RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 LRP1Q07954 4544 aaKnown RBP9.83□□□□□ -0.84
LSM12-201ENST00000293406 HSPG2P98160 4391 aa9.81□□□□□ -0.84
LSM12-201ENST00000293406 RYR2Q92736 4967 aa9.81□□□□□ -0.84
LSM12-201ENST00000293406 CRIPTQ9P021 101 aa9.81□□□□□ -0.84
LSM12-201ENST00000293406 S4R3F8 94 aa9.79□□□□□ -0.84
LSM12-201ENST00000293406 XP32Q5T750 250 aa9.78□□□□□ -0.84
LSM12-201ENST00000293406 KRTAP13-4Q3LI77 160 aa9.78□□□□□ -0.84
LSM12-201ENST00000293406 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.84
LSM12-201ENST00000293406 ROMO1P60602 79 aa9.77□□□□□ -0.85
LSM12-201ENST00000293406 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
LSM12-201ENST00000293406 A0A0D9SG42 100 aa9.74□□□□□ -0.85
LSM12-201ENST00000293406 Q5VSD8 79 aa9.72□□□□□ -0.85
LSM12-201ENST00000293406 KMT2CQ8NEZ4 4911 aaKnown RBP9.67□□□□□ -0.86
LSM12-201ENST00000293406 P0C880 135 aa9.65□□□□□ -0.86
LSM12-201ENST00000293406 MYCBP2O75592 4640 aa9.65□□□□□ -0.86
LSM12-201ENST00000293406 H3BS24 57 aa9.59□□□□□ -0.87
LSM12-201ENST00000293406 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
LSM12-201ENST00000293406 KRTAP12-2P59991 146 aa9.49□□□□□ -0.89
LSM12-201ENST00000293406 MT1HL1P0DM35 61 aa9.47□□□□□ -0.89
LSM12-201ENST00000293406 KRTAP17-1Q9BYP8 105 aa9.46□□□□□ -0.9
LSM12-201ENST00000293406 RYR1P21817 5038 aa9.45□□□□□ -0.9
LSM12-201ENST00000293406 C10orf95Q9H7T3 257 aa9.43□□□□□ -0.9
LSM12-201ENST00000293406 LPAP08519 4548 aa9.42□□□□□ -0.9
LSM12-201ENST00000293406 KRTAP12-1P59990 96 aa9.41□□□□□ -0.9
LSM12-201ENST00000293406 SPINT4Q6UDR6 99 aa9.41□□□□□ -0.9
LSM12-201ENST00000293406 M0QZ58 72 aa9.35□□□□□ -0.91
LSM12-201ENST00000293406 LRP2P98164 4655 aa9.32□□□□□ -0.92
LSM12-201ENST00000293406 RYR3Q15413 4870 aa9.31□□□□□ -0.92
LSM12-201ENST00000293406 KIAA1109Q2LD37 5005 aa9.27□□□□□ -0.92
LSM12-201ENST00000293406 KRTAP15-1Q3LI76 137 aa9.14□□□□□ -0.95
LSM12-201ENST00000293406 R4GN34 69 aa9.1□□□□□ -0.95
LSM12-201ENST00000293406 ABCA13Q86UQ4 5058 aa9.03□□□□□ -0.96
LSM12-201ENST00000293406 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
LSM12-201ENST00000293406 NDUFAF8A1L188 74 aa8.98□□□□□ -0.97
LSM12-201ENST00000293406 EPPK1P58107 5090 aaKnown RBP8.95□□□□□ -0.98
LSM12-201ENST00000293406 MUC17Q685J3 4493 aa8.95□□□□□ -0.98
LSM12-201ENST00000293406 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
LSM12-201ENST00000293406 KRTAP4-5Q9BYR2 181 aa8.93□□□□□ -0.98
LSM12-201ENST00000293406 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
LSM12-201ENST00000293406 KRTAP19-2Q3LHN2 52 aa8.72□□□□□ -1.01
LSM12-201ENST00000293406 J3QL48 77 aa8.71□□□□□ -1.01
LSM12-201ENST00000293406 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
LSM12-201ENST00000293406 CAMK2N1Q7Z7J9 78 aa8.67□□□□□ -1.02
LSM12-201ENST00000293406 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
LSM12-201ENST00000293406 HERC2O95714 4834 aa8.52□□□□□ -1.05
LSM12-201ENST00000293406 FLGP20930 4061 aaPredicted RBP8.47□□□□□ -1.05
LSM12-201ENST00000293406 MUC2Q02817 5179 aa8.45□□□□□ -1.06
LSM12-201ENST00000293406 BIRC6Q9NR09 4857 aa8.37□□□□□ -1.07
LSM12-201ENST00000293406 TNP1P09430 55 aa8.36□□□□□ -1.07
LSM12-201ENST00000293406 LUZP6Q538Z0 58 aa8.35□□□□□ -1.07
LSM12-201ENST00000293406 HERC1Q15751 4861 aa8.31□□□□□ -1.08
LSM12-201ENST00000293406 KRTAP23-1A1A580 65 aa8.26□□□□□ -1.09
LSM12-201ENST00000293406 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
LSM12-201ENST00000293406 A0A0A0MQY5 61 aa8.22□□□□□ -1.09
LSM12-201ENST00000293406 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
LSM12-201ENST00000293406 SPRR2GQ9BYE4 73 aa8.12□□□□□ -1.11
LSM12-201ENST00000293406 HMCN2Q8NDA2 5059 aa8.08□□□□□ -1.12
LSM12-201ENST00000293406 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
LSM12-201ENST00000293406 SPRR5A0A1B0GTR4 108 aa8.06□□□□□ -1.12
LSM12-201ENST00000293406 FAT4Q6V0I7 4981 aa8.05□□□□□ -1.12
LSM12-201ENST00000293406 M0R2T5 61 aa8.01□□□□□ -1.13
LSM12-201ENST00000293406 MT1HP80294 61 aa7.91□□□□□ -1.14
LSM12-201ENST00000293406 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
LSM12-201ENST00000293406 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
LSM12-201ENST00000293406 MT1FP04733 61 aa7.84□□□□□ -1.15
LSM12-201ENST00000293406 MT2AP02795 61 aa7.83□□□□□ -1.16
LSM12-201ENST00000293406 KRTAP9-8Q9BYQ0 159 aa7.76□□□□□ -1.17
LSM12-201ENST00000293406 RNF213Q63HN8 5207 aa7.74□□□□□ -1.17
LSM12-201ENST00000293406 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
LSM12-201ENST00000293406 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
LSM12-201ENST00000293406 UBR4Q5T4S7 5183 aa7.67□□□□□ -1.18
LSM12-201ENST00000293406 KRTAP10-5P60370 271 aa7.62□□□□□ -1.19
LSM12-201ENST00000293406 MT1BP07438 61 aa7.62□□□□□ -1.19
LSM12-201ENST00000293406 MT1XP80297 61 aa7.61□□□□□ -1.19
LSM12-201ENST00000293406 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
LSM12-201ENST00000293406 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
LSM12-201ENST00000293406 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
LSM12-201ENST00000293406 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
LSM12-201ENST00000293406 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
LSM12-201ENST00000293406 INE1O15225 51 aa7.22□□□□□ -1.25
LSM12-201ENST00000293406 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
LSM12-201ENST00000293406 LCE2BO14633 110 aa7.1□□□□□ -1.27
LSM12-201ENST00000293406 LCE3CQ5T5A8 94 aa7.07□□□□□ -1.28
LSM12-201ENST00000293406 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
LSM12-201ENST00000293406 USH2AO75445 5202 aa6.93□□□□□ -1.3
LSM12-201ENST00000293406 KMT2DO14686 5537 aa6.92□□□□□ -1.3
LSM12-201ENST00000293406 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
LSM12-201ENST00000293406 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
LSM12-201ENST00000293406 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
LSM12-201ENST00000293406 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
LSM12-201ENST00000293406 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
LSM12-201ENST00000293406 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
LSM12-201ENST00000293406 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
LSM12-201ENST00000293406 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
LSM12-201ENST00000293406 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
LSM12-201ENST00000293406 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
LSM12-201ENST00000293406 MT1LQ93083 61 aa6.59□□□□□ -1.35
LSM12-201ENST00000293406 MT1EP04732 61 aa6.57□□□□□ -1.36
LSM12-201ENST00000293406 SSPOA2VEC9 5147 aa6.45□□□□□ -1.38
LSM12-201ENST00000293406 KRTAP9-2Q9BYQ4 174 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms