RNA–Protein interactions for RNA: ENST00000269844.4

PRDM15-201, Transcript of PR/SET domain 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM15, Length 4,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-201ENST00000269844 CMYA5Q8N3K9 4069 aa6.26□□□□□ -1.41
PRDM15-201ENST00000269844 STARD9Q9P2P6 4700 aa6.26□□□□□ -1.41
PRDM15-201ENST00000269844 ALMS1Q8TCU4 4167 aa6.23□□□□□ -1.41
PRDM15-201ENST00000269844 DNAH10Q8IVF4 4471 aa6.23□□□□□ -1.41
PRDM15-201ENST00000269844 DNAH1Q9P2D7 4330 aa6.2□□□□□ -1.42
PRDM15-201ENST00000269844 DNAH3Q8TD57 4116 aa6.19□□□□□ -1.42
PRDM15-201ENST00000269844 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
PRDM15-201ENST00000269844 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
PRDM15-201ENST00000269844 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
PRDM15-201ENST00000269844 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
PRDM15-201ENST00000269844 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
PRDM15-201ENST00000269844 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
PRDM15-201ENST00000269844 VPS13DQ5THJ4 4388 aa6.15□□□□□ -1.43
PRDM15-201ENST00000269844 DNAH11Q96DT5 4516 aa6.1□□□□□ -1.43
PRDM15-201ENST00000269844 KMT2AQ03164 3969 aa6.09□□□□□ -1.43
PRDM15-201ENST00000269844 LYSTQ99698 3801 aa6.08□□□□□ -1.44
PRDM15-201ENST00000269844 DNAH5Q8TE73 4624 aa6.07□□□□□ -1.44
PRDM15-201ENST00000269844 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
PRDM15-201ENST00000269844 DNAH17Q9UFH2 4485 aa5.99□□□□□ -1.45
PRDM15-201ENST00000269844 KRTAP4-5Q9BYR2 181 aa5.97□□□□□ -1.45
PRDM15-201ENST00000269844 DNAH7Q8WXX0 4024 aa5.96□□□□□ -1.46
PRDM15-201ENST00000269844 DYNC2H1Q8NCM8 4307 aaKnown RBP5.94□□□□□ -1.46
PRDM15-201ENST00000269844 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
PRDM15-201ENST00000269844 LRP1BQ9NZR2 4599 aa5.93□□□□□ -1.46
PRDM15-201ENST00000269844 DNAH2Q9P225 4427 aa5.93□□□□□ -1.46
PRDM15-201ENST00000269844 FAT1Q14517 4588 aa5.93□□□□□ -1.46
PRDM15-201ENST00000269844 HYDINQ4G0P3 5121 aa5.83□□□□□ -1.48
PRDM15-201ENST00000269844 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
PRDM15-201ENST00000269844 DNAH6Q9C0G6 4158 aa5.81□□□□□ -1.48
PRDM15-201ENST00000269844 DNAH8Q96JB1 4490 aa5.78□□□□□ -1.48
PRDM15-201ENST00000269844 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
PRDM15-201ENST00000269844 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
PRDM15-201ENST00000269844 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
PRDM15-201ENST00000269844 HECTD4Q9Y4D8 3996 aa5.76□□□□□ -1.49
PRDM15-201ENST00000269844 KIAA1109Q2LD37 5005 aa5.76□□□□□ -1.49
PRDM15-201ENST00000269844 VPS13BQ7Z7G8 4022 aa5.74□□□□□ -1.49
PRDM15-201ENST00000269844 RYR2Q92736 4967 aa5.73□□□□□ -1.49
PRDM15-201ENST00000269844 RYR1P21817 5038 aa5.73□□□□□ -1.49
PRDM15-201ENST00000269844 FRAS1Q86XX4 4008 aa5.73□□□□□ -1.49
PRDM15-201ENST00000269844 RYR3Q15413 4870 aa5.73□□□□□ -1.49
PRDM15-201ENST00000269844 PKHD1P08F94 4074 aa5.69□□□□□ -1.5
PRDM15-201ENST00000269844 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
PRDM15-201ENST00000269844 KMT2CQ8NEZ4 4911 aaKnown RBP5.68□□□□□ -1.5
PRDM15-201ENST00000269844 APOBP04114 4563 aaKnown RBP5.67□□□□□ -1.5
PRDM15-201ENST00000269844 KRTAP17-1Q9BYP8 105 aa5.61□□□□□ -1.51
PRDM15-201ENST00000269844 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.52
PRDM15-201ENST00000269844 MYCBP2O75592 4640 aa5.55□□□□□ -1.52
PRDM15-201ENST00000269844 PKD1P98161 4303 aa5.53□□□□□ -1.52
PRDM15-201ENST00000269844 HSPG2P98160 4391 aa5.48□□□□□ -1.53
PRDM15-201ENST00000269844 FAT3Q8TDW7 4589 aa5.46□□□□□ -1.53
PRDM15-201ENST00000269844 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
PRDM15-201ENST00000269844 HERC2O95714 4834 aa5.41□□□□□ -1.54
PRDM15-201ENST00000269844 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
PRDM15-201ENST00000269844 EPPK1P58107 5090 aaKnown RBP5.4□□□□□ -1.55
PRDM15-201ENST00000269844 SPRR2GQ9BYE4 73 aa5.4□□□□□ -1.55
PRDM15-201ENST00000269844 KRTAP4-1Q9BYQ7 146 aa5.39□□□□□ -1.55
PRDM15-201ENST00000269844 MT1HP80294 61 aa5.39□□□□□ -1.55
PRDM15-201ENST00000269844 MT2AP02795 61 aa5.35□□□□□ -1.55
PRDM15-201ENST00000269844 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
PRDM15-201ENST00000269844 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.56
PRDM15-201ENST00000269844 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.56
PRDM15-201ENST00000269844 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
PRDM15-201ENST00000269844 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
PRDM15-201ENST00000269844 LRP2P98164 4655 aa5.25□□□□□ -1.57
PRDM15-201ENST00000269844 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
PRDM15-201ENST00000269844 MT1FP04733 61 aa5.17□□□□□ -1.58
PRDM15-201ENST00000269844 LPAP08519 4548 aa5.16□□□□□ -1.58
PRDM15-201ENST00000269844 PKHD1L1Q86WI1 4243 aa5.16□□□□□ -1.58
PRDM15-201ENST00000269844 TNXBP22105 4242 aa5.15□□□□□ -1.58
PRDM15-201ENST00000269844 KRTAP19-1Q8IUB9 90 aa5.06□□□□□ -1.6
PRDM15-201ENST00000269844 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
PRDM15-201ENST00000269844 HERC1Q15751 4861 aa5.02□□□□□ -1.61
PRDM15-201ENST00000269844 SPRR2EP22531 72 aa5□□□□□ -1.61
PRDM15-201ENST00000269844 SPRR2BP35325 72 aa5□□□□□ -1.61
PRDM15-201ENST00000269844 SPRR2AP35326 72 aa5□□□□□ -1.61
PRDM15-201ENST00000269844 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
PRDM15-201ENST00000269844 MT1XP80297 61 aa4.95□□□□□ -1.62
PRDM15-201ENST00000269844 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
PRDM15-201ENST00000269844 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
PRDM15-201ENST00000269844 SPRR2DP22532 72 aa4.86□□□□□ -1.63
PRDM15-201ENST00000269844 LCE2BO14633 110 aa4.85□□□□□ -1.63
PRDM15-201ENST00000269844 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
PRDM15-201ENST00000269844 MT1GP13640 62 aa4.8□□□□□ -1.64
PRDM15-201ENST00000269844 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
PRDM15-201ENST00000269844 MUC2Q02817 5179 aa4.77□□□□□ -1.65
PRDM15-201ENST00000269844 MT1BP07438 61 aa4.77□□□□□ -1.65
PRDM15-201ENST00000269844 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
PRDM15-201ENST00000269844 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
PRDM15-201ENST00000269844 HMCN2Q8NDA2 5059 aa4.75□□□□□ -1.65
PRDM15-201ENST00000269844 RNF213Q63HN8 5207 aa4.75□□□□□ -1.65
PRDM15-201ENST00000269844 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
PRDM15-201ENST00000269844 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
PRDM15-201ENST00000269844 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
PRDM15-201ENST00000269844 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
PRDM15-201ENST00000269844 PRM1P04553 51 aa4.68□□□□□ -1.66
PRDM15-201ENST00000269844 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
PRDM15-201ENST00000269844 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
PRDM15-201ENST00000269844 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
PRDM15-201ENST00000269844 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
PRDM15-201ENST00000269844 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms