RNA–Protein interactions for RNA: ENST00000304527.8

SH3D19-201, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH3D19, Length 5,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-201ENST00000304527 KRTAP17-1Q9BYP8 105 aa3.37□□□□□ -1.87
SH3D19-201ENST00000304527 DNAH5Q8TE73 4624 aa3.37□□□□□ -1.87
SH3D19-201ENST00000304527 XP32Q5T750 250 aa3.36□□□□□ -1.87
SH3D19-201ENST00000304527 P0C880 135 aa3.36□□□□□ -1.87
SH3D19-201ENST00000304527 PRO2289Q9P1D8 64 aa3.35□□□□□ -1.87
SH3D19-201ENST00000304527 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
SH3D19-201ENST00000304527 LRP1BQ9NZR2 4599 aa3.34□□□□□ -1.87
SH3D19-201ENST00000304527 KRTAP10-10P60014 251 aa3.34□□□□□ -1.88
SH3D19-201ENST00000304527 TNP1P09430 55 aa3.33□□□□□ -1.88
SH3D19-201ENST00000304527 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
SH3D19-201ENST00000304527 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
SH3D19-201ENST00000304527 FRAS1Q86XX4 4008 aa3.29□□□□□ -1.88
SH3D19-201ENST00000304527 FAT2Q9NYQ8 4349 aa3.29□□□□□ -1.88
SH3D19-201ENST00000304527 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
SH3D19-201ENST00000304527 PKD1P98161 4303 aa3.28□□□□□ -1.88
SH3D19-201ENST00000304527 HYDINQ4G0P3 5121 aa3.27□□□□□ -1.89
SH3D19-201ENST00000304527 VPS13BQ7Z7G8 4022 aa3.26□□□□□ -1.89
SH3D19-201ENST00000304527 SACSQ9NZJ4 4579 aa3.25□□□□□ -1.89
SH3D19-201ENST00000304527 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
SH3D19-201ENST00000304527 FAT1Q14517 4588 aa3.21□□□□□ -1.89
SH3D19-201ENST00000304527 KRTAP3-1Q9BYR8 98 aa3.21□□□□□ -1.9
SH3D19-201ENST00000304527 LCE2DQ5TA82 110 aaPredicted RBP3.2□□□□□ -1.9
SH3D19-201ENST00000304527 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
SH3D19-201ENST00000304527 PKHD1P08F94 4074 aa3.19□□□□□ -1.9
SH3D19-201ENST00000304527 RYR2Q92736 4967 aa3.19□□□□□ -1.9
SH3D19-201ENST00000304527 C10orf95Q9H7T3 257 aa3.18□□□□□ -1.9
SH3D19-201ENST00000304527 MT1HL1P0DM35 61 aa3.17□□□□□ -1.9
SH3D19-201ENST00000304527 LCE2CQ5TA81 110 aa3.16□□□□□ -1.9
SH3D19-201ENST00000304527 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
SH3D19-201ENST00000304527 H0YAA0 97 aa3.14□□□□□ -1.91
SH3D19-201ENST00000304527 PKHD1L1Q86WI1 4243 aa3.11□□□□□ -1.91
SH3D19-201ENST00000304527 RYR1P21817 5038 aa3.09□□□□□ -1.91
SH3D19-201ENST00000304527 KMT2CQ8NEZ4 4911 aaKnown RBP3.09□□□□□ -1.91
SH3D19-201ENST00000304527 LCE2BO14633 110 aa3.09□□□□□ -1.92
SH3D19-201ENST00000304527 FAT3Q8TDW7 4589 aa3.06□□□□□ -1.92
SH3D19-201ENST00000304527 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
SH3D19-201ENST00000304527 HSPG2P98160 4391 aa3.06□□□□□ -1.92
SH3D19-201ENST00000304527 KIAA1109Q2LD37 5005 aa3.06□□□□□ -1.92
SH3D19-201ENST00000304527 RYR3Q15413 4870 aa3.05□□□□□ -1.92
SH3D19-201ENST00000304527 KRTAP10-6P60371 365 aaPredicted RBP3.05□□□□□ -1.92
SH3D19-201ENST00000304527 KRTAP4-5Q9BYR2 181 aa3.03□□□□□ -1.92
SH3D19-201ENST00000304527 TNXBP22105 4242 aa3.01□□□□□ -1.93
SH3D19-201ENST00000304527 KRTAP13-4Q3LI77 160 aa2.99□□□□□ -1.93
SH3D19-201ENST00000304527 MYCBP2O75592 4640 aa2.98□□□□□ -1.93
SH3D19-201ENST00000304527 INE1O15225 51 aa2.95□□□□□ -1.94
SH3D19-201ENST00000304527 LCE2AQ5TA79 106 aaPredicted RBP2.93□□□□□ -1.94
SH3D19-201ENST00000304527 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
SH3D19-201ENST00000304527 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
SH3D19-201ENST00000304527 EPPK1P58107 5090 aaKnown RBP2.9□□□□□ -1.94
SH3D19-201ENST00000304527 LRP2P98164 4655 aa2.88□□□□□ -1.95
SH3D19-201ENST00000304527 KRTAP4-1Q9BYQ7 146 aa2.88□□□□□ -1.95
SH3D19-201ENST00000304527 HERC2O95714 4834 aa2.85□□□□□ -1.95
SH3D19-201ENST00000304527 BIRC6Q9NR09 4857 aa2.83□□□□□ -1.96
SH3D19-201ENST00000304527 ABCA13Q86UQ4 5058 aa2.82□□□□□ -1.96
SH3D19-201ENST00000304527 LPAP08519 4548 aa2.8□□□□□ -1.96
SH3D19-201ENST00000304527 LORP23490 312 aaPredicted RBP2.8□□□□□ -1.96
SH3D19-201ENST00000304527 HERC1Q15751 4861 aa2.78□□□□□ -1.96
SH3D19-201ENST00000304527 KRTAP19-2Q3LHN2 52 aa2.77□□□□□ -1.97
SH3D19-201ENST00000304527 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
SH3D19-201ENST00000304527 MUC17Q685J3 4493 aa2.72□□□□□ -1.97
SH3D19-201ENST00000304527 KRTAP8-1Q8IUC2 63 aa2.71□□□□□ -1.97
SH3D19-201ENST00000304527 MT1HP80294 61 aa2.68□□□□□ -1.98
SH3D19-201ENST00000304527 CRCT1Q9UGL9 99 aa2.68□□□□□ -1.98
SH3D19-201ENST00000304527 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
SH3D19-201ENST00000304527 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.98
SH3D19-201ENST00000304527 PCLOQ9Y6V0 5065 aa2.65□□□□□ -1.98
SH3D19-201ENST00000304527 HMCN2Q8NDA2 5059 aa2.64□□□□□ -1.99
SH3D19-201ENST00000304527 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
SH3D19-201ENST00000304527 MT2AP02795 61 aa2.62□□□□□ -1.99
SH3D19-201ENST00000304527 KRTAP19-1Q8IUB9 90 aa2.6□□□□□ -1.99
SH3D19-201ENST00000304527 MT1FP04733 61 aa2.6□□□□□ -1.99
SH3D19-201ENST00000304527 KRTAP19-4Q3LI73 84 aa2.59□□□□□ -2
SH3D19-201ENST00000304527 KRTAP9-8Q9BYQ0 159 aa2.56□□□□□ -2
SH3D19-201ENST00000304527 MUC2Q02817 5179 aa2.56□□□□□ -2
SH3D19-201ENST00000304527 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
SH3D19-201ENST00000304527 RNF213Q63HN8 5207 aa2.54□□□□□ -2
SH3D19-201ENST00000304527 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
SH3D19-201ENST00000304527 LCE3AQ5TA76 89 aa2.53□□□□□ -2.01
SH3D19-201ENST00000304527 KRTAP10-7P60409 375 aaPredicted RBP2.52□□□□□ -2.01
SH3D19-201ENST00000304527 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
SH3D19-201ENST00000304527 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
SH3D19-201ENST00000304527 KRTAP9-6A0A140TA67 174 aa2.49□□□□□ -2.01
SH3D19-201ENST00000304527 FAT4Q6V0I7 4981 aa2.49□□□□□ -2.01
SH3D19-201ENST00000304527 MT1BP07438 61 aa2.48□□□□□ -2.01
SH3D19-201ENST00000304527 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
SH3D19-201ENST00000304527 KRTAP9-2Q9BYQ4 174 aa2.48□□□□□ -2.01
SH3D19-201ENST00000304527 KRTAP9-3Q9BYQ3 159 aa2.47□□□□□ -2.01
SH3D19-201ENST00000304527 SPRR2EP22531 72 aa2.45□□□□□ -2.02
SH3D19-201ENST00000304527 SPRR2BP35325 72 aa2.45□□□□□ -2.02
SH3D19-201ENST00000304527 SPRR2AP35326 72 aa2.45□□□□□ -2.02
SH3D19-201ENST00000304527 MT1XP80297 61 aa2.45□□□□□ -2.02
SH3D19-201ENST00000304527 KRTAP10-5P60370 271 aa2.44□□□□□ -2.02
SH3D19-201ENST00000304527 MT3P25713 68 aa2.42□□□□□ -2.02
SH3D19-201ENST00000304527 SPRR5A0A1B0GTR4 108 aa2.39□□□□□ -2.03
SH3D19-201ENST00000304527 SPRR2DP22532 72 aa2.39□□□□□ -2.03
SH3D19-201ENST00000304527 KRTAP19-6Q3LI70 58 aa2.36□□□□□ -2.03
SH3D19-201ENST00000304527 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
SH3D19-201ENST00000304527 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
SH3D19-201ENST00000304527 LCE4AQ5TA78 99 aa2.3□□□□□ -2.04
SH3D19-201ENST00000304527 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms