RNA–Protein interactions for RNA: ENST00000295984.7

PRRT3-201, Transcript of proline rich transmembrane protein 3, humanhuman

TSL 1 (best)

Gene PRRT3, Length 3,368 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT3-201ENST00000295984 LRP1Q07954 4544 aaKnown RBP8.05□□□□□ -1.12
PRRT3-201ENST00000295984 RPL37P61927 97 aaKnown RBP8.04□□□□□ -1.12
PRRT3-201ENST00000295984 SACSQ9NZJ4 4579 aa8.03□□□□□ -1.12
PRRT3-201ENST00000295984 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
PRRT3-201ENST00000295984 C20orf166-AS1Q96NR2 134 aa7.97□□□□□ -1.13
PRRT3-201ENST00000295984 APOBP04114 4563 aaKnown RBP7.93□□□□□ -1.14
PRRT3-201ENST00000295984 KRTAP10-6P60371 365 aaPredicted RBP7.93□□□□□ -1.14
PRRT3-201ENST00000295984 KIAA1109Q2LD37 5005 aa7.86□□□□□ -1.15
PRRT3-201ENST00000295984 Q5VSD8 79 aa7.85□□□□□ -1.15
PRRT3-201ENST00000295984 KRTAP12-2P59991 146 aa7.84□□□□□ -1.15
PRRT3-201ENST00000295984 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.16
PRRT3-201ENST00000295984 KRTAP10-8P60410 259 aa7.82□□□□□ -1.16
PRRT3-201ENST00000295984 S4R3F8 94 aa7.82□□□□□ -1.16
PRRT3-201ENST00000295984 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
PRRT3-201ENST00000295984 KRTAP15-1Q3LI76 137 aa7.77□□□□□ -1.17
PRRT3-201ENST00000295984 A0A1B0GVY2 172 aa7.76□□□□□ -1.17
PRRT3-201ENST00000295984 RYR3Q15413 4870 aa7.75□□□□□ -1.17
PRRT3-201ENST00000295984 HSPG2P98160 4391 aa7.75□□□□□ -1.17
PRRT3-201ENST00000295984 RYR2Q92736 4967 aa7.74□□□□□ -1.17
PRRT3-201ENST00000295984 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
PRRT3-201ENST00000295984 RYR1P21817 5038 aa7.7□□□□□ -1.18
PRRT3-201ENST00000295984 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
PRRT3-201ENST00000295984 KRTAP21-3Q3LHN1 58 aa7.64□□□□□ -1.19
PRRT3-201ENST00000295984 KRTAP10-4P60372 401 aaPredicted RBP7.63□□□□□ -1.19
PRRT3-201ENST00000295984 LRP2P98164 4655 aa7.62□□□□□ -1.19
PRRT3-201ENST00000295984 PKHD1L1Q86WI1 4243 aa7.61□□□□□ -1.19
PRRT3-201ENST00000295984 LPAP08519 4548 aa7.61□□□□□ -1.19
PRRT3-201ENST00000295984 KRTAP17-1Q9BYP8 105 aa7.59□□□□□ -1.2
PRRT3-201ENST00000295984 EPPK1P58107 5090 aaKnown RBP7.54□□□□□ -1.2
PRRT3-201ENST00000295984 XP32Q5T750 250 aa7.54□□□□□ -1.2
PRRT3-201ENST00000295984 M0QZ58 72 aa7.46□□□□□ -1.22
PRRT3-201ENST00000295984 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
PRRT3-201ENST00000295984 A0A0A0MQY5 61 aa7.43□□□□□ -1.22
PRRT3-201ENST00000295984 J3QL48 77 aa7.41□□□□□ -1.22
PRRT3-201ENST00000295984 ABCA13Q86UQ4 5058 aa7.4□□□□□ -1.23
PRRT3-201ENST00000295984 TNXBP22105 4242 aa7.39□□□□□ -1.23
PRRT3-201ENST00000295984 MUC2Q02817 5179 aa7.38□□□□□ -1.23
PRRT3-201ENST00000295984 R4GN34 69 aa7.38□□□□□ -1.23
PRRT3-201ENST00000295984 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
PRRT3-201ENST00000295984 LUZP6Q538Z0 58 aa7.34□□□□□ -1.23
PRRT3-201ENST00000295984 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
PRRT3-201ENST00000295984 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
PRRT3-201ENST00000295984 HERC2O95714 4834 aa7.21□□□□□ -1.26
PRRT3-201ENST00000295984 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
PRRT3-201ENST00000295984 HERC1Q15751 4861 aa7.07□□□□□ -1.28
PRRT3-201ENST00000295984 FAT4Q6V0I7 4981 aa7□□□□□ -1.29
PRRT3-201ENST00000295984 RNF213Q63HN8 5207 aa7□□□□□ -1.29
PRRT3-201ENST00000295984 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
PRRT3-201ENST00000295984 KRTAP4-1Q9BYQ7 146 aa6.97□□□□□ -1.29
PRRT3-201ENST00000295984 M0R2T5 61 aa6.84□□□□□ -1.31
PRRT3-201ENST00000295984 PCLOQ9Y6V0 5065 aa6.82□□□□□ -1.32
PRRT3-201ENST00000295984 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
PRRT3-201ENST00000295984 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
PRRT3-201ENST00000295984 TNP1P09430 55 aa6.72□□□□□ -1.33
PRRT3-201ENST00000295984 MUC17Q685J3 4493 aa6.69□□□□□ -1.34
PRRT3-201ENST00000295984 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
PRRT3-201ENST00000295984 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
PRRT3-201ENST00000295984 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
PRRT3-201ENST00000295984 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
PRRT3-201ENST00000295984 KRTAP10-10P60014 251 aa6.42□□□□□ -1.38
PRRT3-201ENST00000295984 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
PRRT3-201ENST00000295984 FLGP20930 4061 aaPredicted RBP6.4□□□□□ -1.39
PRRT3-201ENST00000295984 FSIP2Q5CZC0 6907 aa6.3□□□□□ -1.4
PRRT3-201ENST00000295984 USH2AO75445 5202 aa6.3□□□□□ -1.4
PRRT3-201ENST00000295984 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
PRRT3-201ENST00000295984 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
PRRT3-201ENST00000295984 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
PRRT3-201ENST00000295984 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
PRRT3-201ENST00000295984 MT1HP80294 61 aa6.17□□□□□ -1.42
PRRT3-201ENST00000295984 KMT2DO14686 5537 aa6.16□□□□□ -1.42
PRRT3-201ENST00000295984 MT1FP04733 61 aa6.13□□□□□ -1.43
PRRT3-201ENST00000295984 MT2AP02795 61 aa6.06□□□□□ -1.44
PRRT3-201ENST00000295984 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
PRRT3-201ENST00000295984 INE1O15225 51 aa6.02□□□□□ -1.45
PRRT3-201ENST00000295984 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
PRRT3-201ENST00000295984 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
PRRT3-201ENST00000295984 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
PRRT3-201ENST00000295984 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
PRRT3-201ENST00000295984 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
PRRT3-201ENST00000295984 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
PRRT3-201ENST00000295984 MT1XP80297 61 aa5.84□□□□□ -1.47
PRRT3-201ENST00000295984 MT1BP07438 61 aa5.78□□□□□ -1.48
PRRT3-201ENST00000295984 DSTQ03001 7570 aaKnown RBP5.7□□□□□ -1.5
PRRT3-201ENST00000295984 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
PRRT3-201ENST00000295984 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
PRRT3-201ENST00000295984 KRTAP19-5Q3LI72 72 aa5.68□□□□□ -1.5
PRRT3-201ENST00000295984 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
PRRT3-201ENST00000295984 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
PRRT3-201ENST00000295984 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
PRRT3-201ENST00000295984 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
PRRT3-201ENST00000295984 LCE2BO14633 110 aa5.6□□□□□ -1.51
PRRT3-201ENST00000295984 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
PRRT3-201ENST00000295984 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
PRRT3-201ENST00000295984 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
PRRT3-201ENST00000295984 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
PRRT3-201ENST00000295984 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
PRRT3-201ENST00000295984 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
PRRT3-201ENST00000295984 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
PRRT3-201ENST00000295984 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
PRRT3-201ENST00000295984 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms