RNA–Protein interactions for RNA: ENST00000299608.6

TMX3-201, Transcript of thioredoxin related transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMX3, Length 4,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-201ENST00000299608 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
TMX3-201ENST00000299608 RYR1P21817 5038 aa4.64□□□□□ -1.67
TMX3-201ENST00000299608 DNAH11Q96DT5 4516 aa4.64□□□□□ -1.67
TMX3-201ENST00000299608 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
TMX3-201ENST00000299608 AKAP9Q99996 3911 aa4.64□□□□□ -1.67
TMX3-201ENST00000299608 ALMS1Q8TCU4 4167 aa4.61□□□□□ -1.67
TMX3-201ENST00000299608 KRTAP4-1Q9BYQ7 146 aa4.59□□□□□ -1.68
TMX3-201ENST00000299608 FAT1Q14517 4588 aa4.59□□□□□ -1.68
TMX3-201ENST00000299608 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
TMX3-201ENST00000299608 DYNC1H1Q14204 4646 aaKnown RBP4.54□□□□□ -1.68
TMX3-201ENST00000299608 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
TMX3-201ENST00000299608 KIAA1109Q2LD37 5005 aa4.5□□□□□ -1.69
TMX3-201ENST00000299608 DNAH10Q8IVF4 4471 aa4.5□□□□□ -1.69
TMX3-201ENST00000299608 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
TMX3-201ENST00000299608 MT1HP80294 61 aa4.48□□□□□ -1.69
TMX3-201ENST00000299608 LRP1BQ9NZR2 4599 aa4.48□□□□□ -1.69
TMX3-201ENST00000299608 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
TMX3-201ENST00000299608 STARD9Q9P2P6 4700 aa4.44□□□□□ -1.7
TMX3-201ENST00000299608 DNAH8Q96JB1 4490 aa4.43□□□□□ -1.7
TMX3-201ENST00000299608 SACSQ9NZJ4 4579 aa4.42□□□□□ -1.7
TMX3-201ENST00000299608 PRKDCP78527 4128 aaKnown RBP4.42□□□□□ -1.7
TMX3-201ENST00000299608 VPS13DQ5THJ4 4388 aa4.42□□□□□ -1.7
TMX3-201ENST00000299608 MT2AP02795 61 aa4.41□□□□□ -1.7
TMX3-201ENST00000299608 RYR3Q15413 4870 aa4.37□□□□□ -1.71
TMX3-201ENST00000299608 DNAH17Q9UFH2 4485 aa4.36□□□□□ -1.71
TMX3-201ENST00000299608 MYCBP2O75592 4640 aa4.35□□□□□ -1.71
TMX3-201ENST00000299608 MT1FP04733 61 aa4.33□□□□□ -1.72
TMX3-201ENST00000299608 LYSTQ99698 3801 aa4.33□□□□□ -1.72
TMX3-201ENST00000299608 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
TMX3-201ENST00000299608 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
TMX3-201ENST00000299608 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
TMX3-201ENST00000299608 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
TMX3-201ENST00000299608 VPS13BQ7Z7G8 4022 aa4.29□□□□□ -1.72
TMX3-201ENST00000299608 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
TMX3-201ENST00000299608 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
TMX3-201ENST00000299608 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
TMX3-201ENST00000299608 KMT2AQ03164 3969 aa4.24□□□□□ -1.73
TMX3-201ENST00000299608 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
TMX3-201ENST00000299608 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
TMX3-201ENST00000299608 HERC2O95714 4834 aa4.21□□□□□ -1.74
TMX3-201ENST00000299608 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
TMX3-201ENST00000299608 LRP1Q07954 4544 aaKnown RBP4.19□□□□□ -1.74
TMX3-201ENST00000299608 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
TMX3-201ENST00000299608 ANK2Q01484 3957 aa4.18□□□□□ -1.74
TMX3-201ENST00000299608 INE1O15225 51 aa4.17□□□□□ -1.74
TMX3-201ENST00000299608 PCLOQ9Y6V0 5065 aa4.11□□□□□ -1.75
TMX3-201ENST00000299608 RYR2Q92736 4967 aa4.1□□□□□ -1.75
TMX3-201ENST00000299608 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
TMX3-201ENST00000299608 BIRC6Q9NR09 4857 aa4.08□□□□□ -1.76
TMX3-201ENST00000299608 LRP2P98164 4655 aa4.07□□□□□ -1.76
TMX3-201ENST00000299608 DNAH3Q8TD57 4116 aa4.07□□□□□ -1.76
TMX3-201ENST00000299608 KRTAP19-1Q8IUB9 90 aa4.06□□□□□ -1.76
TMX3-201ENST00000299608 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
TMX3-201ENST00000299608 DNAH6Q9C0G6 4158 aa4□□□□□ -1.77
TMX3-201ENST00000299608 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
TMX3-201ENST00000299608 EPPK1P58107 5090 aaKnown RBP3.98□□□□□ -1.77
TMX3-201ENST00000299608 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
TMX3-201ENST00000299608 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
TMX3-201ENST00000299608 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
TMX3-201ENST00000299608 LCE2CQ5TA81 110 aa3.93□□□□□ -1.78
TMX3-201ENST00000299608 SPRR2EP22531 72 aa3.92□□□□□ -1.78
TMX3-201ENST00000299608 SPRR2BP35325 72 aa3.92□□□□□ -1.78
TMX3-201ENST00000299608 SPRR2AP35326 72 aa3.92□□□□□ -1.78
TMX3-201ENST00000299608 HERC1Q15751 4861 aa3.92□□□□□ -1.78
TMX3-201ENST00000299608 MT1BP07438 61 aa3.92□□□□□ -1.78
TMX3-201ENST00000299608 MT1XP80297 61 aa3.91□□□□□ -1.78
TMX3-201ENST00000299608 PKD1P98161 4303 aa3.9□□□□□ -1.79
TMX3-201ENST00000299608 FRAS1Q86XX4 4008 aa3.89□□□□□ -1.79
TMX3-201ENST00000299608 HSPG2P98160 4391 aa3.87□□□□□ -1.79
TMX3-201ENST00000299608 KMT2CQ8NEZ4 4911 aaKnown RBP3.87□□□□□ -1.79
TMX3-201ENST00000299608 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
TMX3-201ENST00000299608 PKHD1P08F94 4074 aa3.86□□□□□ -1.79
TMX3-201ENST00000299608 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
TMX3-201ENST00000299608 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
TMX3-201ENST00000299608 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
TMX3-201ENST00000299608 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
TMX3-201ENST00000299608 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
TMX3-201ENST00000299608 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
TMX3-201ENST00000299608 HECTD4Q9Y4D8 3996 aa3.81□□□□□ -1.8
TMX3-201ENST00000299608 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
TMX3-201ENST00000299608 SPRR2DP22532 72 aa3.78□□□□□ -1.8
TMX3-201ENST00000299608 LPAP08519 4548 aa3.78□□□□□ -1.8
TMX3-201ENST00000299608 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
TMX3-201ENST00000299608 LCE2BO14633 110 aa3.76□□□□□ -1.81
TMX3-201ENST00000299608 MT1GP13640 62 aa3.76□□□□□ -1.81
TMX3-201ENST00000299608 KRTAP19-2Q3LHN2 52 aa3.74□□□□□ -1.81
TMX3-201ENST00000299608 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
TMX3-201ENST00000299608 PKHD1L1Q86WI1 4243 aa3.66□□□□□ -1.82
TMX3-201ENST00000299608 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
TMX3-201ENST00000299608 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
TMX3-201ENST00000299608 MUC17Q685J3 4493 aa3.61□□□□□ -1.83
TMX3-201ENST00000299608 RNF213Q63HN8 5207 aa3.59□□□□□ -1.84
TMX3-201ENST00000299608 FAT4Q6V0I7 4981 aa3.59□□□□□ -1.84
TMX3-201ENST00000299608 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.84
TMX3-201ENST00000299608 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.84
TMX3-201ENST00000299608 MUC2Q02817 5179 aa3.56□□□□□ -1.84
TMX3-201ENST00000299608 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
TMX3-201ENST00000299608 MT1LQ93083 61 aa3.53□□□□□ -1.84
TMX3-201ENST00000299608 MT1EP04732 61 aa3.52□□□□□ -1.85
TMX3-201ENST00000299608 LCE2AQ5TA79 106 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms