RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 VPS13BQ7Z7G8 4022 aa7.14□□□□□ -1.27
VPS26B-201ENST00000281187 KRTAP3-3Q9BYR6 98 aa7.13□□□□□ -1.27
VPS26B-201ENST00000281187 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
VPS26B-201ENST00000281187 FAT1Q14517 4588 aa7.11□□□□□ -1.27
VPS26B-201ENST00000281187 KRTAP12-1P59990 96 aa7.1□□□□□ -1.27
VPS26B-201ENST00000281187 DNAH5Q8TE73 4624 aa7.09□□□□□ -1.27
VPS26B-201ENST00000281187 KRTAP15-1Q3LI76 137 aa7.04□□□□□ -1.28
VPS26B-201ENST00000281187 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
VPS26B-201ENST00000281187 PLAC4Q8WY50 150 aa7□□□□□ -1.29
VPS26B-201ENST00000281187 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
VPS26B-201ENST00000281187 DNHD1Q96M86 4753 aa6.95□□□□□ -1.3
VPS26B-201ENST00000281187 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
VPS26B-201ENST00000281187 KRTAP10-4P60372 401 aaPredicted RBP6.89□□□□□ -1.31
VPS26B-201ENST00000281187 A0A1B0GVY2 172 aa6.89□□□□□ -1.31
VPS26B-201ENST00000281187 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
VPS26B-201ENST00000281187 DYNC1H1Q14204 4646 aaKnown RBP6.88□□□□□ -1.31
VPS26B-201ENST00000281187 PKHD1P08F94 4074 aa6.86□□□□□ -1.31
VPS26B-201ENST00000281187 J3QL48 77 aa6.82□□□□□ -1.32
VPS26B-201ENST00000281187 FAT2Q9NYQ8 4349 aa6.81□□□□□ -1.32
VPS26B-201ENST00000281187 LRP1Q07954 4544 aaKnown RBP6.79□□□□□ -1.32
VPS26B-201ENST00000281187 SACSQ9NZJ4 4579 aa6.78□□□□□ -1.32
VPS26B-201ENST00000281187 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
VPS26B-201ENST00000281187 APOBP04114 4563 aaKnown RBP6.74□□□□□ -1.33
VPS26B-201ENST00000281187 FAT3Q8TDW7 4589 aa6.7□□□□□ -1.34
VPS26B-201ENST00000281187 PKD1P98161 4303 aa6.67□□□□□ -1.34
VPS26B-201ENST00000281187 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
VPS26B-201ENST00000281187 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
VPS26B-201ENST00000281187 TNP1P09430 55 aa6.61□□□□□ -1.35
VPS26B-201ENST00000281187 HSPG2P98160 4391 aa6.57□□□□□ -1.36
VPS26B-201ENST00000281187 MT1HL1P0DM35 61 aa6.57□□□□□ -1.36
VPS26B-201ENST00000281187 LRP2P98164 4655 aa6.52□□□□□ -1.37
VPS26B-201ENST00000281187 M0R2T5 61 aa6.52□□□□□ -1.37
VPS26B-201ENST00000281187 KIAA1109Q2LD37 5005 aa6.44□□□□□ -1.38
VPS26B-201ENST00000281187 RYR1P21817 5038 aa6.43□□□□□ -1.38
VPS26B-201ENST00000281187 KMT2CQ8NEZ4 4911 aaKnown RBP6.42□□□□□ -1.38
VPS26B-201ENST00000281187 LPAP08519 4548 aa6.35□□□□□ -1.39
VPS26B-201ENST00000281187 PKHD1L1Q86WI1 4243 aa6.34□□□□□ -1.39
VPS26B-201ENST00000281187 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
VPS26B-201ENST00000281187 KRTAP21-3Q3LHN1 58 aa6.3□□□□□ -1.4
VPS26B-201ENST00000281187 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
VPS26B-201ENST00000281187 RYR3Q15413 4870 aa6.27□□□□□ -1.41
VPS26B-201ENST00000281187 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
VPS26B-201ENST00000281187 TNXBP22105 4242 aa6.2□□□□□ -1.42
VPS26B-201ENST00000281187 RYR2Q92736 4967 aa6.18□□□□□ -1.42
VPS26B-201ENST00000281187 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
VPS26B-201ENST00000281187 ABCA13Q86UQ4 5058 aa6□□□□□ -1.45
VPS26B-201ENST00000281187 LCE3AQ5TA76 89 aa6□□□□□ -1.45
VPS26B-201ENST00000281187 MUC2Q02817 5179 aa5.98□□□□□ -1.45
VPS26B-201ENST00000281187 EPPK1P58107 5090 aaKnown RBP5.96□□□□□ -1.45
VPS26B-201ENST00000281187 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
VPS26B-201ENST00000281187 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
VPS26B-201ENST00000281187 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
VPS26B-201ENST00000281187 HERC2O95714 4834 aa5.76□□□□□ -1.49
VPS26B-201ENST00000281187 INE1O15225 51 aa5.76□□□□□ -1.49
VPS26B-201ENST00000281187 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
VPS26B-201ENST00000281187 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
VPS26B-201ENST00000281187 KRTAP19-2Q3LHN2 52 aa5.72□□□□□ -1.49
VPS26B-201ENST00000281187 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
VPS26B-201ENST00000281187 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
VPS26B-201ENST00000281187 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
VPS26B-201ENST00000281187 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
VPS26B-201ENST00000281187 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
VPS26B-201ENST00000281187 MT1FP04733 61 aa5.58□□□□□ -1.52
VPS26B-201ENST00000281187 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
VPS26B-201ENST00000281187 MT2AP02795 61 aa5.55□□□□□ -1.52
VPS26B-201ENST00000281187 RNF213Q63HN8 5207 aa5.53□□□□□ -1.52
VPS26B-201ENST00000281187 MT1HP80294 61 aa5.52□□□□□ -1.53
VPS26B-201ENST00000281187 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
VPS26B-201ENST00000281187 HERC1Q15751 4861 aa5.46□□□□□ -1.54
VPS26B-201ENST00000281187 LCE2CQ5TA81 110 aa5.45□□□□□ -1.54
VPS26B-201ENST00000281187 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
VPS26B-201ENST00000281187 HMCN2Q8NDA2 5059 aa5.41□□□□□ -1.54
VPS26B-201ENST00000281187 MT1XP80297 61 aa5.38□□□□□ -1.55
VPS26B-201ENST00000281187 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
VPS26B-201ENST00000281187 UBR4Q5T4S7 5183 aa5.33□□□□□ -1.56
VPS26B-201ENST00000281187 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
VPS26B-201ENST00000281187 MT1BP07438 61 aa5.33□□□□□ -1.56
VPS26B-201ENST00000281187 BIRC6Q9NR09 4857 aa5.31□□□□□ -1.56
VPS26B-201ENST00000281187 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
VPS26B-201ENST00000281187 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
VPS26B-201ENST00000281187 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
VPS26B-201ENST00000281187 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
VPS26B-201ENST00000281187 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
VPS26B-201ENST00000281187 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
VPS26B-201ENST00000281187 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
VPS26B-201ENST00000281187 KMT2DO14686 5537 aa5.13□□□□□ -1.59
VPS26B-201ENST00000281187 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
VPS26B-201ENST00000281187 USH2AO75445 5202 aa5.09□□□□□ -1.6
VPS26B-201ENST00000281187 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
VPS26B-201ENST00000281187 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
VPS26B-201ENST00000281187 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
VPS26B-201ENST00000281187 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
VPS26B-201ENST00000281187 LCE2BO14633 110 aa4.9□□□□□ -1.62
VPS26B-201ENST00000281187 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
VPS26B-201ENST00000281187 LCE2AQ5TA79 106 aaPredicted RBP4.82□□□□□ -1.64
VPS26B-201ENST00000281187 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
VPS26B-201ENST00000281187 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
VPS26B-201ENST00000281187 MT1GP13640 62 aa4.75□□□□□ -1.65
VPS26B-201ENST00000281187 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
VPS26B-201ENST00000281187 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms