RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.35
SEC23A-201ENST00000307712 FRAS1Q86XX4 4008 aa6.58□□□□□ -1.36
SEC23A-201ENST00000307712 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
SEC23A-201ENST00000307712 KMT2AQ03164 3969 aa6.55□□□□□ -1.36
SEC23A-201ENST00000307712 DNAH5Q8TE73 4624 aa6.54□□□□□ -1.36
SEC23A-201ENST00000307712 M0R2T5 61 aa6.53□□□□□ -1.36
SEC23A-201ENST00000307712 DNAH3Q8TD57 4116 aa6.53□□□□□ -1.36
SEC23A-201ENST00000307712 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
SEC23A-201ENST00000307712 KRTAP10-4P60372 401 aaPredicted RBP6.5□□□□□ -1.37
SEC23A-201ENST00000307712 DNAH7Q8WXX0 4024 aa6.49□□□□□ -1.37
SEC23A-201ENST00000307712 CMYA5Q8N3K9 4069 aa6.48□□□□□ -1.37
SEC23A-201ENST00000307712 FAT1Q14517 4588 aa6.46□□□□□ -1.37
SEC23A-201ENST00000307712 TNP1P09430 55 aa6.46□□□□□ -1.38
SEC23A-201ENST00000307712 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
SEC23A-201ENST00000307712 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.38
SEC23A-201ENST00000307712 HECTD4Q9Y4D8 3996 aa6.4□□□□□ -1.39
SEC23A-201ENST00000307712 DNAH6Q9C0G6 4158 aa6.37□□□□□ -1.39
SEC23A-201ENST00000307712 VPS13BQ7Z7G8 4022 aa6.36□□□□□ -1.39
SEC23A-201ENST00000307712 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
SEC23A-201ENST00000307712 DYNC2H1Q8NCM8 4307 aaKnown RBP6.3□□□□□ -1.4
SEC23A-201ENST00000307712 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
SEC23A-201ENST00000307712 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
SEC23A-201ENST00000307712 SACSQ9NZJ4 4579 aa6.24□□□□□ -1.41
SEC23A-201ENST00000307712 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
SEC23A-201ENST00000307712 APOBP04114 4563 aaKnown RBP6.12□□□□□ -1.43
SEC23A-201ENST00000307712 KRTAP4-5Q9BYR2 181 aa6.12□□□□□ -1.43
SEC23A-201ENST00000307712 LRP1Q07954 4544 aaKnown RBP6.09□□□□□ -1.44
SEC23A-201ENST00000307712 FAT2Q9NYQ8 4349 aa6.06□□□□□ -1.44
SEC23A-201ENST00000307712 HYDINQ4G0P3 5121 aa6.05□□□□□ -1.44
SEC23A-201ENST00000307712 PKHD1P08F94 4074 aa6.02□□□□□ -1.45
SEC23A-201ENST00000307712 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
SEC23A-201ENST00000307712 KIAA1109Q2LD37 5005 aa5.98□□□□□ -1.45
SEC23A-201ENST00000307712 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
SEC23A-201ENST00000307712 RYR1P21817 5038 aa5.95□□□□□ -1.46
SEC23A-201ENST00000307712 PKD1P98161 4303 aa5.87□□□□□ -1.47
SEC23A-201ENST00000307712 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
SEC23A-201ENST00000307712 LRP2P98164 4655 aa5.85□□□□□ -1.47
SEC23A-201ENST00000307712 RYR3Q15413 4870 aa5.82□□□□□ -1.48
SEC23A-201ENST00000307712 KRTAP17-1Q9BYP8 105 aa5.8□□□□□ -1.48
SEC23A-201ENST00000307712 HSPG2P98160 4391 aa5.78□□□□□ -1.48
SEC23A-201ENST00000307712 KMT2CQ8NEZ4 4911 aaKnown RBP5.74□□□□□ -1.49
SEC23A-201ENST00000307712 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
SEC23A-201ENST00000307712 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
SEC23A-201ENST00000307712 RYR2Q92736 4967 aa5.65□□□□□ -1.51
SEC23A-201ENST00000307712 PKHD1L1Q86WI1 4243 aa5.63□□□□□ -1.51
SEC23A-201ENST00000307712 PRO2289Q9P1D8 64 aa5.63□□□□□ -1.51
SEC23A-201ENST00000307712 LPAP08519 4548 aa5.56□□□□□ -1.52
SEC23A-201ENST00000307712 INE1O15225 51 aa5.54□□□□□ -1.52
SEC23A-201ENST00000307712 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
SEC23A-201ENST00000307712 TNXBP22105 4242 aa5.53□□□□□ -1.52
SEC23A-201ENST00000307712 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
SEC23A-201ENST00000307712 HERC2O95714 4834 aa5.53□□□□□ -1.52
SEC23A-201ENST00000307712 SPRR2GQ9BYE4 73 aa5.42□□□□□ -1.54
SEC23A-201ENST00000307712 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
SEC23A-201ENST00000307712 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
SEC23A-201ENST00000307712 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
SEC23A-201ENST00000307712 PCLOQ9Y6V0 5065 aa5.32□□□□□ -1.56
SEC23A-201ENST00000307712 MT2AP02795 61 aa5.32□□□□□ -1.56
SEC23A-201ENST00000307712 MT1FP04733 61 aa5.3□□□□□ -1.56
SEC23A-201ENST00000307712 MT1HP80294 61 aa5.3□□□□□ -1.56
SEC23A-201ENST00000307712 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
SEC23A-201ENST00000307712 KRTAP19-2Q3LHN2 52 aa5.27□□□□□ -1.57
SEC23A-201ENST00000307712 BIRC6Q9NR09 4857 aa5.25□□□□□ -1.57
SEC23A-201ENST00000307712 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
SEC23A-201ENST00000307712 ABCA13Q86UQ4 5058 aa5.22□□□□□ -1.57
SEC23A-201ENST00000307712 HERC1Q15751 4861 aa5.13□□□□□ -1.59
SEC23A-201ENST00000307712 FLGP20930 4061 aaPredicted RBP5.13□□□□□ -1.59
SEC23A-201ENST00000307712 MUC2Q02817 5179 aa5.13□□□□□ -1.59
SEC23A-201ENST00000307712 LCE2CQ5TA81 110 aa5.12□□□□□ -1.59
SEC23A-201ENST00000307712 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
SEC23A-201ENST00000307712 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.59
SEC23A-201ENST00000307712 RNF213Q63HN8 5207 aa5.08□□□□□ -1.6
SEC23A-201ENST00000307712 MT1XP80297 61 aa5.08□□□□□ -1.6
SEC23A-201ENST00000307712 KRTAP19-8Q3LI54 63 aa5.07□□□□□ -1.6
SEC23A-201ENST00000307712 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
SEC23A-201ENST00000307712 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
SEC23A-201ENST00000307712 MT1BP07438 61 aa5.03□□□□□ -1.6
SEC23A-201ENST00000307712 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
SEC23A-201ENST00000307712 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
SEC23A-201ENST00000307712 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
SEC23A-201ENST00000307712 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
SEC23A-201ENST00000307712 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
SEC23A-201ENST00000307712 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
SEC23A-201ENST00000307712 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
SEC23A-201ENST00000307712 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
SEC23A-201ENST00000307712 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
SEC23A-201ENST00000307712 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
SEC23A-201ENST00000307712 LCE2BO14633 110 aa4.63□□□□□ -1.67
SEC23A-201ENST00000307712 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
SEC23A-201ENST00000307712 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
SEC23A-201ENST00000307712 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
SEC23A-201ENST00000307712 MT1GP13640 62 aa4.51□□□□□ -1.69
SEC23A-201ENST00000307712 MT1LQ93083 61 aa4.48□□□□□ -1.69
SEC23A-201ENST00000307712 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
SEC23A-201ENST00000307712 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
SEC23A-201ENST00000307712 MT1EP04732 61 aa4.43□□□□□ -1.7
SEC23A-201ENST00000307712 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
SEC23A-201ENST00000307712 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
SEC23A-201ENST00000307712 USH2AO75445 5202 aa4.43□□□□□ -1.7
SEC23A-201ENST00000307712 KMT2DO14686 5537 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms