RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 HYDINQ4G0P3 5121 aa5.8□□□□□ -1.48
PHTF2-203ENST00000307305 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
PHTF2-203ENST00000307305 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
PHTF2-203ENST00000307305 FAT2Q9NYQ8 4349 aa5.75□□□□□ -1.49
PHTF2-203ENST00000307305 A0A1B0GVY2 172 aa5.73□□□□□ -1.49
PHTF2-203ENST00000307305 PKD1P98161 4303 aa5.71□□□□□ -1.5
PHTF2-203ENST00000307305 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
PHTF2-203ENST00000307305 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
PHTF2-203ENST00000307305 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
PHTF2-203ENST00000307305 M0R2T5 61 aa5.68□□□□□ -1.5
PHTF2-203ENST00000307305 LUZP6Q538Z0 58 aa5.68□□□□□ -1.5
PHTF2-203ENST00000307305 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
PHTF2-203ENST00000307305 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
PHTF2-203ENST00000307305 DYNC1H1Q14204 4646 aaKnown RBP5.61□□□□□ -1.51
PHTF2-203ENST00000307305 PKHD1P08F94 4074 aa5.61□□□□□ -1.51
PHTF2-203ENST00000307305 KRTAP3-3Q9BYR6 98 aa5.59□□□□□ -1.51
PHTF2-203ENST00000307305 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.52
PHTF2-203ENST00000307305 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
PHTF2-203ENST00000307305 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
PHTF2-203ENST00000307305 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
PHTF2-203ENST00000307305 KRTAP3-2Q9BYR7 98 aa5.55□□□□□ -1.52
PHTF2-203ENST00000307305 KRTAP21-3Q3LHN1 58 aa5.51□□□□□ -1.53
PHTF2-203ENST00000307305 SACSQ9NZJ4 4579 aa5.48□□□□□ -1.53
PHTF2-203ENST00000307305 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
PHTF2-203ENST00000307305 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
PHTF2-203ENST00000307305 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
PHTF2-203ENST00000307305 RYR1P21817 5038 aa5.43□□□□□ -1.54
PHTF2-203ENST00000307305 APOBP04114 4563 aaKnown RBP5.43□□□□□ -1.54
PHTF2-203ENST00000307305 KRTAP4-5Q9BYR2 181 aa5.41□□□□□ -1.54
PHTF2-203ENST00000307305 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
PHTF2-203ENST00000307305 TNP1P09430 55 aa5.34□□□□□ -1.55
PHTF2-203ENST00000307305 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.55
PHTF2-203ENST00000307305 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
PHTF2-203ENST00000307305 KMT2CQ8NEZ4 4911 aaKnown RBP5.32□□□□□ -1.56
PHTF2-203ENST00000307305 LRP2P98164 4655 aa5.3□□□□□ -1.56
PHTF2-203ENST00000307305 RYR3Q15413 4870 aa5.29□□□□□ -1.56
PHTF2-203ENST00000307305 KRTAP17-1Q9BYP8 105 aa5.25□□□□□ -1.57
PHTF2-203ENST00000307305 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
PHTF2-203ENST00000307305 RYR2Q92736 4967 aa5.24□□□□□ -1.57
PHTF2-203ENST00000307305 HSPG2P98160 4391 aa5.22□□□□□ -1.57
PHTF2-203ENST00000307305 TNXBP22105 4242 aa5.19□□□□□ -1.58
PHTF2-203ENST00000307305 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
PHTF2-203ENST00000307305 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
PHTF2-203ENST00000307305 LPAP08519 4548 aa5.16□□□□□ -1.58
PHTF2-203ENST00000307305 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
PHTF2-203ENST00000307305 EPPK1P58107 5090 aaKnown RBP4.97□□□□□ -1.61
PHTF2-203ENST00000307305 ABCA13Q86UQ4 5058 aa4.97□□□□□ -1.61
PHTF2-203ENST00000307305 HERC2O95714 4834 aa4.92□□□□□ -1.62
PHTF2-203ENST00000307305 MUC2Q02817 5179 aa4.91□□□□□ -1.62
PHTF2-203ENST00000307305 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
PHTF2-203ENST00000307305 MUC17Q685J3 4493 aa4.71□□□□□ -1.66
PHTF2-203ENST00000307305 RNF213Q63HN8 5207 aa4.7□□□□□ -1.66
PHTF2-203ENST00000307305 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
PHTF2-203ENST00000307305 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
PHTF2-203ENST00000307305 KRTAP10-12P60413 245 aa4.65□□□□□ -1.66
PHTF2-203ENST00000307305 HERC1Q15751 4861 aa4.65□□□□□ -1.67
PHTF2-203ENST00000307305 PCLOQ9Y6V0 5065 aa4.63□□□□□ -1.67
PHTF2-203ENST00000307305 KRTAP12-3P60328 96 aa4.63□□□□□ -1.67
PHTF2-203ENST00000307305 MT1FP04733 61 aa4.6□□□□□ -1.67
PHTF2-203ENST00000307305 MT1HP80294 61 aa4.6□□□□□ -1.67
PHTF2-203ENST00000307305 MT2AP02795 61 aa4.59□□□□□ -1.67
PHTF2-203ENST00000307305 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
PHTF2-203ENST00000307305 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
PHTF2-203ENST00000307305 KRTAP19-2Q3LHN2 52 aa4.52□□□□□ -1.69
PHTF2-203ENST00000307305 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
PHTF2-203ENST00000307305 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
PHTF2-203ENST00000307305 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
PHTF2-203ENST00000307305 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
PHTF2-203ENST00000307305 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
PHTF2-203ENST00000307305 CRCT1Q9UGL9 99 aa4.44□□□□□ -1.7
PHTF2-203ENST00000307305 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
PHTF2-203ENST00000307305 BIRC6Q9NR09 4857 aa4.4□□□□□ -1.7
PHTF2-203ENST00000307305 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
PHTF2-203ENST00000307305 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
PHTF2-203ENST00000307305 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
PHTF2-203ENST00000307305 MT1XP80297 61 aa4.33□□□□□ -1.72
PHTF2-203ENST00000307305 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
PHTF2-203ENST00000307305 INE1O15225 51 aa4.31□□□□□ -1.72
PHTF2-203ENST00000307305 MT1BP07438 61 aa4.31□□□□□ -1.72
PHTF2-203ENST00000307305 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
PHTF2-203ENST00000307305 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
PHTF2-203ENST00000307305 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
PHTF2-203ENST00000307305 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
PHTF2-203ENST00000307305 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
PHTF2-203ENST00000307305 KRTAP19-8Q3LI54 63 aa4.24□□□□□ -1.73
PHTF2-203ENST00000307305 USH2AO75445 5202 aa4.24□□□□□ -1.73
PHTF2-203ENST00000307305 KMT2DO14686 5537 aa4.19□□□□□ -1.74
PHTF2-203ENST00000307305 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
PHTF2-203ENST00000307305 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
PHTF2-203ENST00000307305 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
PHTF2-203ENST00000307305 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
PHTF2-203ENST00000307305 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
PHTF2-203ENST00000307305 LCE2BO14633 110 aa4.08□□□□□ -1.76
PHTF2-203ENST00000307305 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
PHTF2-203ENST00000307305 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
PHTF2-203ENST00000307305 MT1GP13640 62 aa3.91□□□□□ -1.78
PHTF2-203ENST00000307305 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
PHTF2-203ENST00000307305 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
PHTF2-203ENST00000307305 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
PHTF2-203ENST00000307305 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms