RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 S4R3F8 94 aa7.6□□□□□ -1.19
CCT3-201ENST00000295688 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
CCT3-201ENST00000295688 XP32Q5T750 250 aa7.57□□□□□ -1.2
CCT3-201ENST00000295688 TNXBP22105 4242 aa7.55□□□□□ -1.2
CCT3-201ENST00000295688 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
CCT3-201ENST00000295688 Q5VSD8 79 aa7.51□□□□□ -1.21
CCT3-201ENST00000295688 KRTAP13-4Q3LI77 160 aa7.5□□□□□ -1.21
CCT3-201ENST00000295688 A0A0D9SG42 100 aa7.48□□□□□ -1.21
CCT3-201ENST00000295688 DMBT1Q9UGM3 2413 aaPredicted RBP7.48□□□□□ -1.21
CCT3-201ENST00000295688 HSPG2P98160 4391 aa7.47□□□□□ -1.21
CCT3-201ENST00000295688 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
CCT3-201ENST00000295688 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
CCT3-201ENST00000295688 RYR2Q92736 4967 aa7.43□□□□□ -1.22
CCT3-201ENST00000295688 P0C880 135 aa7.42□□□□□ -1.22
CCT3-201ENST00000295688 TPRXLQ17RH7 258 aa7.4□□□□□ -1.23
CCT3-201ENST00000295688 M0QZ58 72 aa7.32□□□□□ -1.24
CCT3-201ENST00000295688 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
CCT3-201ENST00000295688 KRTAP12-2P59991 146 aa7.3□□□□□ -1.24
CCT3-201ENST00000295688 KRTAP12-1P59990 96 aa7.27□□□□□ -1.24
CCT3-201ENST00000295688 SPINT4Q6UDR6 99 aa7.26□□□□□ -1.25
CCT3-201ENST00000295688 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
CCT3-201ENST00000295688 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
CCT3-201ENST00000295688 MYCBP2O75592 4640 aa7.21□□□□□ -1.25
CCT3-201ENST00000295688 KMT2CQ8NEZ4 4911 aaKnown RBP7.2□□□□□ -1.26
CCT3-201ENST00000295688 RYR1P21817 5038 aa7.19□□□□□ -1.26
CCT3-201ENST00000295688 KRTAP17-1Q9BYP8 105 aa7.19□□□□□ -1.26
CCT3-201ENST00000295688 R4GN34 69 aa7.06□□□□□ -1.28
CCT3-201ENST00000295688 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
CCT3-201ENST00000295688 LRP2P98164 4655 aa7.02□□□□□ -1.29
CCT3-201ENST00000295688 NDUFAF8A1L188 74 aa7.01□□□□□ -1.29
CCT3-201ENST00000295688 RYR3Q15413 4870 aa7□□□□□ -1.29
CCT3-201ENST00000295688 LPAP08519 4548 aa7□□□□□ -1.29
CCT3-201ENST00000295688 KIAA1109Q2LD37 5005 aa6.96□□□□□ -1.3
CCT3-201ENST00000295688 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
CCT3-201ENST00000295688 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
CCT3-201ENST00000295688 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
CCT3-201ENST00000295688 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
CCT3-201ENST00000295688 J3QL48 77 aa6.76□□□□□ -1.33
CCT3-201ENST00000295688 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
CCT3-201ENST00000295688 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
CCT3-201ENST00000295688 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
CCT3-201ENST00000295688 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
CCT3-201ENST00000295688 ABCA13Q86UQ4 5058 aa6.72□□□□□ -1.33
CCT3-201ENST00000295688 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
CCT3-201ENST00000295688 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
CCT3-201ENST00000295688 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
CCT3-201ENST00000295688 TNP1P09430 55 aa6.52□□□□□ -1.37
CCT3-201ENST00000295688 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
CCT3-201ENST00000295688 LCE2DQ5TA82 110 aaPredicted RBP6.48□□□□□ -1.37
CCT3-201ENST00000295688 HERC1Q15751 4861 aa6.45□□□□□ -1.38
CCT3-201ENST00000295688 BIRC6Q9NR09 4857 aa6.41□□□□□ -1.38
CCT3-201ENST00000295688 HERC2O95714 4834 aa6.41□□□□□ -1.38
CCT3-201ENST00000295688 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
CCT3-201ENST00000295688 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
CCT3-201ENST00000295688 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
CCT3-201ENST00000295688 LCE2CQ5TA81 110 aa6.26□□□□□ -1.41
CCT3-201ENST00000295688 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.41
CCT3-201ENST00000295688 MUC2Q02817 5179 aa6.2□□□□□ -1.42
CCT3-201ENST00000295688 M0R2T5 61 aa6.18□□□□□ -1.42
CCT3-201ENST00000295688 PCLOQ9Y6V0 5065 aa6.12□□□□□ -1.43
CCT3-201ENST00000295688 MT1HP80294 61 aa6.1□□□□□ -1.43
CCT3-201ENST00000295688 HMCN2Q8NDA2 5059 aa6.09□□□□□ -1.43
CCT3-201ENST00000295688 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
CCT3-201ENST00000295688 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
CCT3-201ENST00000295688 MT2AP02795 61 aa6.04□□□□□ -1.44
CCT3-201ENST00000295688 MT1FP04733 61 aa6.03□□□□□ -1.44
CCT3-201ENST00000295688 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
CCT3-201ENST00000295688 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
CCT3-201ENST00000295688 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
CCT3-201ENST00000295688 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
CCT3-201ENST00000295688 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
CCT3-201ENST00000295688 MT1BP07438 61 aa5.87□□□□□ -1.47
CCT3-201ENST00000295688 MT1XP80297 61 aa5.86□□□□□ -1.47
CCT3-201ENST00000295688 RNF213Q63HN8 5207 aa5.84□□□□□ -1.47
CCT3-201ENST00000295688 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
CCT3-201ENST00000295688 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
CCT3-201ENST00000295688 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
CCT3-201ENST00000295688 INE1O15225 51 aa5.77□□□□□ -1.49
CCT3-201ENST00000295688 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
CCT3-201ENST00000295688 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
CCT3-201ENST00000295688 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
CCT3-201ENST00000295688 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
CCT3-201ENST00000295688 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
CCT3-201ENST00000295688 LCE2BO14633 110 aa5.45□□□□□ -1.54
CCT3-201ENST00000295688 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
CCT3-201ENST00000295688 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
CCT3-201ENST00000295688 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
CCT3-201ENST00000295688 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
CCT3-201ENST00000295688 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
CCT3-201ENST00000295688 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
CCT3-201ENST00000295688 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.58
CCT3-201ENST00000295688 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.58
CCT3-201ENST00000295688 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
CCT3-201ENST00000295688 MT1LQ93083 61 aa5.1□□□□□ -1.59
CCT3-201ENST00000295688 KMT2DO14686 5537 aa5.09□□□□□ -1.59
CCT3-201ENST00000295688 MT1EP04732 61 aa5.08□□□□□ -1.6
CCT3-201ENST00000295688 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
CCT3-201ENST00000295688 USH2AO75445 5202 aa5.06□□□□□ -1.6
CCT3-201ENST00000295688 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
CCT3-201ENST00000295688 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms