05
PCNX4-201ENST00000317623 MT1XP80297 61 aa2.25□□□□□ -2.05
PCNX4-201ENST00000317623 SPRR2FQ96RM1 72 aa2.24□□□□□ -2.05
PCNX4-201ENST00000317623 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
PCNX4-201ENST00000317623 FAT1Q14517 4588 aa2.24□□□□□ -2.05
PCNX4-201ENST00000317623 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
PCNX4-201ENST00000317623 HSPG2P98160 4391 aa2.23□□□□□ -2.05
PCNX4-201ENST00000317623 TNXBP22105 4242 aa2.23□□□□□ -2.05
PCNX4-201ENST00000317623 SACSQ9NZJ4 4579 aa2.23□□□□□ -2.05
PCNX4-201ENST00000317623 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
PCNX4-201ENST00000317623 KRTAP19-1Q8IUB9 90 aa2.22□□□□□ -2.05
PCNX4-201ENST00000317623 MT1GP13640 62 aa2.22□□□□□ -2.05
PCNX4-201ENST00000317623 DNHD1Q96M86 4753 aa2.21□□□□□ -2.05
PCNX4-201ENST00000317623 APOBP04114 4563 aaKnown RBP2.19□□□□□ -2.06
PCNX4-201ENST00000317623 DYNC1H1Q14204 4646 aaKnown RBP2.18□□□□□ -2.06
PCNX4-201ENST00000317623 MT3P25713 68 aa2.16□□□□□ -2.06
PCNX4-201ENST00000317623 PRM1P04553 51 aa2.16□□□□□ -2.06
PCNX4-201ENST00000317623 HERC2O95714 4834 aa2.15□□□□□ -2.07
PCNX4-201ENST00000317623 HERC1Q15751 4861 aa2.13□□□□□ -2.07
PCNX4-201ENST00000317623 LRP1BQ9NZR2 4599 aa2.11□□□□□ -2.07
PCNX4-201ENST00000317623 FAT3Q8TDW7 4589 aa2.1□□□□□ -2.07
PCNX4-201ENST00000317623 MT1LQ93083 61 aa2.1□□□□□ -2.07
PCNX4-201ENST00000317623 KMT2CQ8NEZ4 4911 aaKnown RBP2.1□□□□□ -2.07
PCNX4-201ENST00000317623 MT1BP07438 61 aa2.1□□□□□ -2.07
PCNX4-201ENST00000317623 PCLOQ9Y6V0 5065 aa2.09□□□□□ -2.07
PCNX4-201ENST00000317623 NEBP20929 6669 aa2.09□□□□□ -2.08
PCNX4-201ENST00000317623 LCE2CQ5TA81 110 aa2.08□□□□□ -2.08
PCNX4-201ENST00000317623 MYCBP2O75592 4640 aa2.07□□□□□ -2.08
PCNX4-201ENST00000317623 SPRR2EP22531 72 aa2.06□□□□□ -2.08
PCNX4-201ENST00000317623 SPRR2BP35325 72 aa2.06□□□□□ -2.08
PCNX4-201ENST00000317623 SPRR2AP35326 72 aa2.06□□□□□ -2.08
PCNX4-201ENST00000317623 KRTAP4-8A0A0G2JLE6 195 aa2.06□□□□□ -2.08
PCNX4-201ENST00000317623 KRTAP4-8Q9BYQ9 185 aa2.06□□□□□ -2.08
PCNX4-201ENST00000317623 HYDINQ4G0P3 5121 aa2.05□□□□□ -2.08
PCNX4-201ENST00000317623 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
PCNX4-201ENST00000317623 KRTAP4-7Q9BYR0 210 aa2.04□□□□□ -2.08
PCNX4-201ENST00000317623 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
PCNX4-201ENST00000317623 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
PCNX4-201ENST00000317623 KRTAP9-8Q9BYQ0 159 aa2.04□□□□□ -2.08
PCNX4-201ENST00000317623 KRTAP9-6A0A140TA67 174 aa2.03□□□□□ -2.08
PCNX4-201ENST00000317623 LCE2BO14633 110 aa2.03□□□□□ -2.08
PCNX4-201ENST00000317623 KRTAP9-3Q9BYQ3 159 aa2.03□□□□□ -2.09
PCNX4-201ENST00000317623 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
PCNX4-201ENST00000317623 MT1EP04732 61 aa2.01□□□□□ -2.09
PCNX4-201ENST00000317623 SYNE2Q8WXH0 6885 aaKnown RBP1.99□□□□□ -2.09
PCNX4-201ENST00000317623 SPRR2DP22532 72 aa1.99□□□□□ -2.09
PCNX4-201ENST00000317623 LOC100996750A0A140TA64 210 aa1.98□□□□□ -2.09
PCNX4-201ENST00000317623 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
PCNX4-201ENST00000317623 MT1MQ8N339 61 aa1.93□□□□□ -2.1
PCNX4-201ENST00000317623 LCE2DQ5TA82 110 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms