RNA–Protein interactions for RNA: ENST00000285106.10

CXXC1-201, Transcript of CXXC finger protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXXC1, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-201ENST00000285106 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
CXXC1-201ENST00000285106 TNXBP22105 4242 aa8.74□□□□□ -1.01
CXXC1-201ENST00000285106 K7ERS5 55 aa8.74□□□□□ -1.01
CXXC1-201ENST00000285106 Q5VSD8 79 aa8.71□□□□□ -1.01
CXXC1-201ENST00000285106 HSPG2P98160 4391 aa8.71□□□□□ -1.02
CXXC1-201ENST00000285106 KRTAP10-8P60410 259 aa8.71□□□□□ -1.02
CXXC1-201ENST00000285106 MYCBP2O75592 4640 aa8.67□□□□□ -1.02
CXXC1-201ENST00000285106 KRTAP10-6P60371 365 aaPredicted RBP8.62□□□□□ -1.03
CXXC1-201ENST00000285106 KRTAP13-4Q3LI77 160 aa8.61□□□□□ -1.03
CXXC1-201ENST00000285106 RPL37P61927 97 aaKnown RBP8.59□□□□□ -1.03
CXXC1-201ENST00000285106 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
CXXC1-201ENST00000285106 RYR3Q15413 4870 aa8.57□□□□□ -1.04
CXXC1-201ENST00000285106 P0C880 135 aa8.57□□□□□ -1.04
CXXC1-201ENST00000285106 RYR1P21817 5038 aa8.57□□□□□ -1.04
CXXC1-201ENST00000285106 A0A0D9SG42 100 aa8.56□□□□□ -1.04
CXXC1-201ENST00000285106 XP32Q5T750 250 aa8.56□□□□□ -1.04
CXXC1-201ENST00000285106 KRTAP17-1Q9BYP8 105 aa8.53□□□□□ -1.04
CXXC1-201ENST00000285106 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
CXXC1-201ENST00000285106 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
CXXC1-201ENST00000285106 KIAA1109Q2LD37 5005 aa8.5□□□□□ -1.05
CXXC1-201ENST00000285106 MT1HL1P0DM35 61 aa8.44□□□□□ -1.06
CXXC1-201ENST00000285106 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
CXXC1-201ENST00000285106 S4R3F8 94 aa8.41□□□□□ -1.06
CXXC1-201ENST00000285106 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.06
CXXC1-201ENST00000285106 KRTAP12-2P59991 146 aa8.34□□□□□ -1.07
CXXC1-201ENST00000285106 LRP2P98164 4655 aa8.32□□□□□ -1.08
CXXC1-201ENST00000285106 LPAP08519 4548 aa8.32□□□□□ -1.08
CXXC1-201ENST00000285106 EPPK1P58107 5090 aaKnown RBP8.27□□□□□ -1.09
CXXC1-201ENST00000285106 KRTAP15-1Q3LI76 137 aa8.24□□□□□ -1.09
CXXC1-201ENST00000285106 KRTAP12-1P59990 96 aa8.24□□□□□ -1.09
CXXC1-201ENST00000285106 NDUFAF8A1L188 74 aa8.18□□□□□ -1.1
CXXC1-201ENST00000285106 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
CXXC1-201ENST00000285106 KRTAP4-5Q9BYR2 181 aa8.14□□□□□ -1.11
CXXC1-201ENST00000285106 M0QZ58 72 aa8.06□□□□□ -1.12
CXXC1-201ENST00000285106 SEC61BP60468 96 aaKnown RBP7.96□□□□□ -1.14
CXXC1-201ENST00000285106 J3QL48 77 aa7.92□□□□□ -1.14
CXXC1-201ENST00000285106 MUC17Q685J3 4493 aa7.9□□□□□ -1.14
CXXC1-201ENST00000285106 A0A0A0MQY5 61 aa7.89□□□□□ -1.15
CXXC1-201ENST00000285106 HERC2O95714 4834 aa7.87□□□□□ -1.15
CXXC1-201ENST00000285106 KRTAP4-1Q9BYQ7 146 aa7.85□□□□□ -1.15
CXXC1-201ENST00000285106 R4GN34 69 aa7.84□□□□□ -1.15
CXXC1-201ENST00000285106 LORP23490 312 aaPredicted RBP7.75□□□□□ -1.17
CXXC1-201ENST00000285106 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
CXXC1-201ENST00000285106 MUC2Q02817 5179 aa7.67□□□□□ -1.18
CXXC1-201ENST00000285106 KRTAP19-2Q3LHN2 52 aa7.66□□□□□ -1.18
CXXC1-201ENST00000285106 BIRC6Q9NR09 4857 aa7.56□□□□□ -1.2
CXXC1-201ENST00000285106 FLGP20930 4061 aaPredicted RBP7.54□□□□□ -1.2
CXXC1-201ENST00000285106 HERC1Q15751 4861 aa7.51□□□□□ -1.21
CXXC1-201ENST00000285106 PP632Q6XCG6 107 aa7.48□□□□□ -1.21
CXXC1-201ENST00000285106 CAMK2N1Q7Z7J9 78 aa7.48□□□□□ -1.21
CXXC1-201ENST00000285106 LUZP6Q538Z0 58 aa7.42□□□□□ -1.22
CXXC1-201ENST00000285106 HMCN2Q8NDA2 5059 aa7.4□□□□□ -1.23
CXXC1-201ENST00000285106 PCLOQ9Y6V0 5065 aa7.37□□□□□ -1.23
CXXC1-201ENST00000285106 FAT4Q6V0I7 4981 aa7.31□□□□□ -1.24
CXXC1-201ENST00000285106 LCE2CQ5TA81 110 aa7.24□□□□□ -1.25
CXXC1-201ENST00000285106 TNP1P09430 55 aa7.22□□□□□ -1.25
CXXC1-201ENST00000285106 M0R2T5 61 aa7.17□□□□□ -1.26
CXXC1-201ENST00000285106 SPRR5A0A1B0GTR4 108 aa7.15□□□□□ -1.27
CXXC1-201ENST00000285106 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
CXXC1-201ENST00000285106 RNF213Q63HN8 5207 aa7.12□□□□□ -1.27
CXXC1-201ENST00000285106 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.28
CXXC1-201ENST00000285106 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
CXXC1-201ENST00000285106 MT1HP80294 61 aa7.06□□□□□ -1.28
CXXC1-201ENST00000285106 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
CXXC1-201ENST00000285106 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
CXXC1-201ENST00000285106 MT1FP04733 61 aa6.95□□□□□ -1.3
CXXC1-201ENST00000285106 MT2AP02795 61 aa6.94□□□□□ -1.3
CXXC1-201ENST00000285106 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
CXXC1-201ENST00000285106 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
CXXC1-201ENST00000285106 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
CXXC1-201ENST00000285106 MT1BP07438 61 aa6.69□□□□□ -1.34
CXXC1-201ENST00000285106 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
CXXC1-201ENST00000285106 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
CXXC1-201ENST00000285106 MT1XP80297 61 aa6.63□□□□□ -1.35
CXXC1-201ENST00000285106 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
CXXC1-201ENST00000285106 PRO2289Q9P1D8 64 aa6.59□□□□□ -1.35
CXXC1-201ENST00000285106 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
CXXC1-201ENST00000285106 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
CXXC1-201ENST00000285106 INE1O15225 51 aa6.48□□□□□ -1.37
CXXC1-201ENST00000285106 KRTAP10-7P60409 375 aaPredicted RBP6.46□□□□□ -1.37
CXXC1-201ENST00000285106 LCE2BO14633 110 aa6.36□□□□□ -1.39
CXXC1-201ENST00000285106 USH2AO75445 5202 aa6.33□□□□□ -1.4
CXXC1-201ENST00000285106 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
CXXC1-201ENST00000285106 KMT2DO14686 5537 aa6.2□□□□□ -1.42
CXXC1-201ENST00000285106 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
CXXC1-201ENST00000285106 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
CXXC1-201ENST00000285106 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
CXXC1-201ENST00000285106 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
CXXC1-201ENST00000285106 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
CXXC1-201ENST00000285106 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
CXXC1-201ENST00000285106 SSPOA2VEC9 5147 aa5.85□□□□□ -1.47
CXXC1-201ENST00000285106 KRTAP2-3P0C7H8 128 aa5.83□□□□□ -1.48
CXXC1-201ENST00000285106 KRTAP2-4Q9BYR9 128 aa5.83□□□□□ -1.48
CXXC1-201ENST00000285106 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
CXXC1-201ENST00000285106 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
CXXC1-201ENST00000285106 FSIP2Q5CZC0 6907 aa5.8□□□□□ -1.48
CXXC1-201ENST00000285106 MT1EP04732 61 aa5.75□□□□□ -1.49
CXXC1-201ENST00000285106 MT1LQ93083 61 aa5.74□□□□□ -1.49
CXXC1-201ENST00000285106 KRTAP19-6Q3LI70 58 aa5.7□□□□□ -1.5
CXXC1-201ENST00000285106 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms