RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 PLECQ15149 4684 aaKnown RBP3.02□□□□□ -1.93
RAG1-201ENST00000299440 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
RAG1-201ENST00000299440 BSNQ9UPA5 3926 aa3.02□□□□□ -1.93
RAG1-201ENST00000299440 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
RAG1-201ENST00000299440 KRTAP4-1Q9BYQ7 146 aa3.01□□□□□ -1.93
RAG1-201ENST00000299440 KRTAP3-2Q9BYR7 98 aa2.99□□□□□ -1.93
RAG1-201ENST00000299440 DNAH11Q96DT5 4516 aa2.97□□□□□ -1.93
RAG1-201ENST00000299440 CSMD3Q7Z407 3707 aa2.96□□□□□ -1.94
RAG1-201ENST00000299440 DNAH1Q9P2D7 4330 aa2.95□□□□□ -1.94
RAG1-201ENST00000299440 MT2AP02795 61 aa2.95□□□□□ -1.94
RAG1-201ENST00000299440 VPS13CQ709C8 3753 aa2.95□□□□□ -1.94
RAG1-201ENST00000299440 RYR1P21817 5038 aa2.94□□□□□ -1.94
RAG1-201ENST00000299440 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
RAG1-201ENST00000299440 AKAP9Q99996 3911 aa2.93□□□□□ -1.94
RAG1-201ENST00000299440 KRTAP17-1Q9BYP8 105 aa2.91□□□□□ -1.94
RAG1-201ENST00000299440 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
RAG1-201ENST00000299440 MT1FP04733 61 aa2.89□□□□□ -1.95
RAG1-201ENST00000299440 DYNC1H1Q14204 4646 aaKnown RBP2.88□□□□□ -1.95
RAG1-201ENST00000299440 SPRR2EP22531 72 aa2.88□□□□□ -1.95
RAG1-201ENST00000299440 SPRR2BP35325 72 aa2.88□□□□□ -1.95
RAG1-201ENST00000299440 SPRR2AP35326 72 aa2.88□□□□□ -1.95
RAG1-201ENST00000299440 ZNF469Q96JG9 3925 aaPredicted RBP2.86□□□□□ -1.95
RAG1-201ENST00000299440 DNAH10Q8IVF4 4471 aa2.86□□□□□ -1.95
RAG1-201ENST00000299440 LRP1BQ9NZR2 4599 aa2.85□□□□□ -1.95
RAG1-201ENST00000299440 FAT1Q14517 4588 aa2.84□□□□□ -1.96
RAG1-201ENST00000299440 INE1O15225 51 aa2.81□□□□□ -1.96
RAG1-201ENST00000299440 SACSQ9NZJ4 4579 aa2.8□□□□□ -1.96
RAG1-201ENST00000299440 FAT2Q9NYQ8 4349 aa2.8□□□□□ -1.96
RAG1-201ENST00000299440 RYR3Q15413 4870 aa2.79□□□□□ -1.96
RAG1-201ENST00000299440 SPRR2DP22532 72 aa2.79□□□□□ -1.96
RAG1-201ENST00000299440 DNAH2Q9P225 4427 aa2.78□□□□□ -1.96
RAG1-201ENST00000299440 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
RAG1-201ENST00000299440 VPS13DQ5THJ4 4388 aa2.77□□□□□ -1.97
RAG1-201ENST00000299440 STARD9Q9P2P6 4700 aa2.77□□□□□ -1.97
RAG1-201ENST00000299440 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
RAG1-201ENST00000299440 DNAH17Q9UFH2 4485 aa2.76□□□□□ -1.97
RAG1-201ENST00000299440 KRTAP23-1A1A580 65 aa2.75□□□□□ -1.97
RAG1-201ENST00000299440 PRKDCP78527 4128 aaKnown RBP2.75□□□□□ -1.97
RAG1-201ENST00000299440 VPS13BQ7Z7G8 4022 aa2.73□□□□□ -1.97
RAG1-201ENST00000299440 KIAA1109Q2LD37 5005 aa2.71□□□□□ -1.98
RAG1-201ENST00000299440 BIRC6Q9NR09 4857 aa2.71□□□□□ -1.98
RAG1-201ENST00000299440 LCE2BO14633 110 aa2.71□□□□□ -1.98
RAG1-201ENST00000299440 APOBP04114 4563 aaKnown RBP2.69□□□□□ -1.98
RAG1-201ENST00000299440 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
RAG1-201ENST00000299440 DNAH8Q96JB1 4490 aa2.69□□□□□ -1.98
RAG1-201ENST00000299440 KRTAP19-1Q8IUB9 90 aa2.69□□□□□ -1.98
RAG1-201ENST00000299440 ANK2Q01484 3957 aa2.66□□□□□ -1.98
RAG1-201ENST00000299440 KRTAP9-2Q9BYQ4 174 aa2.65□□□□□ -1.99
RAG1-201ENST00000299440 HERC2O95714 4834 aa2.65□□□□□ -1.99
RAG1-201ENST00000299440 LYSTQ99698 3801 aa2.64□□□□□ -1.99
RAG1-201ENST00000299440 FAT3Q8TDW7 4589 aa2.64□□□□□ -1.99
RAG1-201ENST00000299440 KMT2AQ03164 3969 aa2.63□□□□□ -1.99
RAG1-201ENST00000299440 PCLOQ9Y6V0 5065 aa2.63□□□□□ -1.99
RAG1-201ENST00000299440 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
RAG1-201ENST00000299440 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
RAG1-201ENST00000299440 DNAH3Q8TD57 4116 aa2.6□□□□□ -1.99
RAG1-201ENST00000299440 LCE3BQ5TA77 95 aa2.59□□□□□ -1.99
RAG1-201ENST00000299440 RYR2Q92736 4967 aa2.59□□□□□ -1.99
RAG1-201ENST00000299440 MYCBP2O75592 4640 aa2.59□□□□□ -2
RAG1-201ENST00000299440 MT1GP13640 62 aa2.58□□□□□ -2
RAG1-201ENST00000299440 KRTAP9-6A0A140TA67 174 aa2.58□□□□□ -2
RAG1-201ENST00000299440 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
RAG1-201ENST00000299440 KRTAP9-8Q9BYQ0 159 aa2.57□□□□□ -2
RAG1-201ENST00000299440 KRTAP4-8A0A0G2JLE6 195 aa2.57□□□□□ -2
RAG1-201ENST00000299440 KRTAP4-8Q9BYQ9 185 aa2.57□□□□□ -2
RAG1-201ENST00000299440 LCE2CQ5TA81 110 aa2.56□□□□□ -2
RAG1-201ENST00000299440 HERC1Q15751 4861 aa2.56□□□□□ -2
RAG1-201ENST00000299440 LCE2DQ5TA82 110 aaPredicted RBP2.55□□□□□ -2
RAG1-201ENST00000299440 LRP1Q07954 4544 aaKnown RBP2.55□□□□□ -2
RAG1-201ENST00000299440 EPPK1P58107 5090 aaKnown RBP2.54□□□□□ -2
RAG1-201ENST00000299440 MT1BP07438 61 aa2.54□□□□□ -2
RAG1-201ENST00000299440 MT1XP80297 61 aa2.54□□□□□ -2
RAG1-201ENST00000299440 KRTAP9-3Q9BYQ3 159 aa2.53□□□□□ -2
RAG1-201ENST00000299440 DNAH6Q9C0G6 4158 aa2.53□□□□□ -2
RAG1-201ENST00000299440 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
RAG1-201ENST00000299440 CMYA5Q8N3K9 4069 aa2.52□□□□□ -2.01
RAG1-201ENST00000299440 MT4P47944 62 aa2.52□□□□□ -2.01
RAG1-201ENST00000299440 PKHD1L1Q86WI1 4243 aa2.52□□□□□ -2.01
RAG1-201ENST00000299440 HSPG2P98160 4391 aa2.51□□□□□ -2.01
RAG1-201ENST00000299440 DNAH7Q8WXX0 4024 aa2.51□□□□□ -2.01
RAG1-201ENST00000299440 PKD1P98161 4303 aa2.5□□□□□ -2.01
RAG1-201ENST00000299440 FRAS1Q86XX4 4008 aa2.49□□□□□ -2.01
RAG1-201ENST00000299440 FSIP2Q5CZC0 6907 aa2.46□□□□□ -2.02
RAG1-201ENST00000299440 HYDINQ4G0P3 5121 aa2.46□□□□□ -2.02
RAG1-201ENST00000299440 LRP2P98164 4655 aa2.46□□□□□ -2.02
RAG1-201ENST00000299440 KRTAP19-4Q3LI73 84 aa2.44□□□□□ -2.02
RAG1-201ENST00000299440 PKHD1P08F94 4074 aa2.44□□□□□ -2.02
RAG1-201ENST00000299440 LPAP08519 4548 aa2.44□□□□□ -2.02
RAG1-201ENST00000299440 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
RAG1-201ENST00000299440 KRTAP9-7A8MTY7 169 aa2.41□□□□□ -2.02
RAG1-201ENST00000299440 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
RAG1-201ENST00000299440 ABCA13Q86UQ4 5058 aa2.37□□□□□ -2.03
RAG1-201ENST00000299440 UBR4Q5T4S7 5183 aa2.36□□□□□ -2.03
RAG1-201ENST00000299440 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
RAG1-201ENST00000299440 KRTAP19-6Q3LI70 58 aa2.36□□□□□ -2.03
RAG1-201ENST00000299440 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
RAG1-201ENST00000299440 HECTD4Q9Y4D8 3996 aa2.34□□□□□ -2.03
RAG1-201ENST00000299440 KMT2CQ8NEZ4 4911 aaKnown RBP2.33□□□□□ -2.04
RAG1-201ENST00000299440 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
RAG1-201ENST00000299440 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 242.7 ms