RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
ACTC1-201ENST00000290378 DNAH2Q9P225 4427 aa5.64□□□□□ -1.51
ACTC1-201ENST00000290378 DNAH17Q9UFH2 4485 aa5.64□□□□□ -1.51
ACTC1-201ENST00000290378 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
ACTC1-201ENST00000290378 DYNC1H1Q14204 4646 aaKnown RBP5.63□□□□□ -1.51
ACTC1-201ENST00000290378 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
ACTC1-201ENST00000290378 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
ACTC1-201ENST00000290378 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
ACTC1-201ENST00000290378 KIAA1109Q2LD37 5005 aa5.6□□□□□ -1.51
ACTC1-201ENST00000290378 M0R2T5 61 aa5.59□□□□□ -1.52
ACTC1-201ENST00000290378 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.52
ACTC1-201ENST00000290378 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
ACTC1-201ENST00000290378 DYNC2H1Q8NCM8 4307 aaKnown RBP5.58□□□□□ -1.52
ACTC1-201ENST00000290378 ALMS1Q8TCU4 4167 aa5.57□□□□□ -1.52
ACTC1-201ENST00000290378 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
ACTC1-201ENST00000290378 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
ACTC1-201ENST00000290378 PKHD1P08F94 4074 aa5.54□□□□□ -1.52
ACTC1-201ENST00000290378 KMT2CQ8NEZ4 4911 aaKnown RBP5.53□□□□□ -1.52
ACTC1-201ENST00000290378 VPS13BQ7Z7G8 4022 aa5.52□□□□□ -1.53
ACTC1-201ENST00000290378 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
ACTC1-201ENST00000290378 HECTD4Q9Y4D8 3996 aa5.51□□□□□ -1.53
ACTC1-201ENST00000290378 RYR1P21817 5038 aa5.5□□□□□ -1.53
ACTC1-201ENST00000290378 SACSQ9NZJ4 4579 aa5.49□□□□□ -1.53
ACTC1-201ENST00000290378 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
ACTC1-201ENST00000290378 RYR3Q15413 4870 aa5.47□□□□□ -1.53
ACTC1-201ENST00000290378 LRP1Q07954 4544 aaKnown RBP5.47□□□□□ -1.53
ACTC1-201ENST00000290378 KRTAP12-1P59990 96 aa5.46□□□□□ -1.53
ACTC1-201ENST00000290378 FAT3Q8TDW7 4589 aa5.45□□□□□ -1.54
ACTC1-201ENST00000290378 APOBP04114 4563 aaKnown RBP5.44□□□□□ -1.54
ACTC1-201ENST00000290378 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
ACTC1-201ENST00000290378 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
ACTC1-201ENST00000290378 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
ACTC1-201ENST00000290378 RYR2Q92736 4967 aa5.38□□□□□ -1.55
ACTC1-201ENST00000290378 KRTAP17-1Q9BYP8 105 aa5.37□□□□□ -1.55
ACTC1-201ENST00000290378 PKD1P98161 4303 aa5.27□□□□□ -1.57
ACTC1-201ENST00000290378 EPPK1P58107 5090 aaKnown RBP5.2□□□□□ -1.58
ACTC1-201ENST00000290378 LRP2P98164 4655 aa5.18□□□□□ -1.58
ACTC1-201ENST00000290378 HSPG2P98160 4391 aa5.16□□□□□ -1.58
ACTC1-201ENST00000290378 HERC2O95714 4834 aa5.15□□□□□ -1.58
ACTC1-201ENST00000290378 TNP1P09430 55 aa5.14□□□□□ -1.59
ACTC1-201ENST00000290378 LORP23490 312 aaPredicted RBP5.11□□□□□ -1.59
ACTC1-201ENST00000290378 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
ACTC1-201ENST00000290378 KRTAP10-10P60014 251 aa5.07□□□□□ -1.6
ACTC1-201ENST00000290378 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
ACTC1-201ENST00000290378 LPAP08519 4548 aa5.04□□□□□ -1.6
ACTC1-201ENST00000290378 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
ACTC1-201ENST00000290378 PKHD1L1Q86WI1 4243 aa4.94□□□□□ -1.62
ACTC1-201ENST00000290378 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.62
ACTC1-201ENST00000290378 MUC2Q02817 5179 aa4.86□□□□□ -1.63
ACTC1-201ENST00000290378 TNXBP22105 4242 aa4.86□□□□□ -1.63
ACTC1-201ENST00000290378 HERC1Q15751 4861 aa4.86□□□□□ -1.63
ACTC1-201ENST00000290378 RNF213Q63HN8 5207 aa4.81□□□□□ -1.64
ACTC1-201ENST00000290378 PRO2289Q9P1D8 64 aa4.79□□□□□ -1.64
ACTC1-201ENST00000290378 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
ACTC1-201ENST00000290378 UBR4Q5T4S7 5183 aa4.69□□□□□ -1.66
ACTC1-201ENST00000290378 FAT4Q6V0I7 4981 aa4.68□□□□□ -1.66
ACTC1-201ENST00000290378 MT1HP80294 61 aa4.65□□□□□ -1.67
ACTC1-201ENST00000290378 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
ACTC1-201ENST00000290378 INE1O15225 51 aa4.61□□□□□ -1.67
ACTC1-201ENST00000290378 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
ACTC1-201ENST00000290378 MT2AP02795 61 aa4.55□□□□□ -1.68
ACTC1-201ENST00000290378 MT1FP04733 61 aa4.55□□□□□ -1.68
ACTC1-201ENST00000290378 HMCN2Q8NDA2 5059 aa4.51□□□□□ -1.69
ACTC1-201ENST00000290378 LCE2CQ5TA81 110 aa4.49□□□□□ -1.69
ACTC1-201ENST00000290378 KRTAP19-2Q3LHN2 52 aa4.46□□□□□ -1.69
ACTC1-201ENST00000290378 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
ACTC1-201ENST00000290378 MUC17Q685J3 4493 aa4.43□□□□□ -1.7
ACTC1-201ENST00000290378 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
ACTC1-201ENST00000290378 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
ACTC1-201ENST00000290378 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.71
ACTC1-201ENST00000290378 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
ACTC1-201ENST00000290378 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
ACTC1-201ENST00000290378 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
ACTC1-201ENST00000290378 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
ACTC1-201ENST00000290378 MT1BP07438 61 aa4.22□□□□□ -1.73
ACTC1-201ENST00000290378 USH2AO75445 5202 aa4.21□□□□□ -1.73
ACTC1-201ENST00000290378 CRCT1Q9UGL9 99 aa4.2□□□□□ -1.74
ACTC1-201ENST00000290378 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
ACTC1-201ENST00000290378 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
ACTC1-201ENST00000290378 KRTAP9-3Q9BYQ3 159 aa4.18□□□□□ -1.74
ACTC1-201ENST00000290378 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
ACTC1-201ENST00000290378 MT1XP80297 61 aa4.16□□□□□ -1.74
ACTC1-201ENST00000290378 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
ACTC1-201ENST00000290378 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
ACTC1-201ENST00000290378 LCE2BO14633 110 aa4.13□□□□□ -1.75
ACTC1-201ENST00000290378 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
ACTC1-201ENST00000290378 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
ACTC1-201ENST00000290378 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
ACTC1-201ENST00000290378 KMT2DO14686 5537 aa4.02□□□□□ -1.77
ACTC1-201ENST00000290378 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
ACTC1-201ENST00000290378 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
ACTC1-201ENST00000290378 LCE2AQ5TA79 106 aaPredicted RBP4□□□□□ -1.77
ACTC1-201ENST00000290378 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
ACTC1-201ENST00000290378 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
ACTC1-201ENST00000290378 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.79
ACTC1-201ENST00000290378 FCGBPQ9Y6R7 5405 aaPredicted RBP3.86□□□□□ -1.79
ACTC1-201ENST00000290378 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
ACTC1-201ENST00000290378 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
ACTC1-201ENST00000290378 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
ACTC1-201ENST00000290378 MT1GP13640 62 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms