RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 KMT2AQ03164 3969 aa1.46□□□□□ -2.18
CLOCK-201ENST00000309964 ABCA13Q86UQ4 5058 aa1.46□□□□□ -2.18
CLOCK-201ENST00000309964 KRTAP10-12P60413 245 aa1.46□□□□□ -2.18
CLOCK-201ENST00000309964 LCE2DQ5TA82 110 aaPredicted RBP1.46□□□□□ -2.18
CLOCK-201ENST00000309964 ALMS1Q8TCU4 4167 aa1.46□□□□□ -2.18
CLOCK-201ENST00000309964 LYSTQ99698 3801 aa1.45□□□□□ -2.18
CLOCK-201ENST00000309964 MT3P25713 68 aa1.45□□□□□ -2.18
CLOCK-201ENST00000309964 CMYA5Q8N3K9 4069 aa1.44□□□□□ -2.18
CLOCK-201ENST00000309964 KRTAP3-1Q9BYR8 98 aa1.43□□□□□ -2.18
CLOCK-201ENST00000309964 KIAA1109Q2LD37 5005 aa1.43□□□□□ -2.18
CLOCK-201ENST00000309964 KRTAP10-6P60371 365 aaPredicted RBP1.43□□□□□ -2.18
CLOCK-201ENST00000309964 PRKDCP78527 4128 aaKnown RBP1.42□□□□□ -2.18
CLOCK-201ENST00000309964 RYR2Q92736 4967 aa1.42□□□□□ -2.18
CLOCK-201ENST00000309964 KRTAP10-4P60372 401 aaPredicted RBP1.42□□□□□ -2.18
CLOCK-201ENST00000309964 DNAH7Q8WXX0 4024 aa1.41□□□□□ -2.18
CLOCK-201ENST00000309964 DNAH3Q8TD57 4116 aa1.41□□□□□ -2.18
CLOCK-201ENST00000309964 FRAS1Q86XX4 4008 aa1.41□□□□□ -2.18
CLOCK-201ENST00000309964 HMCN2Q8NDA2 5059 aa1.4□□□□□ -2.19
CLOCK-201ENST00000309964 DNAH9Q9NYC9 4486 aa1.4□□□□□ -2.19
CLOCK-201ENST00000309964 KRTAP12-3P60328 96 aa1.39□□□□□ -2.19
CLOCK-201ENST00000309964 DNAH2Q9P225 4427 aa1.39□□□□□ -2.19
CLOCK-201ENST00000309964 KRTAP8-1Q8IUC2 63 aa1.37□□□□□ -2.19
CLOCK-201ENST00000309964 KRTAP3-3Q9BYR6 98 aa1.37□□□□□ -2.19
CLOCK-201ENST00000309964 DNAH6Q9C0G6 4158 aa1.37□□□□□ -2.19
CLOCK-201ENST00000309964 HECTD4Q9Y4D8 3996 aa1.37□□□□□ -2.19
CLOCK-201ENST00000309964 LCE2AQ5TA79 106 aaPredicted RBP1.36□□□□□ -2.19
CLOCK-201ENST00000309964 FAT2Q9NYQ8 4349 aa1.36□□□□□ -2.19
CLOCK-201ENST00000309964 SPRR2GQ9BYE4 73 aa1.35□□□□□ -2.19
CLOCK-201ENST00000309964 KRTAP3-2Q9BYR7 98 aa1.35□□□□□ -2.19
CLOCK-201ENST00000309964 SPRR5A0A1B0GTR4 108 aa1.34□□□□□ -2.19
CLOCK-201ENST00000309964 KRTAP17-1Q9BYP8 105 aa1.34□□□□□ -2.2
CLOCK-201ENST00000309964 DYNC2H1Q8NCM8 4307 aaKnown RBP1.33□□□□□ -2.2
CLOCK-201ENST00000309964 DNAH17Q9UFH2 4485 aa1.32□□□□□ -2.2
CLOCK-201ENST00000309964 KRTAP10-7P60409 375 aaPredicted RBP1.32□□□□□ -2.2
CLOCK-201ENST00000309964 EPPK1P58107 5090 aaKnown RBP1.32□□□□□ -2.2
CLOCK-201ENST00000309964 FAT4Q6V0I7 4981 aa1.32□□□□□ -2.2
CLOCK-201ENST00000309964 KRTAP4-5Q9BYR2 181 aa1.32□□□□□ -2.2
CLOCK-201ENST00000309964 PKHD1P08F94 4074 aa1.31□□□□□ -2.2
CLOCK-201ENST00000309964 VPS13DQ5THJ4 4388 aa1.3□□□□□ -2.2
CLOCK-201ENST00000309964 DNAH10Q8IVF4 4471 aa1.3□□□□□ -2.2
CLOCK-201ENST00000309964 SSPOA2VEC9 5147 aa1.29□□□□□ -2.2
CLOCK-201ENST00000309964 MT1HP80294 61 aa1.29□□□□□ -2.2
CLOCK-201ENST00000309964 PLECQ15149 4684 aaKnown RBP1.29□□□□□ -2.2
CLOCK-201ENST00000309964 DNAH5Q8TE73 4624 aa1.29□□□□□ -2.2
CLOCK-201ENST00000309964 RYR3Q15413 4870 aa1.29□□□□□ -2.2
CLOCK-201ENST00000309964 LCE3AQ5TA76 89 aa1.28□□□□□ -2.2
CLOCK-201ENST00000309964 STARD9Q9P2P6 4700 aa1.28□□□□□ -2.2
CLOCK-201ENST00000309964 DNAH8Q96JB1 4490 aa1.28□□□□□ -2.2
CLOCK-201ENST00000309964 CRCT1Q9UGL9 99 aa1.28□□□□□ -2.21
CLOCK-201ENST00000309964 RNF213Q63HN8 5207 aa1.27□□□□□ -2.21
CLOCK-201ENST00000309964 MUC2Q02817 5179 aa1.27□□□□□ -2.21
CLOCK-201ENST00000309964 DNAH11Q96DT5 4516 aa1.27□□□□□ -2.21
CLOCK-201ENST00000309964 FLGP20930 4061 aaPredicted RBP1.27□□□□□ -2.21
CLOCK-201ENST00000309964 LRP1BQ9NZR2 4599 aa1.27□□□□□ -2.21
CLOCK-201ENST00000309964 USH2AO75445 5202 aa1.26□□□□□ -2.21
CLOCK-201ENST00000309964 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
CLOCK-201ENST00000309964 MT2AP02795 61 aa1.24□□□□□ -2.21
CLOCK-201ENST00000309964 LORP23490 312 aaPredicted RBP1.24□□□□□ -2.21
CLOCK-201ENST00000309964 KRTAP12-4P60329 112 aa1.23□□□□□ -2.21
CLOCK-201ENST00000309964 KRTAP10-5P60370 271 aa1.23□□□□□ -2.21
CLOCK-201ENST00000309964 KRTAP19-8Q3LI54 63 aa1.22□□□□□ -2.21
CLOCK-201ENST00000309964 FAT3Q8TDW7 4589 aa1.22□□□□□ -2.21
CLOCK-201ENST00000309964 LCE3CQ5T5A8 94 aa1.21□□□□□ -2.22
CLOCK-201ENST00000309964 PKHD1L1Q86WI1 4243 aa1.21□□□□□ -2.22
CLOCK-201ENST00000309964 FAT1Q14517 4588 aa1.21□□□□□ -2.22
CLOCK-201ENST00000309964 KMT2CQ8NEZ4 4911 aaKnown RBP1.2□□□□□ -2.22
CLOCK-201ENST00000309964 LCE2BO14633 110 aa1.19□□□□□ -2.22
CLOCK-201ENST00000309964 APOBP04114 4563 aaKnown RBP1.19□□□□□ -2.22
CLOCK-201ENST00000309964 MT1GP13640 62 aa1.19□□□□□ -2.22
CLOCK-201ENST00000309964 MT1FP04733 61 aa1.19□□□□□ -2.22
CLOCK-201ENST00000309964 PKD1P98161 4303 aa1.18□□□□□ -2.22
CLOCK-201ENST00000309964 SPRR2EP22531 72 aa1.18□□□□□ -2.22
CLOCK-201ENST00000309964 SPRR2BP35325 72 aa1.18□□□□□ -2.22
CLOCK-201ENST00000309964 SPRR2AP35326 72 aa1.18□□□□□ -2.22
CLOCK-201ENST00000309964 KRTAP4-1Q9BYQ7 146 aa1.18□□□□□ -2.22
CLOCK-201ENST00000309964 SYNE1Q8NF91 8797 aaKnown RBP1.17□□□□□ -2.22
CLOCK-201ENST00000309964 HSPG2P98160 4391 aa1.17□□□□□ -2.22
CLOCK-201ENST00000309964 SACSQ9NZJ4 4579 aa1.17□□□□□ -2.22
CLOCK-201ENST00000309964 DYNC1H1Q14204 4646 aaKnown RBP1.16□□□□□ -2.22
CLOCK-201ENST00000309964 KRTAP19-5Q3LI72 72 aa1.16□□□□□ -2.22
CLOCK-201ENST00000309964 MYCBP2O75592 4640 aa1.16□□□□□ -2.22
CLOCK-201ENST00000309964 SPRR2DP22532 72 aa1.16□□□□□ -2.22
CLOCK-201ENST00000309964 KRTAP19-1Q8IUB9 90 aa1.15□□□□□ -2.22
CLOCK-201ENST00000309964 KMT2DO14686 5537 aa1.15□□□□□ -2.22
CLOCK-201ENST00000309964 TNXBP22105 4242 aa1.15□□□□□ -2.23
CLOCK-201ENST00000309964 LCE2CQ5TA81 110 aa1.15□□□□□ -2.23
CLOCK-201ENST00000309964 LRP1Q07954 4544 aaKnown RBP1.15□□□□□ -2.23
CLOCK-201ENST00000309964 DNHD1Q96M86 4753 aa1.15□□□□□ -2.23
CLOCK-201ENST00000309964 KRTAP9-8Q9BYQ0 159 aa1.14□□□□□ -2.23
CLOCK-201ENST00000309964 MT1LQ93083 61 aa1.12□□□□□ -2.23
CLOCK-201ENST00000309964 HERC1Q15751 4861 aa1.12□□□□□ -2.23
CLOCK-201ENST00000309964 MT1XP80297 61 aa1.1□□□□□ -2.23
CLOCK-201ENST00000309964 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
CLOCK-201ENST00000309964 KRTAP19-6Q3LI70 58 aa1.1□□□□□ -2.23
CLOCK-201ENST00000309964 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
CLOCK-201ENST00000309964 LRP2P98164 4655 aa1.09□□□□□ -2.23
CLOCK-201ENST00000309964 KRTAP9-6A0A140TA67 174 aa1.09□□□□□ -2.23
CLOCK-201ENST00000309964 KRTAP9-7A8MTY7 169 aa1.09□□□□□ -2.23
CLOCK-201ENST00000309964 KRTAP9-3Q9BYQ3 159 aa1.09□□□□□ -2.23
CLOCK-201ENST00000309964 LCE3DQ9BYE3 92 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms