RNA–Protein interactions for RNA: ENST00000292408.8

FGFR4-201, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene FGFR4, Length 3,122 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-201ENST00000292408 HSPG2P98160 4391 aa8.56□□□□□ -1.04
FGFR4-201ENST00000292408 K7ERS5 55 aa8.55□□□□□ -1.04
FGFR4-201ENST00000292408 C10orf95Q9H7T3 257 aa8.54□□□□□ -1.04
FGFR4-201ENST00000292408 KRTAP10-4P60372 401 aaPredicted RBP8.54□□□□□ -1.04
FGFR4-201ENST00000292408 PKHD1L1Q86WI1 4243 aa8.51□□□□□ -1.05
FGFR4-201ENST00000292408 KRTAP13-4Q3LI77 160 aa8.51□□□□□ -1.05
FGFR4-201ENST00000292408 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
FGFR4-201ENST00000292408 KMT2CQ8NEZ4 4911 aaKnown RBP8.48□□□□□ -1.05
FGFR4-201ENST00000292408 FAT3Q8TDW7 4589 aa8.44□□□□□ -1.06
FGFR4-201ENST00000292408 TPRXLQ17RH7 258 aa8.44□□□□□ -1.06
FGFR4-201ENST00000292408 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
FGFR4-201ENST00000292408 A0A1B0GVY2 172 aa8.43□□□□□ -1.06
FGFR4-201ENST00000292408 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
FGFR4-201ENST00000292408 RPL37P61927 97 aaKnown RBP8.4□□□□□ -1.07
FGFR4-201ENST00000292408 S4R3F8 94 aa8.36□□□□□ -1.07
FGFR4-201ENST00000292408 LPAP08519 4548 aa8.35□□□□□ -1.07
FGFR4-201ENST00000292408 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
FGFR4-201ENST00000292408 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
FGFR4-201ENST00000292408 RYR2Q92736 4967 aa8.32□□□□□ -1.08
FGFR4-201ENST00000292408 XP32Q5T750 250 aa8.32□□□□□ -1.08
FGFR4-201ENST00000292408 TNXBP22105 4242 aa8.3□□□□□ -1.08
FGFR4-201ENST00000292408 Q5VSD8 79 aa8.29□□□□□ -1.08
FGFR4-201ENST00000292408 LRP2P98164 4655 aa8.26□□□□□ -1.09
FGFR4-201ENST00000292408 KIAA1109Q2LD37 5005 aa8.24□□□□□ -1.09
FGFR4-201ENST00000292408 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
FGFR4-201ENST00000292408 LUZP6Q538Z0 58 aa8.23□□□□□ -1.09
FGFR4-201ENST00000292408 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.09
FGFR4-201ENST00000292408 RYR3Q15413 4870 aa8.13□□□□□ -1.11
FGFR4-201ENST00000292408 RYR1P21817 5038 aa8.11□□□□□ -1.11
FGFR4-201ENST00000292408 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
FGFR4-201ENST00000292408 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
FGFR4-201ENST00000292408 ABCA13Q86UQ4 5058 aa7.99□□□□□ -1.13
FGFR4-201ENST00000292408 M0QZ58 72 aa7.95□□□□□ -1.14
FGFR4-201ENST00000292408 R4GN34 69 aa7.86□□□□□ -1.15
FGFR4-201ENST00000292408 EPPK1P58107 5090 aaKnown RBP7.85□□□□□ -1.15
FGFR4-201ENST00000292408 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
FGFR4-201ENST00000292408 KRTAP21-3Q3LHN1 58 aa7.83□□□□□ -1.16
FGFR4-201ENST00000292408 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
FGFR4-201ENST00000292408 MUC2Q02817 5179 aa7.75□□□□□ -1.17
FGFR4-201ENST00000292408 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
FGFR4-201ENST00000292408 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
FGFR4-201ENST00000292408 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
FGFR4-201ENST00000292408 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
FGFR4-201ENST00000292408 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
FGFR4-201ENST00000292408 J3QL48 77 aa7.49□□□□□ -1.21
FGFR4-201ENST00000292408 HERC2O95714 4834 aa7.46□□□□□ -1.22
FGFR4-201ENST00000292408 FAT4Q6V0I7 4981 aa7.35□□□□□ -1.23
FGFR4-201ENST00000292408 KRTAP19-2Q3LHN2 52 aa7.29□□□□□ -1.24
FGFR4-201ENST00000292408 PCLOQ9Y6V0 5065 aa7.28□□□□□ -1.24
FGFR4-201ENST00000292408 HERC1Q15751 4861 aa7.26□□□□□ -1.25
FGFR4-201ENST00000292408 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
FGFR4-201ENST00000292408 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
FGFR4-201ENST00000292408 RNF213Q63HN8 5207 aa7.14□□□□□ -1.27
FGFR4-201ENST00000292408 TNP1P09430 55 aa7.13□□□□□ -1.27
FGFR4-201ENST00000292408 BIRC6Q9NR09 4857 aa7.04□□□□□ -1.28
FGFR4-201ENST00000292408 M0R2T5 61 aa7.03□□□□□ -1.28
FGFR4-201ENST00000292408 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
FGFR4-201ENST00000292408 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
FGFR4-201ENST00000292408 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.3
FGFR4-201ENST00000292408 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
FGFR4-201ENST00000292408 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
FGFR4-201ENST00000292408 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
FGFR4-201ENST00000292408 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
FGFR4-201ENST00000292408 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
FGFR4-201ENST00000292408 MT1FP04733 61 aa6.71□□□□□ -1.34
FGFR4-201ENST00000292408 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
FGFR4-201ENST00000292408 MT1HP80294 61 aa6.68□□□□□ -1.34
FGFR4-201ENST00000292408 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
FGFR4-201ENST00000292408 MT2AP02795 61 aa6.65□□□□□ -1.34
FGFR4-201ENST00000292408 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
FGFR4-201ENST00000292408 INE1O15225 51 aa6.53□□□□□ -1.36
FGFR4-201ENST00000292408 USH2AO75445 5202 aa6.5□□□□□ -1.37
FGFR4-201ENST00000292408 KMT2DO14686 5537 aa6.47□□□□□ -1.37
FGFR4-201ENST00000292408 KRTAP10-5P60370 271 aa6.47□□□□□ -1.37
FGFR4-201ENST00000292408 MT1XP80297 61 aa6.46□□□□□ -1.38
FGFR4-201ENST00000292408 MT1BP07438 61 aa6.45□□□□□ -1.38
FGFR4-201ENST00000292408 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
FGFR4-201ENST00000292408 KRTAP10-7P60409 375 aaPredicted RBP6.43□□□□□ -1.38
FGFR4-201ENST00000292408 KRTAP8-1Q8IUC2 63 aa6.42□□□□□ -1.38
FGFR4-201ENST00000292408 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
FGFR4-201ENST00000292408 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
FGFR4-201ENST00000292408 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
FGFR4-201ENST00000292408 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
FGFR4-201ENST00000292408 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
FGFR4-201ENST00000292408 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
FGFR4-201ENST00000292408 LCE2BO14633 110 aa6.07□□□□□ -1.44
FGFR4-201ENST00000292408 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
FGFR4-201ENST00000292408 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
FGFR4-201ENST00000292408 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
FGFR4-201ENST00000292408 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
FGFR4-201ENST00000292408 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
FGFR4-201ENST00000292408 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
FGFR4-201ENST00000292408 SSPOA2VEC9 5147 aa5.65□□□□□ -1.5
FGFR4-201ENST00000292408 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
FGFR4-201ENST00000292408 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
FGFR4-201ENST00000292408 CRCT1Q9UGL9 99 aa5.59□□□□□ -1.51
FGFR4-201ENST00000292408 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.52
FGFR4-201ENST00000292408 MT1LQ93083 61 aa5.58□□□□□ -1.52
FGFR4-201ENST00000292408 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
FGFR4-201ENST00000292408 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms