RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
SLC28A1-201ENST00000286749 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
SLC28A1-201ENST00000286749 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
SLC28A1-201ENST00000286749 LRP1Q07954 4544 aaKnown RBP6.8□□□□□ -1.32
SLC28A1-201ENST00000286749 RPL37P61927 97 aaKnown RBP6.79□□□□□ -1.32
SLC28A1-201ENST00000286749 KIAA1109Q2LD37 5005 aa6.78□□□□□ -1.32
SLC28A1-201ENST00000286749 KRTAP10-8P60410 259 aa6.78□□□□□ -1.32
SLC28A1-201ENST00000286749 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
SLC28A1-201ENST00000286749 TNXBP22105 4242 aa6.76□□□□□ -1.33
SLC28A1-201ENST00000286749 HSPG2P98160 4391 aa6.75□□□□□ -1.33
SLC28A1-201ENST00000286749 XP32Q5T750 250 aa6.75□□□□□ -1.33
SLC28A1-201ENST00000286749 A0A0D9SG42 100 aa6.75□□□□□ -1.33
SLC28A1-201ENST00000286749 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
SLC28A1-201ENST00000286749 S4R3F8 94 aa6.74□□□□□ -1.33
SLC28A1-201ENST00000286749 ROMO1P60602 79 aa6.73□□□□□ -1.33
SLC28A1-201ENST00000286749 Q5VSD8 79 aa6.71□□□□□ -1.33
SLC28A1-201ENST00000286749 RYR1P21817 5038 aa6.71□□□□□ -1.34
SLC28A1-201ENST00000286749 BIRC6Q9NR09 4857 aa6.71□□□□□ -1.34
SLC28A1-201ENST00000286749 P0C880 135 aa6.67□□□□□ -1.34
SLC28A1-201ENST00000286749 MYCBP2O75592 4640 aa6.65□□□□□ -1.34
SLC28A1-201ENST00000286749 KRTAP17-1Q9BYP8 105 aa6.65□□□□□ -1.34
SLC28A1-201ENST00000286749 H3BS24 57 aa6.63□□□□□ -1.35
SLC28A1-201ENST00000286749 TPRXLQ17RH7 258 aa6.59□□□□□ -1.36
SLC28A1-201ENST00000286749 HERC2O95714 4834 aa6.58□□□□□ -1.36
SLC28A1-201ENST00000286749 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
SLC28A1-201ENST00000286749 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
SLC28A1-201ENST00000286749 C10orf95Q9H7T3 257 aa6.54□□□□□ -1.36
SLC28A1-201ENST00000286749 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
SLC28A1-201ENST00000286749 ABCA13Q86UQ4 5058 aa6.51□□□□□ -1.37
SLC28A1-201ENST00000286749 SPINT4Q6UDR6 99 aa6.5□□□□□ -1.37
SLC28A1-201ENST00000286749 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
SLC28A1-201ENST00000286749 LPAP08519 4548 aa6.48□□□□□ -1.37
SLC28A1-201ENST00000286749 LRP2P98164 4655 aa6.45□□□□□ -1.38
SLC28A1-201ENST00000286749 PCLOQ9Y6V0 5065 aa6.44□□□□□ -1.38
SLC28A1-201ENST00000286749 M0QZ58 72 aa6.41□□□□□ -1.38
SLC28A1-201ENST00000286749 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
SLC28A1-201ENST00000286749 R4GN34 69 aa6.27□□□□□ -1.41
SLC28A1-201ENST00000286749 HERC1Q15751 4861 aa6.25□□□□□ -1.41
SLC28A1-201ENST00000286749 NDUFAF8A1L188 74 aa6.2□□□□□ -1.42
SLC28A1-201ENST00000286749 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
SLC28A1-201ENST00000286749 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
SLC28A1-201ENST00000286749 J3QL48 77 aa6.15□□□□□ -1.42
SLC28A1-201ENST00000286749 MUC17Q685J3 4493 aa6.15□□□□□ -1.42
SLC28A1-201ENST00000286749 KRTAP4-1Q9BYQ7 146 aa6.15□□□□□ -1.43
SLC28A1-201ENST00000286749 HMCN2Q8NDA2 5059 aa6.04□□□□□ -1.44
SLC28A1-201ENST00000286749 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
SLC28A1-201ENST00000286749 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
SLC28A1-201ENST00000286749 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
SLC28A1-201ENST00000286749 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
SLC28A1-201ENST00000286749 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
SLC28A1-201ENST00000286749 MUC2Q02817 5179 aa5.84□□□□□ -1.47
SLC28A1-201ENST00000286749 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
SLC28A1-201ENST00000286749 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
SLC28A1-201ENST00000286749 TNP1P09430 55 aa5.74□□□□□ -1.49
SLC28A1-201ENST00000286749 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
SLC28A1-201ENST00000286749 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
SLC28A1-201ENST00000286749 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
SLC28A1-201ENST00000286749 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.52
SLC28A1-201ENST00000286749 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
SLC28A1-201ENST00000286749 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
SLC28A1-201ENST00000286749 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
SLC28A1-201ENST00000286749 M0R2T5 61 aa5.52□□□□□ -1.53
SLC28A1-201ENST00000286749 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
SLC28A1-201ENST00000286749 MT1HP80294 61 aa5.46□□□□□ -1.54
SLC28A1-201ENST00000286749 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
SLC28A1-201ENST00000286749 MT1FP04733 61 aa5.43□□□□□ -1.54
SLC28A1-201ENST00000286749 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
SLC28A1-201ENST00000286749 MT2AP02795 61 aa5.42□□□□□ -1.54
SLC28A1-201ENST00000286749 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
SLC28A1-201ENST00000286749 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
SLC28A1-201ENST00000286749 KRTAP8-1Q8IUC2 63 aa5.28□□□□□ -1.56
SLC28A1-201ENST00000286749 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
SLC28A1-201ENST00000286749 MT1BP07438 61 aa5.27□□□□□ -1.57
SLC28A1-201ENST00000286749 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
SLC28A1-201ENST00000286749 MT1XP80297 61 aa5.26□□□□□ -1.57
SLC28A1-201ENST00000286749 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
SLC28A1-201ENST00000286749 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
SLC28A1-201ENST00000286749 KRTAP10-7P60409 375 aaPredicted RBP5.13□□□□□ -1.59
SLC28A1-201ENST00000286749 KRTAP9-3Q9BYQ3 159 aa5.11□□□□□ -1.59
SLC28A1-201ENST00000286749 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
SLC28A1-201ENST00000286749 INE1O15225 51 aa4.94□□□□□ -1.62
SLC28A1-201ENST00000286749 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
SLC28A1-201ENST00000286749 LCE2BO14633 110 aa4.92□□□□□ -1.62
SLC28A1-201ENST00000286749 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
SLC28A1-201ENST00000286749 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
SLC28A1-201ENST00000286749 USH2AO75445 5202 aa4.86□□□□□ -1.63
SLC28A1-201ENST00000286749 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
SLC28A1-201ENST00000286749 LCE2DQ5TA82 110 aaPredicted RBP4.84□□□□□ -1.63
SLC28A1-201ENST00000286749 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
SLC28A1-201ENST00000286749 KMT2DO14686 5537 aa4.8□□□□□ -1.64
SLC28A1-201ENST00000286749 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
SLC28A1-201ENST00000286749 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
SLC28A1-201ENST00000286749 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
SLC28A1-201ENST00000286749 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
SLC28A1-201ENST00000286749 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
SLC28A1-201ENST00000286749 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
SLC28A1-201ENST00000286749 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
SLC28A1-201ENST00000286749 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
SLC28A1-201ENST00000286749 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
SLC28A1-201ENST00000286749 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms