RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 DYNC1H1Q14204 4646 aaKnown RBP2.11□□□□□ -2.07
HMCN1-201ENST00000271588 DNAH5Q8TE73 4624 aa2.11□□□□□ -2.07
HMCN1-201ENST00000271588 ZFHX3Q15911 3703 aa2.09□□□□□ -2.08
HMCN1-201ENST00000271588 MYCBP2O75592 4640 aa2.08□□□□□ -2.08
HMCN1-201ENST00000271588 TRRAPQ9Y4A5 3859 aa2.08□□□□□ -2.08
HMCN1-201ENST00000271588 DNAH8Q96JB1 4490 aa2.06□□□□□ -2.08
HMCN1-201ENST00000271588 ZNF469Q96JG9 3925 aaPredicted RBP2.06□□□□□ -2.08
HMCN1-201ENST00000271588 LRP2P98164 4655 aa2.05□□□□□ -2.08
HMCN1-201ENST00000271588 LOC400499M0QZD8 3231 aa2.04□□□□□ -2.08
HMCN1-201ENST00000271588 ANK2Q01484 3957 aa2.04□□□□□ -2.08
HMCN1-201ENST00000271588 KRTAP8-1Q8IUC2 63 aa2.04□□□□□ -2.08
HMCN1-201ENST00000271588 SPTBN5Q9NRC6 3674 aaKnown RBP2.03□□□□□ -2.08
HMCN1-201ENST00000271588 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.08
HMCN1-201ENST00000271588 DYNC2H1Q8NCM8 4307 aaKnown RBP2.03□□□□□ -2.08
HMCN1-201ENST00000271588 PKD1P98161 4303 aa2.02□□□□□ -2.09
HMCN1-201ENST00000271588 WDFY3Q8IZQ1 3526 aa2.02□□□□□ -2.09
HMCN1-201ENST00000271588 LRP1Q07954 4544 aaKnown RBP2.02□□□□□ -2.09
HMCN1-201ENST00000271588 DNHD1Q96M86 4753 aa2.01□□□□□ -2.09
HMCN1-201ENST00000271588 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
HMCN1-201ENST00000271588 FAT1Q14517 4588 aa2□□□□□ -2.09
HMCN1-201ENST00000271588 HECTD4Q9Y4D8 3996 aa1.99□□□□□ -2.09
HMCN1-201ENST00000271588 KMT2AQ03164 3969 aa1.99□□□□□ -2.09
HMCN1-201ENST00000271588 RELNP78509 3460 aa1.98□□□□□ -2.09
HMCN1-201ENST00000271588 ZFHX4Q86UP3 3567 aa1.97□□□□□ -2.09
HMCN1-201ENST00000271588 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
HMCN1-201ENST00000271588 FLGP20930 4061 aaPredicted RBP1.96□□□□□ -2.1
HMCN1-201ENST00000271588 BIRC6Q9NR09 4857 aa1.96□□□□□ -2.1
HMCN1-201ENST00000271588 CSMD1Q96PZ7 3565 aa1.96□□□□□ -2.1
HMCN1-201ENST00000271588 CUBNO60494 3623 aa1.95□□□□□ -2.1
HMCN1-201ENST00000271588 PKHD1L1Q86WI1 4243 aa1.94□□□□□ -2.1
HMCN1-201ENST00000271588 LRP1BQ9NZR2 4599 aa1.94□□□□□ -2.1
HMCN1-201ENST00000271588 LORP23490 312 aaPredicted RBP1.93□□□□□ -2.1
HMCN1-201ENST00000271588 LCE3CQ5T5A8 94 aa1.91□□□□□ -2.1
HMCN1-201ENST00000271588 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
HMCN1-201ENST00000271588 HSPG2P98160 4391 aa1.9□□□□□ -2.1
HMCN1-201ENST00000271588 FAT2Q9NYQ8 4349 aa1.9□□□□□ -2.1
HMCN1-201ENST00000271588 TNXBP22105 4242 aa1.9□□□□□ -2.11
HMCN1-201ENST00000271588 KRTAP19-8Q3LI54 63 aa1.89□□□□□ -2.11
HMCN1-201ENST00000271588 KRTAP10-5P60370 271 aa1.88□□□□□ -2.11
HMCN1-201ENST00000271588 HYDINQ4G0P3 5121 aa1.86□□□□□ -2.11
HMCN1-201ENST00000271588 LAMA5O15230 3695 aa1.86□□□□□ -2.11
HMCN1-201ENST00000271588 MT3P25713 68 aa1.86□□□□□ -2.11
HMCN1-201ENST00000271588 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
HMCN1-201ENST00000271588 SVEP1Q4LDE5 3571 aa1.85□□□□□ -2.11
HMCN1-201ENST00000271588 KRTAP10-7P60409 375 aaPredicted RBP1.84□□□□□ -2.11
HMCN1-201ENST00000271588 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.11
HMCN1-201ENST00000271588 SPENQ96T58 3664 aaKnown RBP1.84□□□□□ -2.12
HMCN1-201ENST00000271588 MT2AP02795 61 aa1.84□□□□□ -2.12
HMCN1-201ENST00000271588 STARD9Q9P2P6 4700 aa1.83□□□□□ -2.12
HMCN1-201ENST00000271588 MT1HP80294 61 aa1.83□□□□□ -2.12
HMCN1-201ENST00000271588 PCLOQ9Y6V0 5065 aa1.82□□□□□ -2.12
HMCN1-201ENST00000271588 SMG1Q96Q15 3661 aaKnown RBP1.81□□□□□ -2.12
HMCN1-201ENST00000271588 CRCT1Q9UGL9 99 aa1.8□□□□□ -2.12
HMCN1-201ENST00000271588 CSMD2Q7Z408 3487 aa1.8□□□□□ -2.12
HMCN1-201ENST00000271588 RYR1P21817 5038 aa1.8□□□□□ -2.12
HMCN1-201ENST00000271588 HMCN2Q8NDA2 5059 aa1.79□□□□□ -2.12
HMCN1-201ENST00000271588 HERC1Q15751 4861 aa1.79□□□□□ -2.12
HMCN1-201ENST00000271588 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
HMCN1-201ENST00000271588 LYSTQ99698 3801 aa1.78□□□□□ -2.13
HMCN1-201ENST00000271588 VPS13CQ709C8 3753 aa1.77□□□□□ -2.13
HMCN1-201ENST00000271588 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
HMCN1-201ENST00000271588 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
HMCN1-201ENST00000271588 KRTAP4-5Q9BYR2 181 aa1.76□□□□□ -2.13
HMCN1-201ENST00000271588 RYR2Q92736 4967 aa1.76□□□□□ -2.13
HMCN1-201ENST00000271588 MT1GP13640 62 aa1.75□□□□□ -2.13
HMCN1-201ENST00000271588 MT1FP04733 61 aa1.75□□□□□ -2.13
HMCN1-201ENST00000271588 KMT2DO14686 5537 aa1.75□□□□□ -2.13
HMCN1-201ENST00000271588 KRTAP4-1Q9BYQ7 146 aa1.75□□□□□ -2.13
HMCN1-201ENST00000271588 RYR3Q15413 4870 aa1.73□□□□□ -2.13
HMCN1-201ENST00000271588 HERC2O95714 4834 aa1.73□□□□□ -2.13
HMCN1-201ENST00000271588 KRTAP19-1Q8IUB9 90 aa1.73□□□□□ -2.13
HMCN1-201ENST00000271588 LPAP08519 4548 aa1.73□□□□□ -2.13
HMCN1-201ENST00000271588 MDN1Q9NU22 5596 aa1.72□□□□□ -2.13
HMCN1-201ENST00000271588 DMDP11532 3685 aa1.72□□□□□ -2.13
HMCN1-201ENST00000271588 EPPK1P58107 5090 aaKnown RBP1.72□□□□□ -2.13
HMCN1-201ENST00000271588 MUC3AQ02505 3323 aa1.72□□□□□ -2.13
HMCN1-201ENST00000271588 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
HMCN1-201ENST00000271588 MT1LQ93083 61 aa1.71□□□□□ -2.13
HMCN1-201ENST00000271588 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
HMCN1-201ENST00000271588 UBR4Q5T4S7 5183 aa1.71□□□□□ -2.14
HMCN1-201ENST00000271588 MT1XP80297 61 aa1.69□□□□□ -2.14
HMCN1-201ENST00000271588 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
HMCN1-201ENST00000271588 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
HMCN1-201ENST00000271588 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
HMCN1-201ENST00000271588 MT1EP04732 61 aa1.66□□□□□ -2.14
HMCN1-201ENST00000271588 MT1BP07438 61 aa1.64□□□□□ -2.15
HMCN1-201ENST00000271588 KMT2CQ8NEZ4 4911 aaKnown RBP1.62□□□□□ -2.15
HMCN1-201ENST00000271588 SPRR2AP35326 72 aa1.61□□□□□ -2.15
HMCN1-201ENST00000271588 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
HMCN1-201ENST00000271588 KRTAP9-8Q9BYQ0 159 aa1.61□□□□□ -2.15
HMCN1-201ENST00000271588 LCE2BO14633 110 aa1.6□□□□□ -2.15
HMCN1-201ENST00000271588 KRTAP9-3Q9BYQ3 159 aa1.59□□□□□ -2.15
HMCN1-201ENST00000271588 SPRR2BP35325 72 aa1.59□□□□□ -2.16
HMCN1-201ENST00000271588 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
HMCN1-201ENST00000271588 SPRR2EP22531 72 aa1.57□□□□□ -2.16
HMCN1-201ENST00000271588 KRTAP2-3P0C7H8 128 aa1.57□□□□□ -2.16
HMCN1-201ENST00000271588 KRTAP2-4Q9BYR9 128 aa1.57□□□□□ -2.16
HMCN1-201ENST00000271588 KRTAP2-1Q9BYU5 128 aa1.57□□□□□ -2.16
HMCN1-201ENST00000271588 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
HMCN1-201ENST00000271588 MT1AP04731 61 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms