RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
TRIM44-201ENST00000299413 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
TRIM44-201ENST00000299413 KRTAP8-1Q8IUC2 63 aa4.43□□□□□ -1.7
TRIM44-201ENST00000299413 CMYA5Q8N3K9 4069 aa4.43□□□□□ -1.7
TRIM44-201ENST00000299413 DNAH2Q9P225 4427 aa4.39□□□□□ -1.71
TRIM44-201ENST00000299413 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
TRIM44-201ENST00000299413 HUWE1Q7Z6Z7 4374 aaKnown RBP4.38□□□□□ -1.71
TRIM44-201ENST00000299413 DNAH3Q8TD57 4116 aa4.38□□□□□ -1.71
TRIM44-201ENST00000299413 KRTAP12-3P60328 96 aa4.36□□□□□ -1.71
TRIM44-201ENST00000299413 KMT2AQ03164 3969 aa4.34□□□□□ -1.71
TRIM44-201ENST00000299413 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
TRIM44-201ENST00000299413 FRAS1Q86XX4 4008 aa4.24□□□□□ -1.73
TRIM44-201ENST00000299413 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
TRIM44-201ENST00000299413 INE1O15225 51 aa4.2□□□□□ -1.74
TRIM44-201ENST00000299413 KRTAP3-3Q9BYR6 98 aa4.19□□□□□ -1.74
TRIM44-201ENST00000299413 KRTAP3-2Q9BYR7 98 aa4.17□□□□□ -1.74
TRIM44-201ENST00000299413 PRKDCP78527 4128 aaKnown RBP4.1□□□□□ -1.75
TRIM44-201ENST00000299413 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
TRIM44-201ENST00000299413 DNAH10Q8IVF4 4471 aa4.07□□□□□ -1.76
TRIM44-201ENST00000299413 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
TRIM44-201ENST00000299413 DNAH6Q9C0G6 4158 aa4.06□□□□□ -1.76
TRIM44-201ENST00000299413 VPS13DQ5THJ4 4388 aa4.05□□□□□ -1.76
TRIM44-201ENST00000299413 KRTAP10-4P60372 401 aaPredicted RBP4.03□□□□□ -1.76
TRIM44-201ENST00000299413 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
TRIM44-201ENST00000299413 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
TRIM44-201ENST00000299413 DNAH9Q9NYC9 4486 aa4.01□□□□□ -1.77
TRIM44-201ENST00000299413 SPRR2EP22531 72 aa3.99□□□□□ -1.77
TRIM44-201ENST00000299413 SPRR2BP35325 72 aa3.99□□□□□ -1.77
TRIM44-201ENST00000299413 SPRR2AP35326 72 aa3.99□□□□□ -1.77
TRIM44-201ENST00000299413 MT1HP80294 61 aa3.98□□□□□ -1.77
TRIM44-201ENST00000299413 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
TRIM44-201ENST00000299413 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
TRIM44-201ENST00000299413 KRTAP19-5Q3LI72 72 aa3.94□□□□□ -1.78
TRIM44-201ENST00000299413 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
TRIM44-201ENST00000299413 PLECQ15149 4684 aaKnown RBP3.89□□□□□ -1.79
TRIM44-201ENST00000299413 STARD9Q9P2P6 4700 aa3.87□□□□□ -1.79
TRIM44-201ENST00000299413 PKHD1L1Q86WI1 4243 aa3.87□□□□□ -1.79
TRIM44-201ENST00000299413 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
TRIM44-201ENST00000299413 SPRR2DP22532 72 aa3.85□□□□□ -1.79
TRIM44-201ENST00000299413 DNAH5Q8TE73 4624 aa3.85□□□□□ -1.79
TRIM44-201ENST00000299413 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
TRIM44-201ENST00000299413 MT2AP02795 61 aa3.84□□□□□ -1.79
TRIM44-201ENST00000299413 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
TRIM44-201ENST00000299413 MT1FP04733 61 aa3.81□□□□□ -1.8
TRIM44-201ENST00000299413 DNAH8Q96JB1 4490 aa3.77□□□□□ -1.81
TRIM44-201ENST00000299413 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
TRIM44-201ENST00000299413 LCE2BO14633 110 aa3.72□□□□□ -1.81
TRIM44-201ENST00000299413 DNHD1Q96M86 4753 aa3.69□□□□□ -1.82
TRIM44-201ENST00000299413 MT1GP13640 62 aa3.68□□□□□ -1.82
TRIM44-201ENST00000299413 FAT1Q14517 4588 aa3.67□□□□□ -1.82
TRIM44-201ENST00000299413 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
TRIM44-201ENST00000299413 LRP1BQ9NZR2 4599 aa3.64□□□□□ -1.83
TRIM44-201ENST00000299413 SACSQ9NZJ4 4579 aa3.62□□□□□ -1.83
TRIM44-201ENST00000299413 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
TRIM44-201ENST00000299413 RYR3Q15413 4870 aa3.62□□□□□ -1.83
TRIM44-201ENST00000299413 SPRR5A0A1B0GTR4 108 aa3.61□□□□□ -1.83
TRIM44-201ENST00000299413 APOBP04114 4563 aaKnown RBP3.6□□□□□ -1.83
TRIM44-201ENST00000299413 MT4P47944 62 aa3.58□□□□□ -1.84
TRIM44-201ENST00000299413 LCE2CQ5TA81 110 aa3.58□□□□□ -1.84
TRIM44-201ENST00000299413 PKD1P98161 4303 aa3.56□□□□□ -1.84
TRIM44-201ENST00000299413 LRP1Q07954 4544 aaKnown RBP3.55□□□□□ -1.84
TRIM44-201ENST00000299413 DYNC1H1Q14204 4646 aaKnown RBP3.55□□□□□ -1.84
TRIM44-201ENST00000299413 LCE2DQ5TA82 110 aaPredicted RBP3.53□□□□□ -1.84
TRIM44-201ENST00000299413 RYR1P21817 5038 aa3.52□□□□□ -1.85
TRIM44-201ENST00000299413 KRTAP19-1Q8IUB9 90 aa3.52□□□□□ -1.85
TRIM44-201ENST00000299413 KRTAP4-8A0A0G2JLE6 195 aa3.5□□□□□ -1.85
TRIM44-201ENST00000299413 KRTAP4-8Q9BYQ9 185 aa3.5□□□□□ -1.85
TRIM44-201ENST00000299413 KRTAP17-1Q9BYP8 105 aa3.48□□□□□ -1.85
TRIM44-201ENST00000299413 PCLOQ9Y6V0 5065 aa3.47□□□□□ -1.85
TRIM44-201ENST00000299413 FAT3Q8TDW7 4589 aa3.44□□□□□ -1.86
TRIM44-201ENST00000299413 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
TRIM44-201ENST00000299413 MT1XP80297 61 aa3.42□□□□□ -1.86
TRIM44-201ENST00000299413 TNXBP22105 4242 aa3.42□□□□□ -1.86
TRIM44-201ENST00000299413 HSPG2P98160 4391 aa3.39□□□□□ -1.87
TRIM44-201ENST00000299413 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
TRIM44-201ENST00000299413 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
TRIM44-201ENST00000299413 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
TRIM44-201ENST00000299413 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
TRIM44-201ENST00000299413 KRTAP9-2Q9BYQ4 174 aa3.34□□□□□ -1.87
TRIM44-201ENST00000299413 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
TRIM44-201ENST00000299413 LPAP08519 4548 aa3.3□□□□□ -1.88
TRIM44-201ENST00000299413 KRTAP19-8Q3LI54 63 aa3.27□□□□□ -1.89
TRIM44-201ENST00000299413 MT1BP07438 61 aa3.26□□□□□ -1.89
TRIM44-201ENST00000299413 KRTAP9-8Q9BYQ0 159 aa3.24□□□□□ -1.89
TRIM44-201ENST00000299413 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
TRIM44-201ENST00000299413 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
TRIM44-201ENST00000299413 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.9
TRIM44-201ENST00000299413 LRP2P98164 4655 aa3.18□□□□□ -1.9
TRIM44-201ENST00000299413 KRTAP9-6A0A140TA67 174 aa3.16□□□□□ -1.9
TRIM44-201ENST00000299413 LCE5AQ5TCM9 118 aa3.16□□□□□ -1.9
TRIM44-201ENST00000299413 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
TRIM44-201ENST00000299413 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
TRIM44-201ENST00000299413 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
TRIM44-201ENST00000299413 PRM1P04553 51 aa3.14□□□□□ -1.91
TRIM44-201ENST00000299413 HYDINQ4G0P3 5121 aa3.14□□□□□ -1.91
TRIM44-201ENST00000299413 MT1LQ93083 61 aa3.12□□□□□ -1.91
TRIM44-201ENST00000299413 HERC2O95714 4834 aa3.12□□□□□ -1.91
TRIM44-201ENST00000299413 MUC17Q685J3 4493 aa3.11□□□□□ -1.91
TRIM44-201ENST00000299413 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
TRIM44-201ENST00000299413 RYR2Q92736 4967 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms