RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 MYCBP2O75592 4640 aa3.67□□□□□ -1.82
SPOCK1-201ENST00000282223 LRP1BQ9NZR2 4599 aa3.66□□□□□ -1.82
SPOCK1-201ENST00000282223 DNAH1Q9P2D7 4330 aa3.65□□□□□ -1.83
SPOCK1-201ENST00000282223 DNAH2Q9P225 4427 aa3.63□□□□□ -1.83
SPOCK1-201ENST00000282223 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
SPOCK1-201ENST00000282223 DNAH7Q8WXX0 4024 aa3.61□□□□□ -1.83
SPOCK1-201ENST00000282223 CMYA5Q8N3K9 4069 aa3.6□□□□□ -1.83
SPOCK1-201ENST00000282223 KMT2AQ03164 3969 aa3.59□□□□□ -1.84
SPOCK1-201ENST00000282223 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
SPOCK1-201ENST00000282223 FAT1Q14517 4588 aa3.56□□□□□ -1.84
SPOCK1-201ENST00000282223 HECTD4Q9Y4D8 3996 aa3.55□□□□□ -1.84
SPOCK1-201ENST00000282223 DNAH6Q9C0G6 4158 aa3.54□□□□□ -1.84
SPOCK1-201ENST00000282223 APOBP04114 4563 aaKnown RBP3.53□□□□□ -1.84
SPOCK1-201ENST00000282223 STARD9Q9P2P6 4700 aa3.53□□□□□ -1.84
SPOCK1-201ENST00000282223 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
SPOCK1-201ENST00000282223 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
SPOCK1-201ENST00000282223 LRP1Q07954 4544 aaKnown RBP3.46□□□□□ -1.85
SPOCK1-201ENST00000282223 DNAH5Q8TE73 4624 aa3.45□□□□□ -1.86
SPOCK1-201ENST00000282223 FAT3Q8TDW7 4589 aa3.45□□□□□ -1.86
SPOCK1-201ENST00000282223 INE1O15225 51 aa3.44□□□□□ -1.86
SPOCK1-201ENST00000282223 VPS13DQ5THJ4 4388 aa3.43□□□□□ -1.86
SPOCK1-201ENST00000282223 DYNC1H1Q14204 4646 aaKnown RBP3.42□□□□□ -1.86
SPOCK1-201ENST00000282223 LCE2DQ5TA82 110 aaPredicted RBP3.4□□□□□ -1.87
SPOCK1-201ENST00000282223 DNAH3Q8TD57 4116 aa3.39□□□□□ -1.87
SPOCK1-201ENST00000282223 HSPG2P98160 4391 aa3.35□□□□□ -1.87
SPOCK1-201ENST00000282223 PRKDCP78527 4128 aaKnown RBP3.34□□□□□ -1.87
SPOCK1-201ENST00000282223 KRTAP10-4P60372 401 aaPredicted RBP3.34□□□□□ -1.87
SPOCK1-201ENST00000282223 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
SPOCK1-201ENST00000282223 LRP2P98164 4655 aa3.34□□□□□ -1.88
SPOCK1-201ENST00000282223 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.88
SPOCK1-201ENST00000282223 DNHD1Q96M86 4753 aa3.3□□□□□ -1.88
SPOCK1-201ENST00000282223 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
SPOCK1-201ENST00000282223 FAT2Q9NYQ8 4349 aa3.27□□□□□ -1.89
SPOCK1-201ENST00000282223 PKHD1P08F94 4074 aa3.27□□□□□ -1.89
SPOCK1-201ENST00000282223 SACSQ9NZJ4 4579 aa3.26□□□□□ -1.89
SPOCK1-201ENST00000282223 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
SPOCK1-201ENST00000282223 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
SPOCK1-201ENST00000282223 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
SPOCK1-201ENST00000282223 HYDINQ4G0P3 5121 aa3.21□□□□□ -1.9
SPOCK1-201ENST00000282223 LPAP08519 4548 aa3.18□□□□□ -1.9
SPOCK1-201ENST00000282223 RYR1P21817 5038 aa3.16□□□□□ -1.9
SPOCK1-201ENST00000282223 KMT2CQ8NEZ4 4911 aaKnown RBP3.16□□□□□ -1.9
SPOCK1-201ENST00000282223 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
SPOCK1-201ENST00000282223 KRTAP4-1Q9BYQ7 146 aa3.14□□□□□ -1.91
SPOCK1-201ENST00000282223 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
SPOCK1-201ENST00000282223 KIAA1109Q2LD37 5005 aa3.12□□□□□ -1.91
SPOCK1-201ENST00000282223 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
SPOCK1-201ENST00000282223 PKD1P98161 4303 aa3.05□□□□□ -1.92
SPOCK1-201ENST00000282223 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
SPOCK1-201ENST00000282223 MUC2Q02817 5179 aa3.01□□□□□ -1.93
SPOCK1-201ENST00000282223 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
SPOCK1-201ENST00000282223 KRTAP17-1Q9BYP8 105 aa3□□□□□ -1.93
SPOCK1-201ENST00000282223 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
SPOCK1-201ENST00000282223 PKHD1L1Q86WI1 4243 aa2.97□□□□□ -1.93
SPOCK1-201ENST00000282223 EPPK1P58107 5090 aaKnown RBP2.94□□□□□ -1.94
SPOCK1-201ENST00000282223 RYR3Q15413 4870 aa2.94□□□□□ -1.94
SPOCK1-201ENST00000282223 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
SPOCK1-201ENST00000282223 CRCT1Q9UGL9 99 aa2.91□□□□□ -1.94
SPOCK1-201ENST00000282223 KRTAP19-1Q8IUB9 90 aa2.9□□□□□ -1.95
SPOCK1-201ENST00000282223 TNXBP22105 4242 aa2.89□□□□□ -1.95
SPOCK1-201ENST00000282223 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
SPOCK1-201ENST00000282223 FAT4Q6V0I7 4981 aa2.87□□□□□ -1.95
SPOCK1-201ENST00000282223 ABCA13Q86UQ4 5058 aa2.86□□□□□ -1.95
SPOCK1-201ENST00000282223 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
SPOCK1-201ENST00000282223 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
SPOCK1-201ENST00000282223 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.96
SPOCK1-201ENST00000282223 HMCN2Q8NDA2 5059 aa2.81□□□□□ -1.96
SPOCK1-201ENST00000282223 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
SPOCK1-201ENST00000282223 RYR2Q92736 4967 aa2.8□□□□□ -1.96
SPOCK1-201ENST00000282223 MT2AP02795 61 aa2.8□□□□□ -1.96
SPOCK1-201ENST00000282223 MT1FP04733 61 aa2.79□□□□□ -1.96
SPOCK1-201ENST00000282223 UBR4Q5T4S7 5183 aa2.79□□□□□ -1.96
SPOCK1-201ENST00000282223 KRTAP4-7Q9BYR0 210 aa2.79□□□□□ -1.96
SPOCK1-201ENST00000282223 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
SPOCK1-201ENST00000282223 KRTAP19-2Q3LHN2 52 aa2.79□□□□□ -1.96
SPOCK1-201ENST00000282223 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
SPOCK1-201ENST00000282223 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
SPOCK1-201ENST00000282223 MT1HP80294 61 aa2.76□□□□□ -1.97
SPOCK1-201ENST00000282223 MT1XP80297 61 aa2.76□□□□□ -1.97
SPOCK1-201ENST00000282223 KRTAP19-4Q3LI73 84 aa2.74□□□□□ -1.97
SPOCK1-201ENST00000282223 FLGP20930 4061 aaPredicted RBP2.73□□□□□ -1.97
SPOCK1-201ENST00000282223 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
SPOCK1-201ENST00000282223 KRTAP19-8Q3LI54 63 aa2.72□□□□□ -1.97
SPOCK1-201ENST00000282223 KMT2DO14686 5537 aa2.72□□□□□ -1.97
SPOCK1-201ENST00000282223 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
SPOCK1-201ENST00000282223 KRTAP4-8Q9BYQ9 185 aa2.72□□□□□ -1.97
SPOCK1-201ENST00000282223 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
SPOCK1-201ENST00000282223 FCGBPQ9Y6R7 5405 aaPredicted RBP2.7□□□□□ -1.98
SPOCK1-201ENST00000282223 HERC2O95714 4834 aa2.7□□□□□ -1.98
SPOCK1-201ENST00000282223 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
SPOCK1-201ENST00000282223 MT1BP07438 61 aa2.68□□□□□ -1.98
SPOCK1-201ENST00000282223 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
SPOCK1-201ENST00000282223 BIRC6Q9NR09 4857 aa2.66□□□□□ -1.98
SPOCK1-201ENST00000282223 LCE2AQ5TA79 106 aaPredicted RBP2.64□□□□□ -1.99
SPOCK1-201ENST00000282223 HERC1Q15751 4861 aa2.64□□□□□ -1.99
SPOCK1-201ENST00000282223 LCE2BO14633 110 aa2.62□□□□□ -1.99
SPOCK1-201ENST00000282223 LCE2CQ5TA81 110 aa2.61□□□□□ -1.99
SPOCK1-201ENST00000282223 USH2AO75445 5202 aa2.6□□□□□ -1.99
SPOCK1-201ENST00000282223 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
SPOCK1-201ENST00000282223 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms