RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 KRTAP10-4P60372 401 aaPredicted RBP5.37□□□□□ -1.55
PRDM16-201ENST00000270722 CSMD2Q7Z408 3487 aa5.35□□□□□ -1.55
PRDM16-201ENST00000270722 TRRAPQ9Y4A5 3859 aa5.34□□□□□ -1.56
PRDM16-201ENST00000270722 KRTAP4-5Q9BYR2 181 aa5.28□□□□□ -1.56
PRDM16-201ENST00000270722 VPS13CQ709C8 3753 aa5.28□□□□□ -1.56
PRDM16-201ENST00000270722 DNAH3Q8TD57 4116 aa5.27□□□□□ -1.57
PRDM16-201ENST00000270722 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
PRDM16-201ENST00000270722 CSMD3Q7Z407 3707 aa5.2□□□□□ -1.58
PRDM16-201ENST00000270722 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
PRDM16-201ENST00000270722 BSNQ9UPA5 3926 aa5.15□□□□□ -1.59
PRDM16-201ENST00000270722 MT1HP80294 61 aa5.08□□□□□ -1.6
PRDM16-201ENST00000270722 HUWE1Q7Z6Z7 4374 aaKnown RBP5.02□□□□□ -1.61
PRDM16-201ENST00000270722 MT2AP02795 61 aa5.01□□□□□ -1.61
PRDM16-201ENST00000270722 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
PRDM16-201ENST00000270722 KRTAP12-4P60329 112 aa5□□□□□ -1.61
PRDM16-201ENST00000270722 DNAH1Q9P2D7 4330 aa5□□□□□ -1.61
PRDM16-201ENST00000270722 ANK3Q12955 4377 aaKnown RBP4.97□□□□□ -1.61
PRDM16-201ENST00000270722 DNAH7Q8WXX0 4024 aa4.93□□□□□ -1.62
PRDM16-201ENST00000270722 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
PRDM16-201ENST00000270722 SPRR2EP22531 72 aa4.91□□□□□ -1.62
PRDM16-201ENST00000270722 SPRR2BP35325 72 aa4.91□□□□□ -1.62
PRDM16-201ENST00000270722 SPRR2AP35326 72 aa4.91□□□□□ -1.62
PRDM16-201ENST00000270722 DNAH6Q9C0G6 4158 aa4.9□□□□□ -1.63
PRDM16-201ENST00000270722 ZNF469Q96JG9 3925 aaPredicted RBP4.9□□□□□ -1.63
PRDM16-201ENST00000270722 LYSTQ99698 3801 aa4.86□□□□□ -1.63
PRDM16-201ENST00000270722 LCE2BO14633 110 aa4.83□□□□□ -1.64
PRDM16-201ENST00000270722 SPRR2DP22532 72 aa4.82□□□□□ -1.64
PRDM16-201ENST00000270722 HECTD4Q9Y4D8 3996 aa4.81□□□□□ -1.64
PRDM16-201ENST00000270722 MT1FP04733 61 aa4.8□□□□□ -1.64
PRDM16-201ENST00000270722 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
PRDM16-201ENST00000270722 KMT2AQ03164 3969 aa4.75□□□□□ -1.65
PRDM16-201ENST00000270722 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
PRDM16-201ENST00000270722 FLGP20930 4061 aaPredicted RBP4.71□□□□□ -1.65
PRDM16-201ENST00000270722 ANK2Q01484 3957 aa4.7□□□□□ -1.66
PRDM16-201ENST00000270722 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
PRDM16-201ENST00000270722 MT1GP13640 62 aa4.69□□□□□ -1.66
PRDM16-201ENST00000270722 DNAH2Q9P225 4427 aa4.68□□□□□ -1.66
PRDM16-201ENST00000270722 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
PRDM16-201ENST00000270722 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
PRDM16-201ENST00000270722 LRP1Q07954 4544 aaKnown RBP4.57□□□□□ -1.68
PRDM16-201ENST00000270722 LCE2CQ5TA81 110 aa4.55□□□□□ -1.68
PRDM16-201ENST00000270722 DNAH11Q96DT5 4516 aa4.53□□□□□ -1.68
PRDM16-201ENST00000270722 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
PRDM16-201ENST00000270722 FRAS1Q86XX4 4008 aa4.51□□□□□ -1.69
PRDM16-201ENST00000270722 DNAH10Q8IVF4 4471 aa4.51□□□□□ -1.69
PRDM16-201ENST00000270722 DNAH9Q9NYC9 4486 aa4.47□□□□□ -1.69
PRDM16-201ENST00000270722 VPS13BQ7Z7G8 4022 aa4.46□□□□□ -1.7
PRDM16-201ENST00000270722 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
PRDM16-201ENST00000270722 DNAH5Q8TE73 4624 aa4.45□□□□□ -1.7
PRDM16-201ENST00000270722 LCE2DQ5TA82 110 aaPredicted RBP4.44□□□□□ -1.7
PRDM16-201ENST00000270722 PLECQ15149 4684 aaKnown RBP4.44□□□□□ -1.7
PRDM16-201ENST00000270722 DNAH17Q9UFH2 4485 aa4.43□□□□□ -1.7
PRDM16-201ENST00000270722 MT1XP80297 61 aa4.42□□□□□ -1.7
PRDM16-201ENST00000270722 VPS13DQ5THJ4 4388 aa4.4□□□□□ -1.7
PRDM16-201ENST00000270722 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
PRDM16-201ENST00000270722 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
PRDM16-201ENST00000270722 FAT1Q14517 4588 aa4.36□□□□□ -1.71
PRDM16-201ENST00000270722 MT1LQ93083 61 aa4.36□□□□□ -1.71
PRDM16-201ENST00000270722 DYNC2H1Q8NCM8 4307 aaKnown RBP4.32□□□□□ -1.72
PRDM16-201ENST00000270722 FAT2Q9NYQ8 4349 aa4.31□□□□□ -1.72
PRDM16-201ENST00000270722 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
PRDM16-201ENST00000270722 PRM1P04553 51 aa4.3□□□□□ -1.72
PRDM16-201ENST00000270722 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
PRDM16-201ENST00000270722 MT1BP07438 61 aa4.27□□□□□ -1.73
PRDM16-201ENST00000270722 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
PRDM16-201ENST00000270722 STARD9Q9P2P6 4700 aa4.23□□□□□ -1.73
PRDM16-201ENST00000270722 DYNC1H1Q14204 4646 aaKnown RBP4.21□□□□□ -1.73
PRDM16-201ENST00000270722 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
PRDM16-201ENST00000270722 SACSQ9NZJ4 4579 aa4.12□□□□□ -1.75
PRDM16-201ENST00000270722 MT4P47944 62 aa4.11□□□□□ -1.75
PRDM16-201ENST00000270722 MT1EP04732 61 aa4.1□□□□□ -1.75
PRDM16-201ENST00000270722 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
PRDM16-201ENST00000270722 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
PRDM16-201ENST00000270722 PKHD1P08F94 4074 aa4.09□□□□□ -1.75
PRDM16-201ENST00000270722 LRP1BQ9NZR2 4599 aa4.08□□□□□ -1.76
PRDM16-201ENST00000270722 PKD1P98161 4303 aa4.08□□□□□ -1.76
PRDM16-201ENST00000270722 RYR1P21817 5038 aa4.08□□□□□ -1.76
PRDM16-201ENST00000270722 APOBP04114 4563 aaKnown RBP4.06□□□□□ -1.76
PRDM16-201ENST00000270722 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
PRDM16-201ENST00000270722 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
PRDM16-201ENST00000270722 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
PRDM16-201ENST00000270722 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
PRDM16-201ENST00000270722 MT1MQ8N339 61 aa4.03□□□□□ -1.76
PRDM16-201ENST00000270722 KRTAP9-2Q9BYQ4 174 aa4.01□□□□□ -1.77
PRDM16-201ENST00000270722 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
PRDM16-201ENST00000270722 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
PRDM16-201ENST00000270722 DNHD1Q96M86 4753 aa3.94□□□□□ -1.78
PRDM16-201ENST00000270722 HSPG2P98160 4391 aa3.94□□□□□ -1.78
PRDM16-201ENST00000270722 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
PRDM16-201ENST00000270722 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
PRDM16-201ENST00000270722 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
PRDM16-201ENST00000270722 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
PRDM16-201ENST00000270722 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
PRDM16-201ENST00000270722 RYR3Q15413 4870 aa3.87□□□□□ -1.79
PRDM16-201ENST00000270722 MT1AP04731 61 aa3.87□□□□□ -1.79
PRDM16-201ENST00000270722 RYR2Q92736 4967 aa3.84□□□□□ -1.8
PRDM16-201ENST00000270722 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
PRDM16-201ENST00000270722 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
PRDM16-201ENST00000270722 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
PRDM16-201ENST00000270722 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms