RNA–Protein interactions for RNA: ENST00000283629.7

UBP1-202, Transcript of upstream binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBP1, Length 4,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-202ENST00000283629 DNAH2Q9P225 4427 aa9.69□□□□□ -0.86
UBP1-202ENST00000283629 DNAH6Q9C0G6 4158 aa9.68□□□□□ -0.86
UBP1-202ENST00000283629 KRTAP12-2P59991 146 aa9.64□□□□□ -0.87
UBP1-202ENST00000283629 KRTAP13-4Q3LI77 160 aa9.59□□□□□ -0.87
UBP1-202ENST00000283629 HECTD4Q9Y4D8 3996 aa9.56□□□□□ -0.88
UBP1-202ENST00000283629 XP32Q5T750 250 aa9.55□□□□□ -0.88
UBP1-202ENST00000283629 DYNC2H1Q8NCM8 4307 aaKnown RBP9.52□□□□□ -0.89
UBP1-202ENST00000283629 HYDINQ4G0P3 5121 aa9.52□□□□□ -0.89
UBP1-202ENST00000283629 DYNC1H1Q14204 4646 aaKnown RBP9.47□□□□□ -0.89
UBP1-202ENST00000283629 VPS13BQ7Z7G8 4022 aa9.47□□□□□ -0.89
UBP1-202ENST00000283629 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
UBP1-202ENST00000283629 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
UBP1-202ENST00000283629 KRTAP12-1P59990 96 aa9.43□□□□□ -0.9
UBP1-202ENST00000283629 M0R2T5 61 aa9.42□□□□□ -0.9
UBP1-202ENST00000283629 KRTAP10-4P60372 401 aaPredicted RBP9.38□□□□□ -0.91
UBP1-202ENST00000283629 MYCBP2O75592 4640 aa9.35□□□□□ -0.91
UBP1-202ENST00000283629 KRTAP15-1Q3LI76 137 aa9.35□□□□□ -0.91
UBP1-202ENST00000283629 PKHD1P08F94 4074 aa9.34□□□□□ -0.91
UBP1-202ENST00000283629 TNP1P09430 55 aa9.31□□□□□ -0.92
UBP1-202ENST00000283629 ALMS1Q8TCU4 4167 aa9.28□□□□□ -0.92
UBP1-202ENST00000283629 PP632Q6XCG6 107 aa9.25□□□□□ -0.93
UBP1-202ENST00000283629 LRP1Q07954 4544 aaKnown RBP9.21□□□□□ -0.94
UBP1-202ENST00000283629 SACSQ9NZJ4 4579 aa9.18□□□□□ -0.94
UBP1-202ENST00000283629 KIAA1109Q2LD37 5005 aa9.17□□□□□ -0.94
UBP1-202ENST00000283629 KRTAP3-2Q9BYR7 98 aa9.15□□□□□ -0.94
UBP1-202ENST00000283629 APOBP04114 4563 aaKnown RBP9.14□□□□□ -0.95
UBP1-202ENST00000283629 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
UBP1-202ENST00000283629 FAT2Q9NYQ8 4349 aa9.1□□□□□ -0.95
UBP1-202ENST00000283629 MT1HL1P0DM35 61 aa9.09□□□□□ -0.95
UBP1-202ENST00000283629 FAT3Q8TDW7 4589 aa9.09□□□□□ -0.95
UBP1-202ENST00000283629 RYR1P21817 5038 aa9.09□□□□□ -0.95
UBP1-202ENST00000283629 KRTAP4-5Q9BYR2 181 aa9.07□□□□□ -0.96
UBP1-202ENST00000283629 KMT2CQ8NEZ4 4911 aaKnown RBP9.06□□□□□ -0.96
UBP1-202ENST00000283629 RYR3Q15413 4870 aa9□□□□□ -0.97
UBP1-202ENST00000283629 PKD1P98161 4303 aa8.99□□□□□ -0.97
UBP1-202ENST00000283629 RYR2Q92736 4967 aa8.91□□□□□ -0.98
UBP1-202ENST00000283629 KRTAP17-1Q9BYP8 105 aa8.88□□□□□ -0.99
UBP1-202ENST00000283629 LRP2P98164 4655 aa8.71□□□□□ -1.01
UBP1-202ENST00000283629 HSPG2P98160 4391 aa8.64□□□□□ -1.03
UBP1-202ENST00000283629 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.04
UBP1-202ENST00000283629 LPAP08519 4548 aa8.52□□□□□ -1.05
UBP1-202ENST00000283629 EPPK1P58107 5090 aaKnown RBP8.49□□□□□ -1.05
UBP1-202ENST00000283629 PKHD1L1Q86WI1 4243 aa8.49□□□□□ -1.05
UBP1-202ENST00000283629 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
UBP1-202ENST00000283629 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
UBP1-202ENST00000283629 HERC2O95714 4834 aa8.41□□□□□ -1.06
UBP1-202ENST00000283629 TNXBP22105 4242 aa8.35□□□□□ -1.07
UBP1-202ENST00000283629 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.08
UBP1-202ENST00000283629 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.09
UBP1-202ENST00000283629 INE1O15225 51 aa8.14□□□□□ -1.11
UBP1-202ENST00000283629 MUC2Q02817 5179 aa8.13□□□□□ -1.11
UBP1-202ENST00000283629 LCE3AQ5TA76 89 aa8.01□□□□□ -1.13
UBP1-202ENST00000283629 HERC1Q15751 4861 aa7.93□□□□□ -1.14
UBP1-202ENST00000283629 BIRC6Q9NR09 4857 aa7.86□□□□□ -1.15
UBP1-202ENST00000283629 RNF213Q63HN8 5207 aa7.84□□□□□ -1.15
UBP1-202ENST00000283629 KRTAP12-3P60328 96 aa7.83□□□□□ -1.16
UBP1-202ENST00000283629 FAT4Q6V0I7 4981 aa7.82□□□□□ -1.16
UBP1-202ENST00000283629 KRTAP23-1A1A580 65 aa7.8□□□□□ -1.16
UBP1-202ENST00000283629 KRTAP10-12P60413 245 aa7.79□□□□□ -1.16
UBP1-202ENST00000283629 PCLOQ9Y6V0 5065 aa7.71□□□□□ -1.18
UBP1-202ENST00000283629 MT1HP80294 61 aa7.7□□□□□ -1.18
UBP1-202ENST00000283629 UBR4Q5T4S7 5183 aa7.63□□□□□ -1.19
UBP1-202ENST00000283629 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
UBP1-202ENST00000283629 MT1FP04733 61 aa7.6□□□□□ -1.19
UBP1-202ENST00000283629 MT2AP02795 61 aa7.59□□□□□ -1.19
UBP1-202ENST00000283629 MUC17Q685J3 4493 aa7.58□□□□□ -1.2
UBP1-202ENST00000283629 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
UBP1-202ENST00000283629 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
UBP1-202ENST00000283629 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
UBP1-202ENST00000283629 SPRR2GQ9BYE4 73 aa7.49□□□□□ -1.21
UBP1-202ENST00000283629 CRCT1Q9UGL9 99 aa7.45□□□□□ -1.22
UBP1-202ENST00000283629 HMCN2Q8NDA2 5059 aa7.44□□□□□ -1.22
UBP1-202ENST00000283629 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
UBP1-202ENST00000283629 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.25
UBP1-202ENST00000283629 KRTAP8-1Q8IUC2 63 aa7.26□□□□□ -1.25
UBP1-202ENST00000283629 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
UBP1-202ENST00000283629 KRTAP10-5P60370 271 aa7.15□□□□□ -1.26
UBP1-202ENST00000283629 MT1BP07438 61 aa7.12□□□□□ -1.27
UBP1-202ENST00000283629 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
UBP1-202ENST00000283629 MT1XP80297 61 aa7.08□□□□□ -1.28
UBP1-202ENST00000283629 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
UBP1-202ENST00000283629 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
UBP1-202ENST00000283629 LCE3CQ5T5A8 94 aa7□□□□□ -1.29
UBP1-202ENST00000283629 USH2AO75445 5202 aa6.98□□□□□ -1.29
UBP1-202ENST00000283629 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
UBP1-202ENST00000283629 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
UBP1-202ENST00000283629 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
UBP1-202ENST00000283629 LCE2BO14633 110 aa6.84□□□□□ -1.31
UBP1-202ENST00000283629 SYNE1Q8NF91 8797 aaKnown RBP6.83□□□□□ -1.32
UBP1-202ENST00000283629 OBSCNQ5VST9 7968 aa6.79□□□□□ -1.32
UBP1-202ENST00000283629 KMT2DO14686 5537 aa6.77□□□□□ -1.33
UBP1-202ENST00000283629 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
UBP1-202ENST00000283629 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
UBP1-202ENST00000283629 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.38
UBP1-202ENST00000283629 DSTQ03001 7570 aaKnown RBP6.4□□□□□ -1.39
UBP1-202ENST00000283629 MT1GP13640 62 aa6.37□□□□□ -1.39
UBP1-202ENST00000283629 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
UBP1-202ENST00000283629 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
UBP1-202ENST00000283629 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
UBP1-202ENST00000283629 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms