RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
CPSF2-201ENST00000298875 DNAH1Q9P2D7 4330 aa2.3□□□□□ -2.04
CPSF2-201ENST00000298875 LORP23490 312 aaPredicted RBP2.3□□□□□ -2.04
CPSF2-201ENST00000298875 KRTAP10-7P60409 375 aaPredicted RBP2.3□□□□□ -2.04
CPSF2-201ENST00000298875 KRTAP4-5Q9BYR2 181 aa2.29□□□□□ -2.04
CPSF2-201ENST00000298875 DNAH11Q96DT5 4516 aa2.28□□□□□ -2.04
CPSF2-201ENST00000298875 MT3P25713 68 aa2.26□□□□□ -2.05
CPSF2-201ENST00000298875 TRRAPQ9Y4A5 3859 aa2.26□□□□□ -2.05
CPSF2-201ENST00000298875 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
CPSF2-201ENST00000298875 CUBNO60494 3623 aa2.25□□□□□ -2.05
CPSF2-201ENST00000298875 ANK2Q01484 3957 aa2.24□□□□□ -2.05
CPSF2-201ENST00000298875 ZNF469Q96JG9 3925 aaPredicted RBP2.22□□□□□ -2.05
CPSF2-201ENST00000298875 DNAH10Q8IVF4 4471 aa2.22□□□□□ -2.05
CPSF2-201ENST00000298875 DNAH6Q9C0G6 4158 aa2.21□□□□□ -2.06
CPSF2-201ENST00000298875 VPS13CQ709C8 3753 aa2.21□□□□□ -2.06
CPSF2-201ENST00000298875 COL7A1Q02388 2944 aa2.2□□□□□ -2.06
CPSF2-201ENST00000298875 DNAH3Q8TD57 4116 aa2.18□□□□□ -2.06
CPSF2-201ENST00000298875 DNAH5Q8TE73 4624 aa2.18□□□□□ -2.06
CPSF2-201ENST00000298875 DNAH17Q9UFH2 4485 aa2.17□□□□□ -2.06
CPSF2-201ENST00000298875 VPS13DQ5THJ4 4388 aa2.17□□□□□ -2.06
CPSF2-201ENST00000298875 PLECQ15149 4684 aaKnown RBP2.16□□□□□ -2.06
CPSF2-201ENST00000298875 CSMD3Q7Z407 3707 aa2.16□□□□□ -2.06
CPSF2-201ENST00000298875 MT1HP80294 61 aa2.15□□□□□ -2.06
CPSF2-201ENST00000298875 PRKDCP78527 4128 aaKnown RBP2.15□□□□□ -2.07
CPSF2-201ENST00000298875 FAT2Q9NYQ8 4349 aa2.15□□□□□ -2.07
CPSF2-201ENST00000298875 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
CPSF2-201ENST00000298875 DNAH2Q9P225 4427 aa2.14□□□□□ -2.07
CPSF2-201ENST00000298875 KRTAP19-5Q3LI72 72 aa2.14□□□□□ -2.07
CPSF2-201ENST00000298875 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
CPSF2-201ENST00000298875 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
CPSF2-201ENST00000298875 LRP1BQ9NZR2 4599 aa2.13□□□□□ -2.07
CPSF2-201ENST00000298875 DYNC2H1Q8NCM8 4307 aaKnown RBP2.13□□□□□ -2.07
CPSF2-201ENST00000298875 DNHD1Q96M86 4753 aa2.12□□□□□ -2.07
CPSF2-201ENST00000298875 KRTAP4-1Q9BYQ7 146 aa2.12□□□□□ -2.07
CPSF2-201ENST00000298875 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
CPSF2-201ENST00000298875 SACSQ9NZJ4 4579 aa2.1□□□□□ -2.07
CPSF2-201ENST00000298875 DYNC1H1Q14204 4646 aaKnown RBP2.1□□□□□ -2.07
CPSF2-201ENST00000298875 MT2AP02795 61 aa2.1□□□□□ -2.07
CPSF2-201ENST00000298875 HECTD4Q9Y4D8 3996 aa2.09□□□□□ -2.07
CPSF2-201ENST00000298875 LCE2DQ5TA82 110 aaPredicted RBP2.08□□□□□ -2.08
CPSF2-201ENST00000298875 FRAS1Q86XX4 4008 aa2.07□□□□□ -2.08
CPSF2-201ENST00000298875 FLGP20930 4061 aaPredicted RBP2.06□□□□□ -2.08
CPSF2-201ENST00000298875 LCE2CQ5TA81 110 aa2.05□□□□□ -2.08
CPSF2-201ENST00000298875 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
CPSF2-201ENST00000298875 STARD9Q9P2P6 4700 aa2.05□□□□□ -2.08
CPSF2-201ENST00000298875 MT1FP04733 61 aa2.05□□□□□ -2.08
CPSF2-201ENST00000298875 BIRC6Q9NR09 4857 aa2.04□□□□□ -2.08
CPSF2-201ENST00000298875 LCE3BQ5TA77 95 aa2.04□□□□□ -2.08
CPSF2-201ENST00000298875 DNAH8Q96JB1 4490 aa2.04□□□□□ -2.08
CPSF2-201ENST00000298875 PKHD1P08F94 4074 aa2.03□□□□□ -2.08
CPSF2-201ENST00000298875 KMT2AQ03164 3969 aa2.03□□□□□ -2.08
CPSF2-201ENST00000298875 SPRR2EP22531 72 aa2.02□□□□□ -2.09
CPSF2-201ENST00000298875 SPRR2BP35325 72 aa2.02□□□□□ -2.09
CPSF2-201ENST00000298875 SPRR2AP35326 72 aa2.02□□□□□ -2.09
CPSF2-201ENST00000298875 RYR3Q15413 4870 aa2.02□□□□□ -2.09
CPSF2-201ENST00000298875 VPS13BQ7Z7G8 4022 aa2.01□□□□□ -2.09
CPSF2-201ENST00000298875 FAT3Q8TDW7 4589 aa2.01□□□□□ -2.09
CPSF2-201ENST00000298875 KRTAP19-8Q3LI54 63 aa2□□□□□ -2.09
CPSF2-201ENST00000298875 FAT1Q14517 4588 aa1.99□□□□□ -2.09
CPSF2-201ENST00000298875 APOBP04114 4563 aaKnown RBP1.98□□□□□ -2.09
CPSF2-201ENST00000298875 SPRR2DP22532 72 aa1.98□□□□□ -2.09
CPSF2-201ENST00000298875 LYSTQ99698 3801 aa1.98□□□□□ -2.09
CPSF2-201ENST00000298875 HSPG2P98160 4391 aa1.97□□□□□ -2.09
CPSF2-201ENST00000298875 LCE2BO14633 110 aa1.96□□□□□ -2.1
CPSF2-201ENST00000298875 HERC2O95714 4834 aa1.96□□□□□ -2.1
CPSF2-201ENST00000298875 KRTAP17-1Q9BYP8 105 aa1.96□□□□□ -2.1
CPSF2-201ENST00000298875 KRTAP9-6A0A140TA67 174 aa1.96□□□□□ -2.1
CPSF2-201ENST00000298875 MT1GP13640 62 aa1.96□□□□□ -2.1
CPSF2-201ENST00000298875 KRTAP9-2Q9BYQ4 174 aa1.96□□□□□ -2.1
CPSF2-201ENST00000298875 RYR2Q92736 4967 aa1.95□□□□□ -2.1
CPSF2-201ENST00000298875 PKHD1L1Q86WI1 4243 aa1.95□□□□□ -2.1
CPSF2-201ENST00000298875 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
CPSF2-201ENST00000298875 RYR1P21817 5038 aa1.92□□□□□ -2.1
CPSF2-201ENST00000298875 HYDINQ4G0P3 5121 aa1.9□□□□□ -2.11
CPSF2-201ENST00000298875 KRTAP9-8Q9BYQ0 159 aa1.9□□□□□ -2.11
CPSF2-201ENST00000298875 LCE2AQ5TA79 106 aaPredicted RBP1.89□□□□□ -2.11
CPSF2-201ENST00000298875 MT1XP80297 61 aa1.89□□□□□ -2.11
CPSF2-201ENST00000298875 KIAA1109Q2LD37 5005 aa1.89□□□□□ -2.11
CPSF2-201ENST00000298875 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
CPSF2-201ENST00000298875 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
CPSF2-201ENST00000298875 HERC1Q15751 4861 aa1.88□□□□□ -2.11
CPSF2-201ENST00000298875 KRTAP19-1Q8IUB9 90 aa1.87□□□□□ -2.11
CPSF2-201ENST00000298875 LCE1AQ5T7P2 110 aa1.86□□□□□ -2.11
CPSF2-201ENST00000298875 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
CPSF2-201ENST00000298875 KRTAP9-3Q9BYQ3 159 aa1.84□□□□□ -2.12
CPSF2-201ENST00000298875 KMT2CQ8NEZ4 4911 aaKnown RBP1.83□□□□□ -2.12
CPSF2-201ENST00000298875 KRTAP4-8A0A0G2JLE6 195 aa1.83□□□□□ -2.12
CPSF2-201ENST00000298875 KRTAP4-8Q9BYQ9 185 aa1.83□□□□□ -2.12
CPSF2-201ENST00000298875 KRTAP9-7A8MTY7 169 aa1.82□□□□□ -2.12
CPSF2-201ENST00000298875 MUC17Q685J3 4493 aa1.82□□□□□ -2.12
CPSF2-201ENST00000298875 MT1BP07438 61 aa1.81□□□□□ -2.12
CPSF2-201ENST00000298875 PKD1P98161 4303 aa1.81□□□□□ -2.12
CPSF2-201ENST00000298875 MYCBP2O75592 4640 aa1.8□□□□□ -2.12
CPSF2-201ENST00000298875 KRTAP2-3P0C7H8 128 aa1.8□□□□□ -2.12
CPSF2-201ENST00000298875 KRTAP2-4Q9BYR9 128 aa1.8□□□□□ -2.12
CPSF2-201ENST00000298875 EPPK1P58107 5090 aaKnown RBP1.78□□□□□ -2.12
CPSF2-201ENST00000298875 ABCA13Q86UQ4 5058 aa1.78□□□□□ -2.12
CPSF2-201ENST00000298875 KRTAP20-1Q3LI63 56 aa1.78□□□□□ -2.12
CPSF2-201ENST00000298875 MT1LQ93083 61 aa1.78□□□□□ -2.12
CPSF2-201ENST00000298875 PRM1P04553 51 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 213.7 ms