RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 A0A0D9SG42 100 aa6.96□□□□□ -1.29
RPUSD4-201ENST00000298317 PKHD1P08F94 4074 aa6.94□□□□□ -1.3
RPUSD4-201ENST00000298317 LUZP6Q538Z0 58 aa6.94□□□□□ -1.3
RPUSD4-201ENST00000298317 APOBP04114 4563 aaKnown RBP6.94□□□□□ -1.3
RPUSD4-201ENST00000298317 S4R3F8 94 aa6.86□□□□□ -1.31
RPUSD4-201ENST00000298317 SMR3BP02814 79 aaPredicted RBP6.84□□□□□ -1.31
RPUSD4-201ENST00000298317 DYNC1H1Q14204 4646 aaKnown RBP6.83□□□□□ -1.32
RPUSD4-201ENST00000298317 FAT1Q14517 4588 aa6.83□□□□□ -1.32
RPUSD4-201ENST00000298317 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
RPUSD4-201ENST00000298317 KRTAP10-4P60372 401 aaPredicted RBP6.83□□□□□ -1.32
RPUSD4-201ENST00000298317 DNHD1Q96M86 4753 aa6.79□□□□□ -1.32
RPUSD4-201ENST00000298317 FAT3Q8TDW7 4589 aa6.78□□□□□ -1.32
RPUSD4-201ENST00000298317 KRTAP10-8P60410 259 aa6.78□□□□□ -1.32
RPUSD4-201ENST00000298317 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.33
RPUSD4-201ENST00000298317 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
RPUSD4-201ENST00000298317 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
RPUSD4-201ENST00000298317 XP32Q5T750 250 aa6.74□□□□□ -1.33
RPUSD4-201ENST00000298317 HSPG2P98160 4391 aa6.71□□□□□ -1.34
RPUSD4-201ENST00000298317 TNXBP22105 4242 aa6.7□□□□□ -1.34
RPUSD4-201ENST00000298317 A0A1B0GVY2 172 aa6.61□□□□□ -1.35
RPUSD4-201ENST00000298317 M0QZ58 72 aa6.61□□□□□ -1.35
RPUSD4-201ENST00000298317 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
RPUSD4-201ENST00000298317 MYCBP2O75592 4640 aa6.54□□□□□ -1.36
RPUSD4-201ENST00000298317 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
RPUSD4-201ENST00000298317 LPAP08519 4548 aa6.45□□□□□ -1.38
RPUSD4-201ENST00000298317 KMT2CQ8NEZ4 4911 aaKnown RBP6.37□□□□□ -1.39
RPUSD4-201ENST00000298317 RYR2Q92736 4967 aa6.36□□□□□ -1.39
RPUSD4-201ENST00000298317 R4GN34 69 aa6.34□□□□□ -1.39
RPUSD4-201ENST00000298317 Q5VSD8 79 aa6.33□□□□□ -1.4
RPUSD4-201ENST00000298317 LRP2P98164 4655 aa6.3□□□□□ -1.4
RPUSD4-201ENST00000298317 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
RPUSD4-201ENST00000298317 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
RPUSD4-201ENST00000298317 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
RPUSD4-201ENST00000298317 RYR1P21817 5038 aa6.21□□□□□ -1.42
RPUSD4-201ENST00000298317 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
RPUSD4-201ENST00000298317 KRTAP17-1Q9BYP8 105 aa6.17□□□□□ -1.42
RPUSD4-201ENST00000298317 MUC17Q685J3 4493 aa6.08□□□□□ -1.44
RPUSD4-201ENST00000298317 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
RPUSD4-201ENST00000298317 KRTAP21-3Q3LHN1 58 aa6□□□□□ -1.45
RPUSD4-201ENST00000298317 KIAA1109Q2LD37 5005 aa6□□□□□ -1.45
RPUSD4-201ENST00000298317 RYR3Q15413 4870 aa5.99□□□□□ -1.45
RPUSD4-201ENST00000298317 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
RPUSD4-201ENST00000298317 ABCA13Q86UQ4 5058 aa5.97□□□□□ -1.45
RPUSD4-201ENST00000298317 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
RPUSD4-201ENST00000298317 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
RPUSD4-201ENST00000298317 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
RPUSD4-201ENST00000298317 TNP1P09430 55 aa5.9□□□□□ -1.46
RPUSD4-201ENST00000298317 INE1O15225 51 aa5.82□□□□□ -1.48
RPUSD4-201ENST00000298317 HERC1Q15751 4861 aa5.76□□□□□ -1.49
RPUSD4-201ENST00000298317 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
RPUSD4-201ENST00000298317 J3QL48 77 aa5.69□□□□□ -1.5
RPUSD4-201ENST00000298317 KRTAP4-5Q9BYR2 181 aa5.69□□□□□ -1.5
RPUSD4-201ENST00000298317 EPPK1P58107 5090 aaKnown RBP5.69□□□□□ -1.5
RPUSD4-201ENST00000298317 MUC2Q02817 5179 aa5.58□□□□□ -1.52
RPUSD4-201ENST00000298317 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
RPUSD4-201ENST00000298317 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
RPUSD4-201ENST00000298317 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
RPUSD4-201ENST00000298317 BIRC6Q9NR09 4857 aa5.51□□□□□ -1.53
RPUSD4-201ENST00000298317 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
RPUSD4-201ENST00000298317 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
RPUSD4-201ENST00000298317 HERC2O95714 4834 aa5.43□□□□□ -1.54
RPUSD4-201ENST00000298317 LCE2CQ5TA81 110 aa5.38□□□□□ -1.55
RPUSD4-201ENST00000298317 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
RPUSD4-201ENST00000298317 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
RPUSD4-201ENST00000298317 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
RPUSD4-201ENST00000298317 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
RPUSD4-201ENST00000298317 MT1FP04733 61 aa5.24□□□□□ -1.57
RPUSD4-201ENST00000298317 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
RPUSD4-201ENST00000298317 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
RPUSD4-201ENST00000298317 MT2AP02795 61 aa5.22□□□□□ -1.57
RPUSD4-201ENST00000298317 UBR4Q5T4S7 5183 aa5.21□□□□□ -1.58
RPUSD4-201ENST00000298317 MT1XP80297 61 aa5.21□□□□□ -1.58
RPUSD4-201ENST00000298317 M0R2T5 61 aa5.21□□□□□ -1.58
RPUSD4-201ENST00000298317 MT1HP80294 61 aa5.2□□□□□ -1.58
RPUSD4-201ENST00000298317 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
RPUSD4-201ENST00000298317 MT1BP07438 61 aa5.16□□□□□ -1.58
RPUSD4-201ENST00000298317 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
RPUSD4-201ENST00000298317 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.59
RPUSD4-201ENST00000298317 RNF213Q63HN8 5207 aa5.01□□□□□ -1.61
RPUSD4-201ENST00000298317 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
RPUSD4-201ENST00000298317 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
RPUSD4-201ENST00000298317 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
RPUSD4-201ENST00000298317 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
RPUSD4-201ENST00000298317 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.64
RPUSD4-201ENST00000298317 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.64
RPUSD4-201ENST00000298317 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.64
RPUSD4-201ENST00000298317 KMT2DO14686 5537 aa4.71□□□□□ -1.65
RPUSD4-201ENST00000298317 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
RPUSD4-201ENST00000298317 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
RPUSD4-201ENST00000298317 LCE2BO14633 110 aa4.65□□□□□ -1.66
RPUSD4-201ENST00000298317 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
RPUSD4-201ENST00000298317 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
RPUSD4-201ENST00000298317 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
RPUSD4-201ENST00000298317 USH2AO75445 5202 aa4.57□□□□□ -1.68
RPUSD4-201ENST00000298317 MT1LQ93083 61 aa4.53□□□□□ -1.68
RPUSD4-201ENST00000298317 MT1EP04732 61 aa4.48□□□□□ -1.69
RPUSD4-201ENST00000298317 LCE2DQ5TA82 110 aaPredicted RBP4.38□□□□□ -1.71
RPUSD4-201ENST00000298317 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
RPUSD4-201ENST00000298317 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
RPUSD4-201ENST00000298317 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms