RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 HUWE1Q7Z6Z7 4374 aaKnown RBP6.84□□□□□ -1.31
LRRC58-201ENST00000295628 ALMS1Q8TCU4 4167 aa6.84□□□□□ -1.32
LRRC58-201ENST00000295628 ANK3Q12955 4377 aaKnown RBP6.83□□□□□ -1.32
LRRC58-201ENST00000295628 KRTAP4-5Q9BYR2 181 aa6.82□□□□□ -1.32
LRRC58-201ENST00000295628 KRTAP10-7P60409 375 aaPredicted RBP6.67□□□□□ -1.34
LRRC58-201ENST00000295628 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
LRRC58-201ENST00000295628 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
LRRC58-201ENST00000295628 ZNF469Q96JG9 3925 aaPredicted RBP6.58□□□□□ -1.36
LRRC58-201ENST00000295628 SPRR2FQ96RM1 72 aa6.55□□□□□ -1.36
LRRC58-201ENST00000295628 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
LRRC58-201ENST00000295628 CMYA5Q8N3K9 4069 aa6.48□□□□□ -1.37
LRRC58-201ENST00000295628 KRTAP10-4P60372 401 aaPredicted RBP6.45□□□□□ -1.38
LRRC58-201ENST00000295628 LCE3CQ5T5A8 94 aa6.44□□□□□ -1.38
LRRC58-201ENST00000295628 DNAH3Q8TD57 4116 aa6.43□□□□□ -1.38
LRRC58-201ENST00000295628 ANK2Q01484 3957 aa6.4□□□□□ -1.38
LRRC58-201ENST00000295628 LYSTQ99698 3801 aa6.38□□□□□ -1.39
LRRC58-201ENST00000295628 DNAH7Q8WXX0 4024 aa6.34□□□□□ -1.39
LRRC58-201ENST00000295628 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.39
LRRC58-201ENST00000295628 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
LRRC58-201ENST00000295628 MT1HP80294 61 aa6.32□□□□□ -1.4
LRRC58-201ENST00000295628 VPS13BQ7Z7G8 4022 aa6.28□□□□□ -1.4
LRRC58-201ENST00000295628 KMT2AQ03164 3969 aa6.23□□□□□ -1.41
LRRC58-201ENST00000295628 DNAH6Q9C0G6 4158 aa6.21□□□□□ -1.42
LRRC58-201ENST00000295628 SPRR2EP22531 72 aa6.2□□□□□ -1.42
LRRC58-201ENST00000295628 SPRR2BP35325 72 aa6.2□□□□□ -1.42
LRRC58-201ENST00000295628 SPRR2AP35326 72 aa6.2□□□□□ -1.42
LRRC58-201ENST00000295628 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
LRRC58-201ENST00000295628 DNAH8Q96JB1 4490 aa6.18□□□□□ -1.42
LRRC58-201ENST00000295628 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
LRRC58-201ENST00000295628 MT2AP02795 61 aa6.15□□□□□ -1.42
LRRC58-201ENST00000295628 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
LRRC58-201ENST00000295628 DNAH10Q8IVF4 4471 aa6.1□□□□□ -1.43
LRRC58-201ENST00000295628 MT1FP04733 61 aa6.04□□□□□ -1.44
LRRC58-201ENST00000295628 DNAH9Q9NYC9 4486 aa6.03□□□□□ -1.44
LRRC58-201ENST00000295628 MT1GP13640 62 aa6.01□□□□□ -1.45
LRRC58-201ENST00000295628 FAT2Q9NYQ8 4349 aa5.99□□□□□ -1.45
LRRC58-201ENST00000295628 HECTD4Q9Y4D8 3996 aa5.99□□□□□ -1.45
LRRC58-201ENST00000295628 SPRR2DP22532 72 aa5.98□□□□□ -1.45
LRRC58-201ENST00000295628 LCE2BO14633 110 aa5.92□□□□□ -1.46
LRRC58-201ENST00000295628 PRKDCP78527 4128 aaKnown RBP5.87□□□□□ -1.47
LRRC58-201ENST00000295628 DNAH11Q96DT5 4516 aa5.87□□□□□ -1.47
LRRC58-201ENST00000295628 DNAH17Q9UFH2 4485 aa5.84□□□□□ -1.47
LRRC58-201ENST00000295628 LCE3DQ9BYE3 92 aa5.83□□□□□ -1.48
LRRC58-201ENST00000295628 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
LRRC58-201ENST00000295628 VPS13DQ5THJ4 4388 aa5.77□□□□□ -1.48
LRRC58-201ENST00000295628 DYNC2H1Q8NCM8 4307 aaKnown RBP5.74□□□□□ -1.49
LRRC58-201ENST00000295628 FLGP20930 4061 aaPredicted RBP5.69□□□□□ -1.5
LRRC58-201ENST00000295628 LCE3EQ5T5B0 92 aa5.67□□□□□ -1.5
LRRC58-201ENST00000295628 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
LRRC58-201ENST00000295628 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
LRRC58-201ENST00000295628 DNAH5Q8TE73 4624 aa5.59□□□□□ -1.51
LRRC58-201ENST00000295628 MT1XP80297 61 aa5.58□□□□□ -1.52
LRRC58-201ENST00000295628 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
LRRC58-201ENST00000295628 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
LRRC58-201ENST00000295628 STARD9Q9P2P6 4700 aa5.54□□□□□ -1.52
LRRC58-201ENST00000295628 LCE2DQ5TA82 110 aaPredicted RBP5.5□□□□□ -1.53
LRRC58-201ENST00000295628 PRM1P04553 51 aa5.49□□□□□ -1.53
LRRC58-201ENST00000295628 FAT1Q14517 4588 aa5.49□□□□□ -1.53
LRRC58-201ENST00000295628 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
LRRC58-201ENST00000295628 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
LRRC58-201ENST00000295628 LRP1BQ9NZR2 4599 aa5.45□□□□□ -1.54
LRRC58-201ENST00000295628 PKD1P98161 4303 aa5.45□□□□□ -1.54
LRRC58-201ENST00000295628 MT4P47944 62 aa5.44□□□□□ -1.54
LRRC58-201ENST00000295628 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
LRRC58-201ENST00000295628 LCE1BQ5T7P3 118 aa5.39□□□□□ -1.55
LRRC58-201ENST00000295628 PKHD1L1Q86WI1 4243 aa5.37□□□□□ -1.55
LRRC58-201ENST00000295628 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
LRRC58-201ENST00000295628 SACSQ9NZJ4 4579 aa5.32□□□□□ -1.56
LRRC58-201ENST00000295628 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
LRRC58-201ENST00000295628 MT1BP07438 61 aa5.29□□□□□ -1.56
LRRC58-201ENST00000295628 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
LRRC58-201ENST00000295628 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
LRRC58-201ENST00000295628 PKHD1P08F94 4074 aa5.24□□□□□ -1.57
LRRC58-201ENST00000295628 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.57
LRRC58-201ENST00000295628 KRTAP9-8Q9BYQ0 159 aa5.2□□□□□ -1.58
LRRC58-201ENST00000295628 MT1LQ93083 61 aa5.19□□□□□ -1.58
LRRC58-201ENST00000295628 MT3P25713 68 aa5.18□□□□□ -1.58
LRRC58-201ENST00000295628 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
LRRC58-201ENST00000295628 DYNC1H1Q14204 4646 aaKnown RBP5.15□□□□□ -1.59
LRRC58-201ENST00000295628 TNXBP22105 4242 aa5.14□□□□□ -1.59
LRRC58-201ENST00000295628 LPAP08519 4548 aa5.11□□□□□ -1.59
LRRC58-201ENST00000295628 FAT3Q8TDW7 4589 aa5.11□□□□□ -1.59
LRRC58-201ENST00000295628 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
LRRC58-201ENST00000295628 MT1EP04732 61 aa5.05□□□□□ -1.6
LRRC58-201ENST00000295628 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
LRRC58-201ENST00000295628 MYCBP2O75592 4640 aa5.01□□□□□ -1.61
LRRC58-201ENST00000295628 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
LRRC58-201ENST00000295628 MT1MQ8N339 61 aa4.96□□□□□ -1.62
LRRC58-201ENST00000295628 HSPG2P98160 4391 aa4.93□□□□□ -1.62
LRRC58-201ENST00000295628 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
LRRC58-201ENST00000295628 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
LRRC58-201ENST00000295628 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
LRRC58-201ENST00000295628 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
LRRC58-201ENST00000295628 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
LRRC58-201ENST00000295628 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
LRRC58-201ENST00000295628 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
LRRC58-201ENST00000295628 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
LRRC58-201ENST00000295628 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
LRRC58-201ENST00000295628 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
LRRC58-201ENST00000295628 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms